RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 BIRC2Q13490 618 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 PWP1Q13610 501 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 DSG2Q14126 1118 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 ABRAXAS2Q15018 415 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 ZRSR2Q15696 482 aaKnown RBP4.7□□□□□ -1.66
LMNB1-208ENST00000504788 CCDC157Q569K6 752 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 XKR6Q5GH73 641 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 WASHC2DQ5SRD0 308 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 PHF19Q5T6S3 580 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 FRG2Q64ET8 278 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 CLEC6AQ6EIG7 209 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 RHBDD2Q6NTF9 364 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 MED25Q71SY5 747 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 COX15Q7KZN9 410 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 CUZD1Q86UP6 607 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 NUDCD3Q8IVD9 361 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 ANKRD42Q8N9B4 389 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 WDR36Q8NI36 951 aaKnown RBP4.7□□□□□ -1.66
LMNB1-208ENST00000504788 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.7□□□□□ -1.664e-14■■□□□ 14.2
LMNB1-208ENST00000504788 ZNF75CPQ92670 426 aaPredicted RBP4.7□□□□□ -1.66
LMNB1-208ENST00000504788 THAP11Q96EK4 314 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 MAELQ96JY0 434 aaKnown RBP4.7□□□□□ -1.66
LMNB1-208ENST00000504788 C3orf30Q96M34 536 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 LRFN5Q96NI6 719 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 ZNF317Q96PQ6 595 aaPredicted RBP4.7□□□□□ -1.66
LMNB1-208ENST00000504788 FRG2BQ96QU4 278 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 RUFY1Q96T51 708 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 CMKLR1Q99788 373 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 POLR1BQ9H9Y6 1135 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 KCNK13Q9HB14 408 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 KCNK9Q9NPC2 374 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 DMRT3Q9NQL9 472 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 PRDM7Q9NQW5 492 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 STARD5Q9NSY2 213 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 ABCF3Q9NUQ8 709 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 SIRT5Q9NXA8 310 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 MID2Q9UJV3 735 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 PLCL2Q9UPR0 1127 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 TIMM22Q9Y584 194 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 PTGDR2Q9Y5Y4 395 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 SLC22A7Q9Y694 548 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 PTPRQQ9UMZ3 2332 aa4.7□□□□□ -1.66
LMNB1-208ENST00000504788 IGLV3-12A0A075B6K2 115 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 TEX51A0A1B0GUA7 166 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 WDR91A4D1P6 747 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 TRABD2BA6NFA1 517 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 TMEM114B3SHH9 223 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 TMEM150CB9EJG8 249 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 TAF4O00268 1085 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 MANBAO00462 879 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 PLPP1O14494 284 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 TLX3O43711 291 aaPredicted RBP4.69□□□□□ -1.66
LMNB1-208ENST00000504788 OR1F1O43749 312 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 MLYCDO95822 493 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 PDYNP01213 254 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 STATHP02808 62 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 SERPINA6P08185 405 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 ALOX15P16050 662 aaPredicted RBP4.69□□□□□ -1.66
LMNB1-208ENST00000504788 GRK2P25098 689 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 GSTM2P28161 218 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 BSGP35613 385 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 SOX18P35713 384 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 MLLT3P42568 568 aaPredicted RBP4.69□□□□□ -1.66
LMNB1-208ENST00000504788 SLC1A6P48664 564 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 ATP1A2P50993 1020 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 CCNG1P51959 295 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 VSX2P58304 361 aaPredicted RBP4.69□□□□□ -1.66
LMNB1-208ENST00000504788 ABCE1P61221 599 aaKnown RBP4.69□□□□□ -1.66
LMNB1-208ENST00000504788 RAE1P78406 368 aaKnown RBP4.69□□□□□ -1.66
LMNB1-208ENST00000504788 ACY1Q03154 408 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 ZNF33BQ06732 778 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 CYP4F3Q08477 520 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 TUBB3Q13509 450 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 CUL3Q13618 768 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 TSTA3Q13630 321 aaPredicted RBP4.69□□□□□ -1.66
LMNB1-208ENST00000504788 FAM53BQ14153 422 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 NAA25Q14CX7 972 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 CPSF6Q16630 551 aaKnown RBP eCLIP4.69□□□□□ -1.66
LMNB1-208ENST00000504788 ZC3H12BQ5HYM0 836 aaKnown RBP4.69□□□□□ -1.66
LMNB1-208ENST00000504788 C3orf38Q5JPI3 329 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 MANEAQ5SRI9 462 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 DEPDC1Q5TB30 811 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 THEMIS2Q5TEJ8 643 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 MRM1Q6IN84 353 aaKnown RBP4.69□□□□□ -1.66
LMNB1-208ENST00000504788 ARMC6Q6NXE6 501 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 MRPL14Q6P1L8 145 aaKnown RBP4.69□□□□□ -1.66
LMNB1-208ENST00000504788 MED27Q6P2C8 311 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 GALNT18Q6P9A2 607 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 ABHD17CQ6PCB6 329 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 GPRIN3Q6ZVF9 776 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 CLNKQ7Z7G1 428 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 ASPGQ86U10 573 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 BPHLQ86WA6 291 aaPredicted RBP4.69□□□□□ -1.66
LMNB1-208ENST00000504788 DSELQ8IZU8 1212 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 CCNYL1Q8N7R7 359 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 CDYL2Q8N8U2 506 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 OR8K5Q8NH50 307 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 MGARPQ8TDB4 240 aa4.69□□□□□ -1.66
LMNB1-208ENST00000504788 UTP15Q8TED0 518 aaKnown RBP4.69□□□□□ -1.66
LMNB1-208ENST00000504788 SLC13A3Q8WWT9 602 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms