RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 HLCSP50747 726 aa15.42■□□□□ 0.06
VIM-208ENST00000497849 MLF1P58340 268 aa15.42■□□□□ 0.06
VIM-208ENST00000497849 ABRAXAS2Q15018 415 aa15.42■□□□□ 0.06
VIM-208ENST00000497849 NSDHLQ15738 373 aa15.42■□□□□ 0.06
VIM-208ENST00000497849 GXYLT1Q4G148 440 aa15.42■□□□□ 0.06
VIM-208ENST00000497849 FASTKD1Q53R41 847 aaKnown RBP15.42■□□□□ 0.06
VIM-208ENST00000497849 TSTD2Q5T7W7 516 aa15.42■□□□□ 0.06
VIM-208ENST00000497849 AADACL2Q6P093 401 aa15.42■□□□□ 0.06
VIM-208ENST00000497849 PAMR1Q6UXH9 720 aa15.42■□□□□ 0.06
VIM-208ENST00000497849 VN1R4Q7Z5H5 301 aa15.42■□□□□ 0.06
VIM-208ENST00000497849 OR52K1Q8NGK4 314 aa15.42■□□□□ 0.06
VIM-208ENST00000497849 OR5M3Q8NGP4 307 aa15.42■□□□□ 0.06
VIM-208ENST00000497849 OR9A1PQ8NGU1 263 aa15.42■□□□□ 0.06
VIM-208ENST00000497849 OR6P1Q8NGX9 317 aa15.42■□□□□ 0.06
VIM-208ENST00000497849 ALG3Q92685 438 aa15.42■□□□□ 0.06
VIM-208ENST00000497849 TMEM125Q96AQ2 219 aa15.42■□□□□ 0.06
VIM-208ENST00000497849 CALR3Q96L12 384 aaKnown RBP15.42■□□□□ 0.06
VIM-208ENST00000497849 MACROD1Q9BQ69 325 aa15.42■□□□□ 0.06
VIM-208ENST00000497849 LANCL2Q9NS86 450 aa15.42■□□□□ 0.06
VIM-208ENST00000497849 PNPLA3Q9NST1 481 aa15.42■□□□□ 0.06
VIM-208ENST00000497849 MARCH4Q9P2E8 410 aaPredicted RBP15.42■□□□□ 0.06
VIM-208ENST00000497849 ATRQ13535 2644 aa15.42■□□□□ 0.06
VIM-208ENST00000497849 TLN2Q9Y4G6 2542 aa15.41■□□□□ 0.06
VIM-208ENST00000497849 A0A0G2JNJ9 132 aa15.41■□□□□ 0.06
VIM-208ENST00000497849 CDC123O75794 336 aaPredicted RBP15.41■□□□□ 0.06
VIM-208ENST00000497849 HOXC12P31275 282 aa15.41■□□□□ 0.06
VIM-208ENST00000497849 ZFP36L2P47974 494 aaKnown RBP15.41■□□□□ 0.06
VIM-208ENST00000497849 COPS2P61201 443 aa15.41■□□□□ 0.06
VIM-208ENST00000497849 TSTA3Q13630 321 aaPredicted RBP15.41■□□□□ 0.06
VIM-208ENST00000497849 DEFB113Q30KQ7 82 aa15.41■□□□□ 0.06
VIM-208ENST00000497849 PTRHD1Q6GMV3 140 aaKnown RBP15.41■□□□□ 0.06
VIM-208ENST00000497849 OTOAQ7RTW8 1153 aa15.41■□□□□ 0.06
VIM-208ENST00000497849 PDSS2Q86YH6 399 aa15.41■□□□□ 0.06
VIM-208ENST00000497849 KRTAP1-3Q8IUG1 177 aa15.41■□□□□ 0.06
VIM-208ENST00000497849 SYCE1Q8N0S2 351 aa15.41■□□□□ 0.06
VIM-208ENST00000497849 SLC35F6Q8N357 371 aa15.41■□□□□ 0.06
VIM-208ENST00000497849 OR10Q1Q8NGQ4 319 aa15.41■□□□□ 0.06
VIM-208ENST00000497849 MCOLN3Q8TDD5 553 aa15.41■□□□□ 0.06
VIM-208ENST00000497849 FOPNLQ96NB1 174 aa15.41■□□□□ 0.06
VIM-208ENST00000497849 PANX3Q96QZ0 392 aa15.41■□□□□ 0.06
VIM-208ENST00000497849 TTYH2Q9BSA4 534 aa15.41■□□□□ 0.06
VIM-208ENST00000497849 RBCK1Q9BYM8 510 aa15.41■□□□□ 0.06
VIM-208ENST00000497849 OSBPL8Q9BZF1 889 aa15.41■□□□□ 0.06
VIM-208ENST00000497849 SLC6A16Q9GZN6 736 aa15.41■□□□□ 0.06
VIM-208ENST00000497849 DEFB127Q9H1M4 99 aa15.41■□□□□ 0.06
VIM-208ENST00000497849 UTP6Q9NYH9 597 aaKnown RBP15.41■□□□□ 0.06
VIM-208ENST00000497849 CRIM1Q9NZV1 1036 aa15.41■□□□□ 0.06
VIM-208ENST00000497849 Q9UFV3 132 aa15.41■□□□□ 0.06
VIM-208ENST00000497849 TSR3Q9UJK0 312 aaKnown RBP15.41■□□□□ 0.06
VIM-208ENST00000497849 RIMKLBQ9ULI2 386 aa15.41■□□□□ 0.06
VIM-208ENST00000497849 EDARQ9UNE0 448 aa15.41■□□□□ 0.06
VIM-208ENST00000497849 EFR3BQ9Y2G0 817 aa15.41■□□□□ 0.06
VIM-208ENST00000497849 PCDHA3Q9Y5H8 950 aa15.41■□□□□ 0.06
VIM-208ENST00000497849 FAM215AQ9Y5M1 114 aa15.41■□□□□ 0.06
VIM-208ENST00000497849 MPDZO75970 2070 aa15.4■□□□□ 0.06
VIM-208ENST00000497849 GOLGA6L9A6NEM1 432 aa15.4■□□□□ 0.06
VIM-208ENST00000497849 MAGEB17A8MXT2 336 aa15.4■□□□□ 0.06
VIM-208ENST00000497849 NPIPA2E9PIF3 369 aa15.4■□□□□ 0.06
VIM-208ENST00000497849 NPIPA3F8WFD2 350 aa15.4■□□□□ 0.06
VIM-208ENST00000497849 MYO1CO00159 1063 aa15.4■□□□□ 0.06
VIM-208ENST00000497849 ZNF500O60304 480 aaPredicted RBP15.4■□□□□ 0.06
VIM-208ENST00000497849 ATE1O95260 518 aa15.4■□□□□ 0.06
VIM-208ENST00000497849 GLI4P10075 376 aa15.4■□□□□ 0.06
VIM-208ENST00000497849 CTNNA1P35221 906 aaKnown RBP15.4■□□□□ 0.06
VIM-208ENST00000497849 PPARGP37231 505 aaPredicted RBP15.4■□□□□ 0.06
VIM-208ENST00000497849 KIR2DL3P43628 341 aa15.4■□□□□ 0.06
VIM-208ENST00000497849 OR4D2P58180 307 aa15.4■□□□□ 0.06
VIM-208ENST00000497849 GPR85P60893 370 aa15.4■□□□□ 0.06
VIM-208ENST00000497849 ANKRD20A4Q4UJ75 823 aa15.4■□□□□ 0.06
VIM-208ENST00000497849 TMEM214Q6NUQ4 689 aaKnown RBP15.4■□□□□ 0.06
VIM-208ENST00000497849 CXXC5Q7LFL8 322 aaKnown RBP15.4■□□□□ 0.06
VIM-208ENST00000497849 ADCK2Q7Z695 626 aa15.4■□□□□ 0.06
VIM-208ENST00000497849 FAM71DQ8N9W8 422 aa15.4■□□□□ 0.06
VIM-208ENST00000497849 PPFIBP2Q8ND30 876 aa15.4■□□□□ 0.06
VIM-208ENST00000497849 GOT1L1Q8NHS2 421 aaPredicted RBP15.4■□□□□ 0.06
VIM-208ENST00000497849 NUDT8Q8WV74 236 aa15.4■□□□□ 0.06
VIM-208ENST00000497849 CCDC138Q96M89 665 aa15.4■□□□□ 0.06
VIM-208ENST00000497849 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.4■□□□□ 0.06
VIM-208ENST00000497849 FEZF1A0PJY2 475 aa15.39■□□□□ 0.05
VIM-208ENST00000497849 A6NNC1 897 aa15.39■□□□□ 0.05
VIM-208ENST00000497849 H7BY64 318 aa15.39■□□□□ 0.05
VIM-208ENST00000497849 KPNA5O15131 536 aa15.39■□□□□ 0.05
VIM-208ENST00000497849 RDH16O75452 317 aa15.39■□□□□ 0.05
VIM-208ENST00000497849 CCNDBP1O95273 360 aa15.39■□□□□ 0.05
VIM-208ENST00000497849 RAF1P04049 648 aa15.39■□□□□ 0.05
VIM-208ENST00000497849 ACVR2AP27037 513 aa15.39■□□□□ 0.05
VIM-208ENST00000497849 ADH7P40394 386 aa15.39■□□□□ 0.05
VIM-208ENST00000497849 PNLIPRP1P54315 467 aa15.39■□□□□ 0.05
VIM-208ENST00000497849 GDF10P55107 478 aa15.39■□□□□ 0.05
VIM-208ENST00000497849 CDH17Q12864 832 aa15.39■□□□□ 0.05
VIM-208ENST00000497849 GBX1Q14549 363 aa15.39■□□□□ 0.05
VIM-208ENST00000497849 ARHGAP19Q14CB8 494 aa15.39■□□□□ 0.05
VIM-208ENST00000497849 MEI1Q5TIA1 1274 aa15.39■□□□□ 0.05
VIM-208ENST00000497849 RTL6Q6ICC9 239 aa15.39■□□□□ 0.05
VIM-208ENST00000497849 MDGA2Q7Z553 956 aa15.39■□□□□ 0.05
VIM-208ENST00000497849 ARMC10Q8N2F6 343 aa15.39■□□□□ 0.05
VIM-208ENST00000497849 OR5M9Q8NGP3 310 aa15.39■□□□□ 0.05
VIM-208ENST00000497849 PEX11GQ96HA9 241 aa15.39■□□□□ 0.05
VIM-208ENST00000497849 HES6Q96HZ4 224 aa15.39■□□□□ 0.05
VIM-208ENST00000497849 PRAP1Q96NZ9 151 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms