RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 CTU2Q2VPK5 515 aaKnown RBP10.64□□□□□ -0.71
CMSS1-208ENST00000496116 CRTC3Q6UUV7 619 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 ARHGAP22Q7Z5H3 698 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 GALNT5Q7Z7M9 940 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 GALNT10Q86SR1 603 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 CYP4Z1Q86W10 505 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 ZNF547Q8IVP9 402 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 LRRC56Q8IYG6 542 aaPredicted RBP10.64□□□□□ -0.71
CMSS1-208ENST00000496116 GOT1L1Q8NHS2 421 aaPredicted RBP10.64□□□□□ -0.71
CMSS1-208ENST00000496116 RAB2BQ8WUD1 216 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 SUSD6Q92537 303 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 RAB7BQ96AH8 199 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 FAM129BQ96TA1 746 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 APOL4Q9BPW4 351 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 TMEM245Q9H330 911 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 RIBC2Q9H4K1 309 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 ASF1AQ9Y294 204 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 TRIM64BA6NI03 449 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 HEPACAM2A8MVW5 462 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 ANGPTL1O95841 491 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 NUDT7P0C024 238 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 KELP23276 732 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 ACADLP28330 430 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 CRATP43155 626 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 DAPP51397 102 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 RPA4Q13156 261 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 CDK5R2Q13319 367 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 GAB1Q13480 694 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 CAMK2GQ13555 558 aaPredicted RBP10.64□□□□□ -0.71
CMSS1-208ENST00000496116 RAPSNQ13702 412 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 FAM78AQ5JUQ0 283 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 PRAMEF14Q5SWL7 426 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.64□□□□□ -0.71
CMSS1-208ENST00000496116 PRAMEF13Q5VWM6 474 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 CEP68Q76N32 757 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 CROCCP3Q8IVE0 287 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 KRT78Q8N1N4 520 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 ATG16L2Q8NAA4 619 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 BPIFB6Q8NFQ5 453 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.64□□□□□ -0.71
CMSS1-208ENST00000496116 FBLIM1Q8WUP2 373 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 SMARCD2Q92925 531 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 PPCDCQ96CD2 204 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 MTERF3Q96E29 417 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 ASB16Q96NS5 453 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 SAMD11Q96NU1 681 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 NODALQ96S42 347 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 DOHHQ9BU89 302 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 TMEM106CQ9BVX2 250 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 LHPPQ9H008 270 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 MTIF3Q9H2K0 278 aaKnown RBP10.64□□□□□ -0.71
CMSS1-208ENST00000496116 MYNNQ9NPC7 610 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 THUMPD1Q9NXG2 353 aaKnown RBP10.64□□□□□ -0.71
CMSS1-208ENST00000496116 ETAA1Q9NY74 926 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 SH2B3Q9UQQ2 575 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 PADI2Q9Y2J8 665 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 TSC22D4Q9Y3Q8 395 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 GMPPBQ9Y5P6 360 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 MUC22E2RYF6 1773 aaPredicted RBP10.64□□□□□ -0.71
CMSS1-208ENST00000496116 DENND4AQ7Z401 1863 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 TBC1D3BA6NDS4 549 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 M0QX08 132 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 PLK4O00444 970 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 MITFO75030 526 aaPredicted RBP10.63□□□□□ -0.71
CMSS1-208ENST00000496116 DIRAS1O95057 198 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 C9P02748 559 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 RPN2P04844 631 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 FURINP09958 794 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 AGXTP21549 392 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 MATN1P21941 496 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 PTX3P26022 381 aaPredicted RBP10.63□□□□□ -0.71
CMSS1-208ENST00000496116 HBA1P69905 142 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 RBBP4Q09028 425 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 FCHO2Q0JRZ9 810 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 C2orf80Q0P641 193 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 FADDQ13158 208 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 C16orf72Q14CZ0 275 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 CYP2A13Q16696 494 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 LCTLQ6UWM7 567 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 TMC5Q6UXY8 1006 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 ARMCX6Q7L4S7 300 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 SPRED2Q7Z698 418 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 AMZ2Q86W34 360 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 MMAAQ8IVH4 418 aaKnown RBP10.63□□□□□ -0.71
CMSS1-208ENST00000496116 DCUN1D3Q8IWE4 304 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 NAGSQ8N159 534 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 METTL4Q8N3J2 472 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 TTC29Q8NA56 475 aaPredicted RBP10.63□□□□□ -0.71
CMSS1-208ENST00000496116 OR4K1Q8NGD4 311 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 C16orf78Q8WTQ4 265 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 EPYCQ99645 322 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 SLC35A5Q9BS91 424 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 HDAC8Q9BY41 377 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 ZDHHC5Q9C0B5 715 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 OR51B5Q9H339 312 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 RAD21L1Q9H4I0 556 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 OCEL1Q9H607 264 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 RUBCNLQ9H714 662 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 KRT84Q9NSB2 600 aa10.63□□□□□ -0.71
CMSS1-208ENST00000496116 SCN3BQ9NY72 215 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms