RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 PIAS1O75925 651 aa13.47□□□□□ -0.25
VTI1A-209ENST00000496445 SEC24DO94855 1032 aaPredicted RBP13.47□□□□□ -0.25
VTI1A-209ENST00000496445 WISP3O95389 354 aaPredicted RBP13.47□□□□□ -0.25
VTI1A-209ENST00000496445 B3GALT4O96024 378 aa13.47□□□□□ -0.25
VTI1A-209ENST00000496445 F10P00742 488 aa13.47□□□□□ -0.25
VTI1A-209ENST00000496445 CYC1P08574 325 aa13.47□□□□□ -0.25
VTI1A-209ENST00000496445 PAFAH1B1P43034 410 aa13.47□□□□□ -0.25
VTI1A-209ENST00000496445 SCTRP47872 440 aa13.47□□□□□ -0.25
VTI1A-209ENST00000496445 TAS2R39P59534 338 aa13.47□□□□□ -0.25
VTI1A-209ENST00000496445 REEP5Q00765 189 aa13.47□□□□□ -0.25
VTI1A-209ENST00000496445 RHAGQ02094 409 aa13.47□□□□□ -0.25
VTI1A-209ENST00000496445 RPUSD3Q6P087 351 aaKnown RBP13.47□□□□□ -0.25
VTI1A-209ENST00000496445 CAPN12Q6ZSI9 719 aa13.47□□□□□ -0.25
VTI1A-209ENST00000496445 CPEB2Q7Z5Q1 589 aaKnown RBP13.47□□□□□ -0.25
VTI1A-209ENST00000496445 ANKRD37Q7Z713 158 aa13.47□□□□□ -0.25
VTI1A-209ENST00000496445 CEP97Q8IW35 865 aa13.47□□□□□ -0.25
VTI1A-209ENST00000496445 ZBED8Q8IZ13 594 aa13.47□□□□□ -0.25
VTI1A-209ENST00000496445 OR1N1Q8NGS0 311 aa13.47□□□□□ -0.25
VTI1A-209ENST00000496445 FAR1Q8WVX9 515 aa13.47□□□□□ -0.25
VTI1A-209ENST00000496445 ATL1Q8WXF7 558 aa13.47□□□□□ -0.25
VTI1A-209ENST00000496445 CYTH2Q99418 400 aa13.47□□□□□ -0.25
VTI1A-209ENST00000496445 SLX1AQ9BQ83 275 aa13.47□□□□□ -0.25
VTI1A-209ENST00000496445 TRIM54Q9BYV2 358 aa13.47□□□□□ -0.25
VTI1A-209ENST00000496445 FAM129AQ9BZQ8 928 aa13.47□□□□□ -0.25
VTI1A-209ENST00000496445 LANCL2Q9NS86 450 aa13.47□□□□□ -0.25
VTI1A-209ENST00000496445 PABPN1LA6NDY0 278 aaKnown RBP13.46□□□□□ -0.25
VTI1A-209ENST00000496445 C4orf51C9J302 202 aa13.46□□□□□ -0.25
VTI1A-209ENST00000496445 GALR3O60755 368 aaPredicted RBP13.46□□□□□ -0.25
VTI1A-209ENST00000496445 CDC123O75794 336 aaPredicted RBP13.46□□□□□ -0.25
VTI1A-209ENST00000496445 WFS1O76024 890 aa13.46□□□□□ -0.25
VTI1A-209ENST00000496445 WDPCPO95876 746 aa13.46□□□□□ -0.25
VTI1A-209ENST00000496445 EDN3P14138 238 aa13.46□□□□□ -0.25
VTI1A-209ENST00000496445 OLR1P78380 273 aa13.46□□□□□ -0.25
VTI1A-209ENST00000496445 PWP1Q13610 501 aa13.46□□□□□ -0.25
VTI1A-209ENST00000496445 ELOAQ14241 798 aaKnown RBP13.46□□□□□ -0.25
VTI1A-209ENST00000496445 HERC3Q15034 1050 aa13.46□□□□□ -0.25
VTI1A-209ENST00000496445 ZNF324BQ6AW86 544 aaPredicted RBP13.46□□□□□ -0.25
VTI1A-209ENST00000496445 THOC6Q86W42 341 aaKnown RBP13.46□□□□□ -0.25
VTI1A-209ENST00000496445 NKAPQ8N5F7 415 aaKnown RBP13.46□□□□□ -0.25
VTI1A-209ENST00000496445 ANKRD53Q8N9V6 530 aa13.46□□□□□ -0.25
VTI1A-209ENST00000496445 NT5CQ8TCD5 201 aa13.46□□□□□ -0.25
VTI1A-209ENST00000496445 METTL21AQ8WXB1 218 aa13.46□□□□□ -0.25
VTI1A-209ENST00000496445 HAS2Q92819 552 aa13.46□□□□□ -0.25
VTI1A-209ENST00000496445 TSLPQ969D9 159 aa13.46□□□□□ -0.25
VTI1A-209ENST00000496445 PEX11GQ96HA9 241 aa13.46□□□□□ -0.25
VTI1A-209ENST00000496445 VPS39Q96JC1 886 aa13.46□□□□□ -0.25
VTI1A-209ENST00000496445 TAAR6Q96RI8 345 aa13.46□□□□□ -0.25
VTI1A-209ENST00000496445 AICDAQ9GZX7 198 aa13.46□□□□□ -0.25
VTI1A-209ENST00000496445 RHOJQ9H4E5 214 aa13.46□□□□□ -0.25
VTI1A-209ENST00000496445 RNF14Q9UBS8 474 aa13.46□□□□□ -0.25
VTI1A-209ENST00000496445 SLC5A6Q9Y289 635 aa13.46□□□□□ -0.25
VTI1A-209ENST00000496445 TRAV17A0A0B4J275 112 aa13.45□□□□□ -0.26
VTI1A-209ENST00000496445 DYTNA2CJ06 578 aa13.45□□□□□ -0.26
VTI1A-209ENST00000496445 RAD51CO43502 376 aa13.45□□□□□ -0.26
VTI1A-209ENST00000496445 CLDN1O95832 211 aa13.45□□□□□ -0.26
VTI1A-209ENST00000496445 DDAH2O95865 285 aa13.45□□□□□ -0.26
VTI1A-209ENST00000496445 ALOX12P18054 663 aa13.45□□□□□ -0.26
VTI1A-209ENST00000496445 TDGF1P3P51864 188 aa13.45□□□□□ -0.26
VTI1A-209ENST00000496445 CDKL1Q00532 357 aa13.45□□□□□ -0.26
VTI1A-209ENST00000496445 HYAL2Q12891 473 aa13.45□□□□□ -0.26
VTI1A-209ENST00000496445 TSNQ15631 228 aaKnown RBP13.45□□□□□ -0.26
VTI1A-209ENST00000496445 C18orf21Q32NC0 220 aaPredicted RBP13.45□□□□□ -0.26
VTI1A-209ENST00000496445 DEFB134Q4QY38 66 aa13.45□□□□□ -0.26
VTI1A-209ENST00000496445 PLAG1Q6DJT9 500 aa13.45□□□□□ -0.26
VTI1A-209ENST00000496445 FAM180AQ6UWF9 173 aa13.45□□□□□ -0.26
VTI1A-209ENST00000496445 TMPRSS11BQ86T26 416 aa13.45□□□□□ -0.26
VTI1A-209ENST00000496445 UTP15Q8TED0 518 aaKnown RBP13.45□□□□□ -0.26
VTI1A-209ENST00000496445 ANKRD7Q92527 254 aa13.45□□□□□ -0.26
VTI1A-209ENST00000496445 OR1F2PQ96R84 312 aa13.45□□□□□ -0.26
VTI1A-209ENST00000496445 RNF32Q9H0A6 362 aa13.45□□□□□ -0.26
VTI1A-209ENST00000496445 DPH5Q9H2P9 285 aa13.45□□□□□ -0.26
VTI1A-209ENST00000496445 PELI2Q9HAT8 420 aa13.45□□□□□ -0.26
VTI1A-209ENST00000496445 GRHL1Q9NZI5 618 aa13.45□□□□□ -0.26
VTI1A-209ENST00000496445 C19orf25Q9UFG5 118 aaPredicted RBP13.45□□□□□ -0.26
VTI1A-209ENST00000496445 ZFP69BQ9UJL9 534 aa13.45□□□□□ -0.26
VTI1A-209ENST00000496445 SLC22A14Q9Y267 594 aa13.45□□□□□ -0.26
VTI1A-209ENST00000496445 OARD1Q9Y530 152 aa13.45□□□□□ -0.26
VTI1A-209ENST00000496445 CXorf49A8MYA2 514 aaPredicted RBP13.44□□□□□ -0.26
VTI1A-209ENST00000496445 C1QAP02745 245 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 SERPIND1P05546 499 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 UQCRHP07919 91 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 FHP07954 510 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 ZNF888P0CJ79 500 aaPredicted RBP13.44□□□□□ -0.26
VTI1A-209ENST00000496445 ICAM2P13598 275 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 SSTR1P30872 391 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 AHRP35869 848 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 SLC6A12P48065 614 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 AP2B1P63010 937 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 ZNF33BQ06732 778 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 C2orf54Q08AI8 447 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 CSHL1Q14406 222 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 ABRAXAS2Q15018 415 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 INAQ16352 499 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 BTBD16Q32M84 506 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 NXPE4Q6UWF7 544 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 ADAMTSL2Q86TH1 951 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 KLHDC8AQ8IYD2 350 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 BCORP1Q8N888 145 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 PLPP5Q8NEB5 264 aa13.44□□□□□ -0.26
VTI1A-209ENST00000496445 SPATA4Q8NEY3 305 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms