RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 OR7A2PQ8NGA2 310 aa3.32□□□□□ -1.88
CALD1-224ENST00000498254 NUDCD2Q8WVJ2 157 aa3.32□□□□□ -1.88
CALD1-224ENST00000498254 HAS2Q92819 552 aa3.32□□□□□ -1.88
CALD1-224ENST00000498254 ULK4Q96C45 1275 aa3.32□□□□□ -1.88
CALD1-224ENST00000498254 ZNF577Q9BSK1 485 aa3.32□□□□□ -1.88
CALD1-224ENST00000498254 NTMT1Q9BV86 223 aa3.32□□□□□ -1.88
CALD1-224ENST00000498254 C6orf106Q9H6K1 298 aaPredicted RBP3.32□□□□□ -1.88
CALD1-224ENST00000498254 C10orf88Q9H8K7 445 aa3.32□□□□□ -1.88
CALD1-224ENST00000498254 LIN28AQ9H9Z2 209 aaKnown RBP3.32□□□□□ -1.88
CALD1-224ENST00000498254 MAGEF1Q9HAY2 307 aa3.32□□□□□ -1.88
CALD1-224ENST00000498254 FAM118AQ9NWS6 357 aa3.32□□□□□ -1.88
CALD1-224ENST00000498254 C19orf25Q9UFG5 118 aaPredicted RBP3.32□□□□□ -1.88
CALD1-224ENST00000498254 UBQLN2Q9UHD9 624 aa3.32□□□□□ -1.88
CALD1-224ENST00000498254 SH3GLB1Q9Y371 365 aa3.32□□□□□ -1.88
CALD1-224ENST00000498254 CLCA3PQ9Y6N3 262 aa3.32□□□□□ -1.88
CALD1-224ENST00000498254 ATP8B3O60423 1300 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 TRBV2A0A0J9YWF9 115 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 TRBV5-5A0A0J9YX44 114 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 A0A1W2PS18 150 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 TMEM129A0AVI4 362 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 ARHGAP42A6NI28 874 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 M0R296 226 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 MLNRO43193 412 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 SCO2O43819 266 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 PRKNO60260 465 aaPredicted RBP3.31□□□□□ -1.88
CALD1-224ENST00000498254 STBD1O95210 358 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 TSHBP01222 138 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 ATP1A1P05023 1023 aaKnown RBP3.31□□□□□ -1.88
CALD1-224ENST00000498254 SKILP12757 684 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 LIFP15018 202 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 CEACAM8P31997 349 aaPredicted RBP3.31□□□□□ -1.88
CALD1-224ENST00000498254 GLIPR1P48060 266 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 RPP38P78345 283 aaKnown RBP3.31□□□□□ -1.88
CALD1-224ENST00000498254 GAGE5Q13069 117 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 GAGE6Q13070 117 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 EXT1Q16394 746 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 ZC2HC1CQ53FD0 456 aaPredicted RBP3.31□□□□□ -1.88
CALD1-224ENST00000498254 WDR38Q5JTN6 314 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 C20orf194Q5TEA3 1177 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 LCN1P1Q5VSP4 162 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 ARHGEF16Q5VV41 709 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 GALNT17Q6IS24 598 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 UGT3A1Q6NUS8 523 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 C17orf107Q6ZR85 190 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 SLC24A5Q71RS6 500 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 CPEB2Q7Z5Q1 589 aaKnown RBP3.31□□□□□ -1.88
CALD1-224ENST00000498254 RCOR2Q8IZ40 523 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 CIARTQ8N365 385 aaPredicted RBP3.31□□□□□ -1.88
CALD1-224ENST00000498254 KDM8Q8N371 416 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 PRSS35Q8N3Z0 413 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 METTL27Q8N6F8 245 aaPredicted RBP3.31□□□□□ -1.88
CALD1-224ENST00000498254 MRPL43Q8N983 215 aaKnown RBP3.31□□□□□ -1.88
CALD1-224ENST00000498254 SLC37A3Q8NCC5 494 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 OR4C3Q8NH37 302 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 LMO3Q8TAP4 145 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 SPATA18Q8TC71 538 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 SEPT8Q92599 483 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 NSMCE2Q96MF7 247 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 MYCBPQ99417 103 aaPredicted RBP3.31□□□□□ -1.88
CALD1-224ENST00000498254 UBAC1Q9BSL1 405 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 RWDD1Q9H446 243 aaPredicted RBP3.31□□□□□ -1.88
CALD1-224ENST00000498254 KCNMB3Q9NPA1 279 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 NGBQ9NPG2 151 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.31□□□□□ -1.88
CALD1-224ENST00000498254 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.31□□□□□ -1.88
CALD1-224ENST00000498254 SH3BGRL2Q9UJC5 107 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 TMCC3Q9ULS5 477 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 KCNJ14Q9UNX9 436 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 AURKCQ9UQB9 309 aa3.31□□□□□ -1.88
CALD1-224ENST00000498254 FOXA2Q9Y261 457 aaPredicted RBP3.31□□□□□ -1.88
CALD1-224ENST00000498254 NPHP3Q7Z494 1330 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 TRBV4-1A0A0J9YWV2 114 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 SLC28A1O00337 649 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 EPHB6O15197 1021 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 B4GAT1O43505 415 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 PRDM1O75626 825 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 GRAP2O75791 330 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 AKR7A3O95154 331 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 FRMD6-AS1P0C7T7 363 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 IGHV4-38-2P0DP08 117 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 CD59P13987 128 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 IL10P22301 178 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 CA6P23280 308 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 MARK3P27448 753 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 RBMS1P29558 406 aaKnown RBP3.3□□□□□ -1.88
CALD1-224ENST00000498254 AKT2P31751 481 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 CHRNA3P32297 505 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 NR2C2P49116 596 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 CNN1P51911 297 aaKnown RBP3.3□□□□□ -1.88
CALD1-224ENST00000498254 KCNK10P57789 538 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 BTG1P62324 171 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 CDR2Q01850 454 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 GIT2Q14161 759 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 CEBPEQ15744 281 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 CARTPTQ16568 116 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 ZNF585BQ52M93 769 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 TECRLQ5HYJ1 363 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 LDLRAP1Q5SW96 308 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 DHRS11Q6UWP2 260 aa3.3□□□□□ -1.88
CALD1-224ENST00000498254 TMEM207Q6UWW9 146 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms