RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 NT5C3AQ9H0P0 336 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 C5orf66Q9H5L9 145 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 SLC52A3Q9NQ40 469 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 DCAF16Q9NXF7 216 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 TAS2R3Q9NYW6 316 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 PKD2L2Q9NZM6 624 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 ACTR3BQ9P1U1 418 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 ZNF624Q9P2J8 865 aaPredicted RBP3.31□□□□□ -1.88
CLK1-214ENST00000496205 EXTL2Q9UBQ6 330 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 TBK1Q9UHD2 729 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 APPL1Q9UKG1 709 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 RUVBL2Q9Y230 463 aaKnown RBP3.31□□□□□ -1.88
CLK1-214ENST00000496205 CHKBQ9Y259 395 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 KIF3AQ9Y496 699 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 A0A0B4J203 849 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 ILVBLA1L0T0 632 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 GLTPD2A6NH11 291 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 SDR42E2A6NKP2 422 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 O00370 1275 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 GLCEO94923 617 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 MOCS2O96007 188 aaPredicted RBP3.3□□□□□ -1.88
CLK1-214ENST00000496205 ATP1B1P05026 303 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 HEXBP07686 556 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 SP9P0CG40 484 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 MYL6BP14649 208 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 GOT1P17174 413 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 ARF4P18085 180 aaPredicted RBP3.3□□□□□ -1.88
CLK1-214ENST00000496205 CA6P23280 308 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 PIK3R1P27986 724 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 PRPHP41219 470 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 TKTL1P51854 596 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 LBX1P52954 281 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 KIAA1024LP59773 190 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 GMFBP60983 142 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 HMGN5P82970 282 aaKnown RBP3.3□□□□□ -1.88
CLK1-214ENST00000496205 IL10RBQ08334 325 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 CCDC6Q16204 474 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 SGCBQ16585 318 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 ANKDD1AQ495B1 522 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 PM20D1Q6GTS8 502 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 FAM53AQ6NSI3 398 aaPredicted RBP3.3□□□□□ -1.88
CLK1-214ENST00000496205 TTC27Q6P3X3 843 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 CTR9Q6PD62 1173 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 TMEM207Q6UWW9 146 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 CROCCP3Q8IVE0 287 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 SIAH3Q8IW03 269 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 ZC3H3Q8IXZ2 948 aaKnown RBP3.3□□□□□ -1.88
CLK1-214ENST00000496205 CCDC63Q8NA47 563 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 NOA1Q8NC60 698 aaKnown RBP3.3□□□□□ -1.88
CLK1-214ENST00000496205 CNNM3Q8NE01 707 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 TRIM58Q8NG06 486 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 ZNF606Q8WXB4 792 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 TMEM143Q96AN5 459 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 TRIM44Q96DX7 344 aaPredicted RBP3.3□□□□□ -1.88
CLK1-214ENST00000496205 UHRF2Q96PU4 802 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 RASL10BQ96S79 203 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 NYXQ9GZU5 481 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 ABCG8Q9H221 673 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 CPVLQ9H3G5 476 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 ATP13A3Q9H7F0 1226 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 ZNF334Q9HCZ1 680 aaPredicted RBP3.3□□□□□ -1.88
CLK1-214ENST00000496205 POLE3Q9NRF9 147 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.3□□□□□ -1.88
CLK1-214ENST00000496205 RABL2BQ9UNT1 228 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 PIN4Q9Y237 131 aaKnown RBP3.3□□□□□ -1.88
CLK1-214ENST00000496205 AP1M2Q9Y6Q5 423 aa3.3□□□□□ -1.88
CLK1-214ENST00000496205 SYNRGQ9UMZ2 1314 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 IGKV3D-20A0A0C4DH25 116 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 ANKDD1BA6NHY2 528 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 SLC9B1P1A6NJY1 282 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 E5RGE8 158 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 MLNRO43193 412 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 VEGFDO43915 354 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 FGF17O60258 216 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 DFFBO76075 338 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 TRIM16O95361 564 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 FAM157CP0CG43 387 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 VCLP18206 1134 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 LUMP51884 338 aaPredicted RBP3.29□□□□□ -1.88
CLK1-214ENST00000496205 POLR2FP61218 127 aaKnown RBP3.29□□□□□ -1.88
CLK1-214ENST00000496205 ERVK11-1P61568 191 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 SULT2A1Q06520 285 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 RPS6KA1Q15418 735 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 TRADDQ15628 312 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 RBBP7Q16576 425 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 AARDQ4LEZ3 155 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 SPOUT1Q5T280 376 aaKnown RBP3.29□□□□□ -1.88
CLK1-214ENST00000496205 KDELC1Q6UW63 502 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 SLC26A9Q7LBE3 791 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 GPR141Q7Z602 305 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 APLFQ8IW19 511 aaPredicted RBP3.29□□□□□ -1.88
CLK1-214ENST00000496205 KLHDC8AQ8IYD2 350 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 TBC1D21Q8IYX1 336 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 CLYBLQ8N0X4 340 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 ZNF540Q8NDQ6 660 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 FAM46BQ96A09 425 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 PGM2Q96G03 612 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 VPS39Q96JC1 886 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 NEDD4LQ96PU5 975 aa3.29□□□□□ -1.88
CLK1-214ENST00000496205 GAL3ST4Q96RP7 486 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms