RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 MTERF1Q99551 399 aaKnown RBP11.16□□□□□ -0.62
USP46-204ENST00000503060 KXD1Q9BQD3 176 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 CHCHD6Q9BRQ6 235 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 OSBPL11Q9BXB4 747 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 RMND5AQ9H871 391 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 SGK2Q9HBY8 427 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 SERHLQ9NQF3 203 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 GPRC5BQ9NZH0 403 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 VPS29Q9UBQ0 182 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 LIMD1Q9UGP4 676 aa11.16□□□□□ -0.62
USP46-204ENST00000503060 RFXAPO00287 272 aa11.15□□□□□ -0.62
USP46-204ENST00000503060 SOCS2O14508 198 aa11.15□□□□□ -0.62
USP46-204ENST00000503060 LRATO95237 230 aa11.15□□□□□ -0.62
USP46-204ENST00000503060 DDX5P17844 614 aaKnown RBP11.15□□□□□ -0.62
USP46-204ENST00000503060 POLE2P56282 527 aa11.15□□□□□ -0.62
USP46-204ENST00000503060 PGS1Q32NB8 556 aa11.15□□□□□ -0.62
USP46-204ENST00000503060 CAPN13Q6MZZ7 669 aaPredicted RBP11.15□□□□□ -0.62
USP46-204ENST00000503060 ANKRD54Q6NXT1 300 aa11.15□□□□□ -0.62
USP46-204ENST00000503060 ADAMTSL4Q6UY14 1074 aa11.15□□□□□ -0.62
USP46-204ENST00000503060 TMEM184AQ6ZMB5 413 aa11.15□□□□□ -0.62
USP46-204ENST00000503060 TRMT11Q7Z4G4 463 aaKnown RBP11.15□□□□□ -0.62
USP46-204ENST00000503060 ZNF548Q8NEK5 533 aaPredicted RBP11.15□□□□□ -0.62
USP46-204ENST00000503060 OR9A1PQ8NGU1 263 aa11.15□□□□□ -0.62
USP46-204ENST00000503060 OR2L2Q8NH16 312 aa11.15□□□□□ -0.62
USP46-204ENST00000503060 OR10A6Q8NH74 314 aa11.15□□□□□ -0.62
USP46-204ENST00000503060 COX14Q96I36 57 aa11.15□□□□□ -0.62
USP46-204ENST00000503060 EGLN2Q96KS0 407 aa11.15□□□□□ -0.62
USP46-204ENST00000503060 GAL3ST1Q99999 423 aa11.15□□□□□ -0.62
USP46-204ENST00000503060 EBPLQ9BY08 206 aa11.15□□□□□ -0.62
USP46-204ENST00000503060 SLC6A13Q9NSD5 602 aa11.15□□□□□ -0.62
USP46-204ENST00000503060 PCDHGB4Q9UN71 923 aa11.15□□□□□ -0.62
USP46-204ENST00000503060 PCDHGB5Q9Y5G0 923 aa11.15□□□□□ -0.62
USP46-204ENST00000503060 PCDHGA11Q9Y5H2 935 aa11.15□□□□□ -0.62
USP46-204ENST00000503060 KCNE2Q9Y6J6 123 aa11.15□□□□□ -0.62
USP46-204ENST00000503060 STON1Q9Y6Q2 735 aa11.15□□□□□ -0.62
USP46-204ENST00000503060 MGAT4DA6NG13 374 aa11.15□□□□□ -0.63
USP46-204ENST00000503060 GMNNO75496 209 aa11.15□□□□□ -0.63
USP46-204ENST00000503060 APODP05090 189 aa11.15□□□□□ -0.63
USP46-204ENST00000503060 HEXBP07686 556 aa11.15□□□□□ -0.63
USP46-204ENST00000503060 CDH1P12830 882 aa11.15□□□□□ -0.63
USP46-204ENST00000503060 CDH3P22223 829 aa11.15□□□□□ -0.63
USP46-204ENST00000503060 DRD3P35462 400 aa11.15□□□□□ -0.63
USP46-204ENST00000503060 WASP42768 502 aa11.15□□□□□ -0.63
USP46-204ENST00000503060 TBPL1P62380 186 aa11.15□□□□□ -0.63
USP46-204ENST00000503060 E2F2Q14209 437 aa11.15□□□□□ -0.63
USP46-204ENST00000503060 GK3PQ14409 553 aa11.15□□□□□ -0.63
USP46-204ENST00000503060 Q3ZCU0 254 aa11.15□□□□□ -0.63
USP46-204ENST00000503060 SLC6A19Q695T7 634 aa11.15□□□□□ -0.63
USP46-204ENST00000503060 SLCO4C1Q6ZQN7 724 aa11.15□□□□□ -0.63
USP46-204ENST00000503060 MSANTD1Q6ZTZ1 278 aa11.15□□□□□ -0.63
USP46-204ENST00000503060 GATAD2AQ86YP4 633 aa11.15□□□□□ -0.63
USP46-204ENST00000503060 SYT12Q8IV01 421 aa11.15□□□□□ -0.63
USP46-204ENST00000503060 CHERPQ8IWX8 916 aaKnown RBP11.15□□□□□ -0.63
USP46-204ENST00000503060 CAMKK1Q8N5S9 505 aa11.15□□□□□ -0.63
USP46-204ENST00000503060 NEIL2Q969S2 332 aa11.15□□□□□ -0.63
USP46-204ENST00000503060 METTL2AQ96IZ6 378 aaKnown RBP11.15□□□□□ -0.63
USP46-204ENST00000503060 SEPHS2Q99611 448 aa11.15□□□□□ -0.63
USP46-204ENST00000503060 CPPED1Q9BRF8 314 aaPredicted RBP11.15□□□□□ -0.63
USP46-204ENST00000503060 INPP5KQ9BT40 448 aa11.15□□□□□ -0.63
USP46-204ENST00000503060 OSBPL6Q9BZF3 934 aa11.15□□□□□ -0.63
USP46-204ENST00000503060 DPEP2Q9H4A9 486 aa11.15□□□□□ -0.63
USP46-204ENST00000503060 BRF2Q9HAW0 419 aa11.15□□□□□ -0.63
USP46-204ENST00000503060 RUVBL1Q9Y265 456 aaKnown RBP11.15□□□□□ -0.63
USP46-204ENST00000503060 PCDHB14Q9Y5E9 798 aa11.15□□□□□ -0.63
USP46-204ENST00000503060 V9GYQ6 96 aa11.15□□□□□ -0.63
USP46-204ENST00000503060 GSTA4O15217 222 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 MID1O15344 667 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 HOXB9P17482 250 aaPredicted RBP11.14□□□□□ -0.63
USP46-204ENST00000503060 PRPS1L1P21108 318 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 ACADLP28330 430 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 GDI1P31150 447 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 HYAL1Q12794 435 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 ATP6AP1Q15904 470 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 RNF220Q5VTB9 566 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 ATG9BQ674R7 924 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 OR7E24Q6IFN5 339 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 FAM83HQ6ZRV2 1179 aaPredicted RBP11.14□□□□□ -0.63
USP46-204ENST00000503060 SPRED1Q7Z699 444 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 GPR180Q86V85 440 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 ANKRD46Q86W74 232 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 NKAIN4Q8IVV8 208 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 TMEM132CQ8N3T6 1108 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 CBR4Q8N4T8 237 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 PLPP7Q8NBV4 271 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 OR7G3Q8NG95 312 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 CHAC2Q8WUX2 184 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 GFM2Q969S9 779 aaKnown RBP11.14□□□□□ -0.63
USP46-204ENST00000503060 MRPL38Q96DV4 380 aaKnown RBP11.14□□□□□ -0.63
USP46-204ENST00000503060 GBP5Q96PP8 586 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 CENPKQ9BS16 269 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 C9orf16Q9BUW7 83 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 CHID1Q9BWS9 393 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 SGPP1Q9BX95 441 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 ZDHHC5Q9C0B5 715 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 GORASP2Q9H8Y8 452 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 MSRAQ9UJ68 235 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 INVSQ9Y283 1065 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 DYRK1BQ9Y463 629 aa11.14□□□□□ -0.63
USP46-204ENST00000503060 PCYT1BQ9Y5K3 369 aaPredicted RBP11.14□□□□□ -0.63
USP46-204ENST00000503060 DOCK8Q8NF50 2099 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms