RNA–Protein interactions for RNA: ENST00000496659.1

C4A-258, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-258ENST00000496659 KLHL25Q9H0H3 589 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 SPNS1Q9H2V7 528 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 LRTM1Q9HBL6 345 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 TNFRSF12AQ9NP84 129 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 IRAK4Q9NWZ3 460 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 PDP2Q9P2J9 529 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 VPS29Q9UBQ0 182 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 PILRAQ9UKJ1 303 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 SLC12A4Q9UP95 1085 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 KLHL20Q9Y2M5 609 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 ARL2BPQ9Y2Y0 163 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 USP24Q9UPU5 2620 aa9.54□□□□□ -0.88
C4A-258ENST00000496659 KMT2BQ9UMN6 2715 aaPredicted RBP9.53□□□□□ -0.88
C4A-258ENST00000496659 IGHV5-51A0A0C4DH38 117 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 IGHV5-10-1A0A0J9YXX1 117 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 MAGEB17A8MXT2 336 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 NPIPB8E9PQR5 432 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 SDHDO14521 159 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 KIF1CO43896 1103 aaKnown RBP9.53□□□□□ -0.88
C4A-258ENST00000496659 DCTN3O75935 186 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 PRPH2P23942 346 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 EPHA3P29320 983 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 CCKBRP32239 447 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 CSTF2P33240 577 aaKnown RBP eCLIP9.53□□□□□ -0.88
C4A-258ENST00000496659 TSFMP43897 325 aaKnown RBP9.53□□□□□ -0.88
C4A-258ENST00000496659 IDH3AP50213 366 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 NOVA1P51513 510 aaKnown RBP9.53□□□□□ -0.88
C4A-258ENST00000496659 NEK2P51955 445 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 STX1BP61266 288 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 ACSM2AQ08AH3 577 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 NDUFA9Q16795 377 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 CCDC157Q569K6 752 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 KHDRBS2Q5VWX1 349 aaKnown RBP9.53□□□□□ -0.88
C4A-258ENST00000496659 METTL21CQ5VZV1 264 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 ACSM2BQ68CK6 577 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 OGFOD2Q6N063 350 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 CGB2Q6NT52 195 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 ABHD13Q7L211 337 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 SPATA19Q7Z5L4 167 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 NUDT13Q86X67 352 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 PLD3Q8IV08 490 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 GPR135Q8IZ08 494 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 CACNA2D3Q8IZS8 1091 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 D2HGDHQ8N465 521 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 CSNK1A1LQ8N752 337 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 ANKRD53Q8N9V6 530 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 FNDC5Q8NAU1 212 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 DEFB124Q8NES8 71 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 OR8K5Q8NH50 307 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 RFWD2Q8NHY2 731 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 C10orf82Q8WW14 230 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 PPP1R36Q96LQ0 422 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 PPM1MQ96MI6 270 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 DEPDC7Q96QD5 511 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 OR2A5Q96R48 311 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 HBEGFQ99075 208 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 MS4A8Q9BY19 250 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 ACPTQ9BZG2 426 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 REXO4Q9GZR2 422 aaKnown RBP9.53□□□□□ -0.88
C4A-258ENST00000496659 TUBB1Q9H4B7 451 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 RABEP2Q9H5N1 569 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 COPS7BQ9H9Q2 264 aaPredicted RBP9.53□□□□□ -0.88
C4A-258ENST00000496659 C1orf109Q9NX04 203 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 TMEM9Q9P0T7 183 aa9.53□□□□□ -0.88
C4A-258ENST00000496659 EIF3LQ9Y262 564 aaKnown RBP9.53□□□□□ -0.88
C4A-258ENST00000496659 ATP6AP2A0A1C7CYW4 349 aa9.52□□□□□ -0.89
C4A-258ENST00000496659 ARHGAP10A1A4S6 786 aa9.52□□□□□ -0.89
C4A-258ENST00000496659 A8MU76 341 aa9.52□□□□□ -0.89
C4A-258ENST00000496659 H0YGG7 62 aa9.52□□□□□ -0.89
C4A-258ENST00000496659 ZNF195O14628 629 aa9.52□□□□□ -0.89
C4A-258ENST00000496659 LSM1O15116 133 aaKnown RBP9.52□□□□□ -0.89
C4A-258ENST00000496659 CCDC22O60826 627 aa9.52□□□□□ -0.89
C4A-258ENST00000496659 CTSVO60911 334 aa9.52□□□□□ -0.89
C4A-258ENST00000496659 SEC22BO75396 215 aa9.52□□□□□ -0.89
C4A-258ENST00000496659 ATP6AP2O75787 350 aa9.52□□□□□ -0.89
C4A-258ENST00000496659 TGFB1P01137 390 aa9.52□□□□□ -0.89
C4A-258ENST00000496659 EIF2S1P05198 315 aaKnown RBP9.52□□□□□ -0.89
C4A-258ENST00000496659 JUNP05412 331 aaKnown RBP9.52□□□□□ -0.89
C4A-258ENST00000496659 IGF2RP11717 2491 aa9.52□□□□□ -0.89
C4A-258ENST00000496659 CEACAM1P13688 526 aa9.52□□□□□ -0.89
C4A-258ENST00000496659 HOXB3P14651 431 aaPredicted RBP9.52□□□□□ -0.89
C4A-258ENST00000496659 ACPPP15309 386 aa9.52□□□□□ -0.89
C4A-258ENST00000496659 SPINK2P20155 84 aa9.52□□□□□ -0.89
C4A-258ENST00000496659 GSTM5P46439 218 aa9.52□□□□□ -0.89
C4A-258ENST00000496659 SEPHS1P49903 392 aa9.52□□□□□ -0.89
C4A-258ENST00000496659 VSX2P58304 361 aaPredicted RBP9.52□□□□□ -0.89
C4A-258ENST00000496659 ARF3P61204 181 aaPredicted RBP9.52□□□□□ -0.89
C4A-258ENST00000496659 ERVK-8P63133 956 aa9.52□□□□□ -0.89
C4A-258ENST00000496659 RPL38P63173 70 aaKnown RBP9.52□□□□□ -0.89
C4A-258ENST00000496659 HMGCS1Q01581 520 aa9.52□□□□□ -0.89
C4A-258ENST00000496659 CFHR1Q03591 330 aa9.52□□□□□ -0.89
C4A-258ENST00000496659 GABPB1Q06547 395 aaPredicted RBP9.52□□□□□ -0.89
C4A-258ENST00000496659 TUBB3Q13509 450 aa9.52□□□□□ -0.89
C4A-258ENST00000496659 GRM7Q14831 915 aa9.52□□□□□ -0.89
C4A-258ENST00000496659 ZIC1Q15915 447 aa9.52□□□□□ -0.89
C4A-258ENST00000496659 AP5B1Q2VPB7 878 aa9.52□□□□□ -0.89
C4A-258ENST00000496659 DEFB110Q30KQ9 67 aa9.52□□□□□ -0.89
C4A-258ENST00000496659 GALNTL6Q49A17 601 aa9.52□□□□□ -0.89
C4A-258ENST00000496659 SLC9B1Q4ZJI4 515 aa9.52□□□□□ -0.89
C4A-258ENST00000496659 TOR1AIP1Q5JTV8 583 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms