RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 CNOT2Q9NZN8 540 aaKnown RBP2.69□□□□□ -1.98
NEDD4-204ENST00000503468 ZIM2Q9NZV7 527 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 OPTCQ9UBM4 332 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 KIF25Q9UIL4 384 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 PLEKHA6Q9Y2H5 1048 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 CBY1Q9Y3M2 126 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 PPEF2O14830 753 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 ZBTB24O43167 697 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-204ENST00000503468 TPST1O60507 370 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 USP12O75317 370 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 LDOC1O95751 146 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-204ENST00000503468 CSF3P09919 207 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 DRD5P21918 477 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 KDELR1P24390 212 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 CD6P30203 668 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 GNA15P30679 374 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 SDC4P31431 198 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 NR4A2P43354 598 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 CLCQ05315 142 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 MAD2L1Q13257 205 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-204ENST00000503468 SNTA1Q13424 505 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 GPR50Q13585 617 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 PCBP2Q15366 365 aaKnown RBP eCLIP2.69□□□□□ -1.98
NEDD4-204ENST00000503468 TCTN1Q2MV58 587 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 SLC25A52Q3SY17 297 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 LCN1P1Q5VSP4 162 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 DESI1Q6ICB0 168 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 RFX6Q8HWS3 928 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 ABI1Q8IZP0 508 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 SLC43A2Q8N370 569 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 CADM2Q8N3J6 435 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 LRRC71Q8N4P6 559 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 CHDHQ8NE62 594 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF680Q8NEM1 530 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 OR4D10Q8NGI6 311 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 FBXO27Q8NI29 283 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 ZFP90Q8TF47 636 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 SMG7Q92540 1137 aaKnown RBP2.69□□□□□ -1.98
NEDD4-204ENST00000503468 ST6GAL2Q96JF0 529 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 Q96MT0 163 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 SPATA13Q96N96 652 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 MUS81Q96NY9 551 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 PSMG3-AS1Q96PY0 264 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 SMOQ99835 787 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF251Q9BRH9 671 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 ADPGKQ9BRR6 497 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 DGCR6LQ9BY27 220 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 POLR1EQ9GZS1 481 aaKnown RBP2.69□□□□□ -1.98
NEDD4-204ENST00000503468 IL22Q9GZX6 179 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 NTN4Q9HB63 628 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 SDR39U1Q9NRG7 319 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-204ENST00000503468 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.69□□□□□ -1.98
NEDD4-204ENST00000503468 UBQLN2Q9UHD9 624 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 CNOT6Q9ULM6 557 aaKnown RBP2.69□□□□□ -1.98
NEDD4-204ENST00000503468 AP4E1Q9UPM8 1137 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 EXO1Q9UQ84 846 aaKnown RBP2.69□□□□□ -1.98
NEDD4-204ENST00000503468 DNMT3AQ9Y6K1 912 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-204ENST00000503468 HRNRQ86YZ3 2850 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-204ENST00000503468 IQCMA0A1B0GVH7 501 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 RAB19A4D1S5 217 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 NBNO60934 754 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 TIPRLO75663 272 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 METTL18O95568 372 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 PSAPP07602 524 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 RAC2P15153 192 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 RPS4Y1P22090 263 aaKnown RBP2.69□□□□□ -1.98
NEDD4-204ENST00000503468 ALAS2P22557 587 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 ETFBP38117 255 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 GSK3BP49841 420 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 RHAGQ02094 409 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 SREBF2Q12772 1141 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 ELAVL2Q12926 359 aaKnown RBP2.69□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF273Q14593 569 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 PTGR1Q14914 329 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 POLD3Q15054 466 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-204ENST00000503468 SNRNP35Q16560 246 aaKnown RBP2.69□□□□□ -1.98
NEDD4-204ENST00000503468 PFKFB4Q16877 469 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 GPR158Q5T848 1215 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 KCNT2Q6UVM3 1135 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 GDPD3Q7L5L3 318 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 SSX9Q7RTT3 188 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 LHFPL3Q86UP9 236 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 JAZF1Q86VZ6 243 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 PHC2Q8IXK0 858 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 POF1BQ8WVV4 589 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 JDP2Q8WYK2 163 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 AKAP1Q92667 903 aaKnown RBP eCLIP2.69□□□□□ -1.98
NEDD4-204ENST00000503468 KCTD12Q96CX2 325 aaKnown RBP2.69□□□□□ -1.98
NEDD4-204ENST00000503468 EID2BQ96D98 161 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 TM4SF19Q96DZ7 209 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 RNF157Q96PX1 679 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 OR2M2Q96R28 347 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 PRRG3Q9BZD7 231 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 HMX1Q9NP08 348 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-204ENST00000503468 UCKL1Q9NWZ5 548 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF224Q9NZL3 707 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 HSPBP1Q9NZL4 362 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 MLXQ9UH92 298 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 CACNG2Q9Y698 323 aa2.69□□□□□ -1.98
NEDD4-204ENST00000503468 E2F8A0AVK6 867 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms