RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 OR56A1Q8NGH5 318 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 GPX8Q8TED1 209 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 SCARB1Q8WTV0 552 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 LPAR1Q92633 364 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 ZNF347Q96SE7 839 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 FEVQ99581 238 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 UBTD1Q9HAC8 227 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 IL26Q9NPH9 171 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 VANGL2Q9ULK5 521 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 ICKQ9UPZ9 632 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 EXOGQ9Y2C4 368 aaKnown RBP4.97□□□□□ -1.61
NIPBL-204ENST00000504430 INSL6Q9Y581 213 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 PTGDR2Q9Y5Y4 395 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 CXorf65A6NEN9 183 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 C3orf70A6NLC5 250 aaPredicted RBP4.96□□□□□ -1.61
NIPBL-204ENST00000504430 ARPC3O15145 178 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 PJA2O43164 708 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 PSMD3O43242 534 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 RHOBTB1O94844 696 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 SLC2A3P11169 496 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 MYL6BP14649 208 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 CPN1P15169 458 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 KCNJ4P48050 445 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 RGS19P49795 217 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 RGS7P49802 495 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 RWDD2BP57060 319 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 PMS2P3Q13401 168 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 VEZF1Q14119 521 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 MFSD13AQ14CX5 517 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 SLC5A12Q1EHB4 618 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 SAPCD1Q5SSQ6 148 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 NRARPQ7Z6K4 114 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 GCNT2Q8N0V5 402 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 CYB561A3Q8NBI2 242 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 GPRC5AQ8NFJ5 357 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 KCNG3Q8TAE7 436 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 ST8SIA1Q92185 356 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 NRGNQ92686 78 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 CERS2Q96G23 380 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 ZNF512Q96ME7 567 aaPredicted RBP4.96□□□□□ -1.61
NIPBL-204ENST00000504430 CINPQ9BW66 212 aaPredicted RBP4.96□□□□□ -1.61
NIPBL-204ENST00000504430 ADGRE3Q9BY15 652 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 DNTTIP1Q9H147 329 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 MAGEF1Q9HAY2 307 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 PSORS1C1Q9UIG5 152 aa4.96□□□□□ -1.61
NIPBL-204ENST00000504430 RUVBL2Q9Y230 463 aaKnown RBP4.96□□□□□ -1.61
NIPBL-204ENST00000504430 MATN3O15232 486 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 GPAA1O43292 621 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 PEX1O43933 1283 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 ADAP1O75689 374 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 IL6RP08887 468 aaPredicted RBP4.96□□□□□ -1.62
NIPBL-204ENST00000504430 ALPIP09923 528 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 CCL11P51671 97 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 JAK3P52333 1124 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 EEF1A1P68104 462 aaKnown RBP4.96□□□□□ -1.62
NIPBL-204ENST00000504430 EEF1A2Q05639 463 aaKnown RBP4.96□□□□□ -1.62
NIPBL-204ENST00000504430 TMEM62Q0P6H9 643 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 PRKD1Q15139 912 aaPredicted RBP4.96□□□□□ -1.62
NIPBL-204ENST00000504430 SNCBQ16143 134 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 SPATS1Q496A3 300 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 CCNYL2Q5T2Q4 361 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 EEF1A1P5Q5VTE0 462 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 DHRS7BQ6IAN0 325 aaPredicted RBP4.96□□□□□ -1.62
NIPBL-204ENST00000504430 CHSY1Q86X52 802 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 ZNF276Q8N554 614 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 GJC3Q8NFK1 279 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 LRRC20Q8TCA0 184 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 SCFD1Q8WVM8 642 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 ING5Q8WYH8 240 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 PBKQ96KB5 322 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 LRRC3BQ96PB8 259 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 ATG101Q9BSB4 218 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 SLC2A11Q9BYW1 496 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 AUNIPQ9H7T9 357 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 POT1Q9NUX5 634 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 MAP3K2Q9Y2U5 619 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 FHOD3Q2V2M9 1422 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 CARMIL1Q5VZK9 1371 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 PRSS37A4D1T9 235 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 VWC2LB2RUY7 222 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 F8W810 466 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 H3BMM5 538 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 SLC28A1O00337 649 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 PMPCBO75439 489 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 GPC4O75487 556 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 GSRP00390 522 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 EGFP01133 1207 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 CYP2D6P10635 497 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 ZNF26P17031 533 aaPredicted RBP4.96□□□□□ -1.62
NIPBL-204ENST00000504430 PPIFP30405 207 aaKnown RBP4.96□□□□□ -1.62
NIPBL-204ENST00000504430 CBX5P45973 191 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 CASP4P49662 377 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 OCA2Q04671 838 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 CALCOCO2Q13137 446 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 MAPK6Q16659 721 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 PRAMEF19Q5SWL8 479 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 DUS1LQ6P1R4 473 aaKnown RBP4.96□□□□□ -1.62
NIPBL-204ENST00000504430 C1orf94Q6P1W5 598 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 KCNIP4Q6PIL6 250 aa4.96□□□□□ -1.62
NIPBL-204ENST00000504430 VSTM1Q6UX27 236 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms