RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 PCDH9Q9HC56 1237 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 TXNRD2Q9NNW7 524 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 TREM1Q9NP99 234 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 KCNK9Q9NPC2 374 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 ASAH2Q9NR71 780 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 C20orf141Q9NUB4 165 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 SETD4Q9NVD3 440 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 OCIAD1Q9NX40 245 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 PKD2L2Q9NZM6 624 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 OR6C3Q9NZP0 311 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 VPS54Q9P1Q0 977 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 ABI3Q9P2A4 366 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 COPG2Q9UBF2 871 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 PEMTQ9UBM1 199 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 PEF1Q9UBV8 284 aaKnown RBP2.12□□□□□ -2.07
PTPN12-212ENST00000494248 UBQLN2Q9UHD9 624 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 DBNLQ9UJU6 430 aaKnown RBP2.12□□□□□ -2.07
PTPN12-212ENST00000494248 FBXW11Q9UKB1 542 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 KCNK6Q9Y257 313 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 CMAHPQ9Y471 501 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 SH3TC1Q8TE82 1336 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 CARMIL1Q5VZK9 1371 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 CYP3A7-CYP3A51PA0A087WV96 503 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 TBC1D3DA0A087WVF3 549 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 TBC1D3IA0A087WXS9 549 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 TBC1D3EA0A087X179 549 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 TBC1D3KA0A087X1G2 549 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 A0A0J9YYE9 177 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 A0A0U1RQJ8 604 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 IQANK1A0A1B0GTG1 560 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 A0A1B0GU03 582 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 A0A1W2PR77 199 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 TBC1D3BA6NDS4 549 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 TBC1D3FA6NER0 549 aaPredicted RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 HELTA6NFD8 242 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 AGAP5A6NIR3 686 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 OR52A4PA6NMU1 304 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 IQCF5A8MTL0 148 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 MAGEB17A8MXT2 336 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 TBC1D3LB9A6J9 549 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 KBTBD13C9JR72 458 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 MCIDASD6RGH6 385 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 TLR4O00206 839 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 PSMD11O00231 422 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 HIP1O00291 1037 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 ANKRD28O15084 1053 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 NKX2-8O15522 239 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 CHMP2AO43633 222 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 ITM2AO43736 263 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 SELENOFO60613 162 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 LMX1BO60663 402 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 DNAJB6O75190 326 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 CLN5O75503 358 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 CSDE1O75534 798 aaKnown RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 TGM6O95932 706 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 CLPTM1O96005 669 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 TRBC1P01850 177 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 HLA-DQA2P01906 255 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 APOA1P02647 267 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 IGFBP1P08833 259 aaPredicted RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 RPSAP08865 295 aaKnown RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 OR52Z1P0C646 297 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 LINGO3P0C6S8 592 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 TBC1D3HP0C7X1 549 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 MYZAPP0CAP1 466 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 OR8G3PP0DMU2 310 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 IRF1P10914 325 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 ENO3P13929 434 aaPredicted RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 MMP9P14780 707 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 PFKFB1P16118 471 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 NCF2P19878 526 aaPredicted RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 DRD5P21918 477 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 CYP3A7P24462 503 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 EEF1B2P24534 225 aaKnown RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 ITGA3P26006 1051 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 NMT1P30419 496 aaKnown RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 AXLP30530 894 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 RRM2P31350 389 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 SERPINB6P35237 376 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 SPAM1P38567 509 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 ALDH3B1P43353 468 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 SLC6A12P48065 614 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 LEPRP48357 1165 aaKnown RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 AMTP48728 403 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 SUOXP51687 545 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 HNRNPFP52597 415 aaKnown RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 CRYBB1P53674 252 aaPredicted RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 GALCP54803 685 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 ADPRHP54922 357 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 CLDN8P56748 225 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 GSCP56915 257 aaPredicted RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 KRTAP12-2P59991 146 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 DSTNP60981 165 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 GALK2Q01415 458 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 TLE3Q04726 772 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 PPIDQ08752 370 aaKnown RBP2.11□□□□□ -2.07
PTPN12-212ENST00000494248 PDE7AQ13946 482 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 USH1GQ495M9 461 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 IQCCQ4KMZ1 466 aa2.11□□□□□ -2.07
PTPN12-212ENST00000494248 C14orf177Q52M58 125 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms