RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 WASHC2DQ5SRD0 308 aa18.83■□□□□ 0.6
SCAMP3-209ENST00000497470 FRMPD2BQ6IN97 320 aa18.83■□□□□ 0.6
SCAMP3-209ENST00000497470 CEACAM20Q6UY09 585 aa18.83■□□□□ 0.6
SCAMP3-209ENST00000497470 RAB11FIP2Q7L804 512 aa18.83■□□□□ 0.6
SCAMP3-209ENST00000497470 CSNK1A1LQ8N752 337 aa18.83■□□□□ 0.6
SCAMP3-209ENST00000497470 TWIST2Q8WVJ9 160 aa18.83■□□□□ 0.6
SCAMP3-209ENST00000497470 GAL3ST3Q96A11 431 aa18.83■□□□□ 0.6
SCAMP3-209ENST00000497470 CHMP6Q96FZ7 201 aa18.83■□□□□ 0.6
SCAMP3-209ENST00000497470 SMIM10Q96HG1 83 aa18.83■□□□□ 0.6
SCAMP3-209ENST00000497470 ZNF395Q9H8N7 513 aaPredicted RBP18.83■□□□□ 0.6
SCAMP3-209ENST00000497470 MEAF6Q9HAF1 191 aa18.83■□□□□ 0.6
SCAMP3-209ENST00000497470 SLCO1B3Q9NPD5 702 aa18.83■□□□□ 0.6
SCAMP3-209ENST00000497470 AHSPQ9NZD4 102 aa18.83■□□□□ 0.6
SCAMP3-209ENST00000497470 ADAM29Q9UKF5 820 aa18.83■□□□□ 0.6
SCAMP3-209ENST00000497470 ADAM21Q9UKJ8 722 aa18.83■□□□□ 0.6
SCAMP3-209ENST00000497470 CCL27Q9Y4X3 112 aa18.83■□□□□ 0.6
SCAMP3-209ENST00000497470 TIMM22Q9Y584 194 aa18.83■□□□□ 0.6
SCAMP3-209ENST00000497470 MDC1Q14676 2089 aaKnown RBP18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 A0A088AWK7 358 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 LOC105369274A0A096LPK9 316 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 LOC102723532A0A0G2JNH3 316 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 PLD2O14939 933 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 RGS14O43566 566 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 PRAMEF10O60809 474 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 SHOX2O60902 331 aaPredicted RBP18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 OR2B3O76000 313 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 SCELO95171 688 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 TBX6O95947 436 aaPredicted RBP18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 ONECUT2O95948 504 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 PDYNP01213 254 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 ZNF10P21506 573 aaPredicted RBP18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 LSP1P33241 339 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 HYAL2Q12891 473 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 HERC3Q15034 1050 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 KHDRBS2Q5VWX1 349 aaKnown RBP18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 TMEM214Q6NUQ4 689 aaKnown RBP18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 GALNT18Q6P9A2 607 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 PPP1R3BQ86XI6 285 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 OR4N4Q8N0Y3 316 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 TTC29Q8NA56 475 aaPredicted RBP18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 RCBTB1Q8NDN9 531 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 OR2L5Q8NG80 312 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 C11orf24Q96F05 449 aaPredicted RBP18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 LRFN5Q96NI6 719 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 TAAR9Q96RI9 348 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 KCNA7Q96RP8 456 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 TBCDQ9BTW9 1192 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 KLHL25Q9H0H3 589 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 RIC8BQ9NVN3 520 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 VPS29Q9UBQ0 182 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 WBP11Q9Y2W2 641 aaKnown RBP18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 TMED5Q9Y3A6 229 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 LOXL2Q9Y4K0 774 aa18.82■□□□□ 0.6
SCAMP3-209ENST00000497470 MAGEB17A8MXT2 336 aa18.81■□□□□ 0.6
SCAMP3-209ENST00000497470 FFAR3O14843 346 aa18.81■□□□□ 0.6
SCAMP3-209ENST00000497470 POLR1CO15160 346 aaPredicted RBP18.81■□□□□ 0.6
SCAMP3-209ENST00000497470 GPR42O15529 346 aa18.81■□□□□ 0.6
SCAMP3-209ENST00000497470 NRP2O60462 931 aa18.81■□□□□ 0.6
SCAMP3-209ENST00000497470 PCNAP12004 261 aa18.81■□□□□ 0.6
SCAMP3-209ENST00000497470 HOXD11P31277 338 aaPredicted RBP18.81■□□□□ 0.6
SCAMP3-209ENST00000497470 GSTM5P46439 218 aa18.81■□□□□ 0.6
SCAMP3-209ENST00000497470 VSX2P58304 361 aaPredicted RBP18.81■□□□□ 0.6
SCAMP3-209ENST00000497470 ABRAXAS2Q15018 415 aa18.81■□□□□ 0.6
SCAMP3-209ENST00000497470 MUM1Q2TAK8 710 aa18.81■□□□□ 0.6
SCAMP3-209ENST00000497470 CLEC6AQ6EIG7 209 aa18.81■□□□□ 0.6
SCAMP3-209ENST00000497470 ABHD13Q7L211 337 aa18.81■□□□□ 0.6
SCAMP3-209ENST00000497470 PLD3Q8IV08 490 aa18.81■□□□□ 0.6
SCAMP3-209ENST00000497470 CCT6BQ92526 530 aa18.81■□□□□ 0.6
SCAMP3-209ENST00000497470 MS4A6EQ96DS6 147 aa18.81■□□□□ 0.6
SCAMP3-209ENST00000497470 MAELQ96JY0 434 aaKnown RBP18.81■□□□□ 0.6
SCAMP3-209ENST00000497470 PPP3R2Q96LZ3 170 aa18.81■□□□□ 0.6
SCAMP3-209ENST00000497470 OR6C1Q96RD1 312 aa18.81■□□□□ 0.6
SCAMP3-209ENST00000497470 TRIM55Q9BYV6 548 aa18.81■□□□□ 0.6
SCAMP3-209ENST00000497470 NRSN2Q9GZP1 204 aa18.81■□□□□ 0.6
SCAMP3-209ENST00000497470 TUBB1Q9H4B7 451 aa18.81■□□□□ 0.6
SCAMP3-209ENST00000497470 ADAMTS20P59510 1910 aa18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 GMNCA6NCL1 334 aa18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 EFCAB7A8K855 629 aa18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 TMEM150CB9EJG8 249 aa18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 ZNF195O14628 629 aa18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 NDUFS4O43181 175 aa18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 DXOO77932 396 aaKnown RBP18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 TROVE2P10155 538 aaKnown RBP eCLIP18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 CYP4F3Q08477 520 aa18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 TARDBPQ13148 414 aaKnown RBP eCLIP18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 CCDC157Q569K6 752 aa18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 SPIN4Q56A73 249 aa18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 TMEM164Q5U3C3 297 aa18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 RHBDD2Q6NTF9 364 aa18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 PRMT9Q6P2P2 845 aa18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 Q6ZSR9 355 aa18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 MED25Q71SY5 747 aa18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 OR1L3Q8NH93 324 aa18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 PROKR1Q8TCW9 393 aa18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 RGMAQ96B86 450 aa18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 C19orf60Q96EN9 201 aa18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 QRFPRQ96P65 431 aa18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 KCNC2Q96PR1 638 aa18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 MTERF1Q99551 399 aaKnown RBP18.8■□□□□ 0.6
SCAMP3-209ENST00000497470 DPH2Q9BQC3 489 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms