RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 OR8D1Q8WZ84 308 aa11.2□□□□□ -0.62
BRCA1-222ENST00000493919 LENG8Q96PV6 779 aaPredicted RBP11.2□□□□□ -0.62
BRCA1-222ENST00000493919 SARGQ9BW04 601 aa11.2□□□□□ -0.62
BRCA1-222ENST00000493919 GTPBP2Q9BX10 602 aaKnown RBP11.2□□□□□ -0.62
BRCA1-222ENST00000493919 ABCD2Q9UBJ2 740 aa11.2□□□□□ -0.62
BRCA1-222ENST00000493919 DCDC2Q9UHG0 476 aa11.2□□□□□ -0.62
BRCA1-222ENST00000493919 TNPO3Q9Y5L0 923 aaKnown RBP11.2□□□□□ -0.62
BRCA1-222ENST00000493919 PSAT1Q9Y617 370 aa11.2□□□□□ -0.62
BRCA1-222ENST00000493919 LAMA1P25391 3075 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 PRAMEF11O60813 436 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 DEAF1O75398 565 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-222ENST00000493919 RPP40O75818 363 aaKnown RBP11.19□□□□□ -0.62
BRCA1-222ENST00000493919 CD160O95971 181 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 GOT2P00505 430 aaKnown RBP11.19□□□□□ -0.62
BRCA1-222ENST00000493919 PLATP00750 562 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 S100A8P05109 93 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 YES1P07947 543 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 PTAFRP25105 342 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 GPC1P35052 558 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 HPCAL1P37235 193 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 FDFT1P37268 417 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 RACK1P63244 317 aaKnown RBP11.19□□□□□ -0.62
BRCA1-222ENST00000493919 SMCO1Q147U7 214 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 PAFAH1B3Q15102 231 aaKnown RBP11.19□□□□□ -0.62
BRCA1-222ENST00000493919 CHRNA6Q15825 494 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 UAP1Q16222 522 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-222ENST00000493919 TFDP3Q5H9I0 405 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 MANEAQ5SRI9 462 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 LIPNQ5VXI9 398 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 TMEM81Q6P7N7 255 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 CCDC137Q6PK04 289 aaKnown RBP11.19□□□□□ -0.62
BRCA1-222ENST00000493919 PHC2Q8IXK0 858 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 LRRN4Q8WUT4 740 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 C12orf43Q96C57 262 aaKnown RBP11.19□□□□□ -0.62
BRCA1-222ENST00000493919 ELP4Q96EB1 424 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 FEM1CQ96JP0 617 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 ZDHHC6Q9H6R6 413 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 FBRSQ9HAH7 460 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 PDE7BQ9NP56 450 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 GMPR2Q9P2T1 348 aaKnown RBP11.19□□□□□ -0.62
BRCA1-222ENST00000493919 ENPP5Q9UJA9 477 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 hCG_1818297A0A087WSY0 165 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 A0A0U1RQV5 110 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 GPR89AB7ZAQ6 455 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 GCATO75600 419 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 GPR89BP0CG08 455 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 G0S2P27469 103 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 UQCRC1P31930 480 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 ACTR3P61158 418 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 RPS14P62263 151 aaKnown RBP11.19□□□□□ -0.62
BRCA1-222ENST00000493919 BTKQ06187 659 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 PUDPQ08623 228 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 THOC5Q13769 683 aaKnown RBP11.19□□□□□ -0.62
BRCA1-222ENST00000493919 PUM1Q14671 1186 aaKnown RBP eCLIP11.19□□□□□ -0.62
BRCA1-222ENST00000493919 CST6Q15828 149 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 ETFDHQ16134 617 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 LPAL2Q16609 132 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 TYSND1Q2T9J0 566 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 GFOD2Q3B7J2 385 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 ATXN7L2Q5T6C5 722 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-222ENST00000493919 AADACL2Q6P093 401 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 NPNTQ6UXI9 565 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 SSX9Q7RTT3 188 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 EFL1Q7Z2Z2 1120 aaKnown RBP11.19□□□□□ -0.62
BRCA1-222ENST00000493919 TMEM126BQ8IUX1 230 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 CTAGE3PQ8IX95 158 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 FRMD1Q8N878 549 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 CHST14Q8NCH0 376 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 OR2A12Q8NGT7 310 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 HM13Q8TCT9 377 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 CKAP2Q8WWK9 683 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 ALG3Q92685 438 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 PROX1Q92786 737 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 RHBDF1Q96CC6 855 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 VRK1Q99986 396 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-222ENST00000493919 TMEM109Q9BVC6 243 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 OPN3Q9H1Y3 402 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-222ENST00000493919 SLC26A1Q9H2B4 701 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 PDFQ9HBH1 243 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 BTNL2Q9UIR0 455 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 PCDHGB4Q9UN71 923 aa11.19□□□□□ -0.62
BRCA1-222ENST00000493919 PCDHGA9Q9Y5G4 932 aaKnown RBP11.19□□□□□ -0.62
BRCA1-222ENST00000493919 FANCMQ8IYD8 2048 aa11.18□□□□□ -0.62
BRCA1-222ENST00000493919 FAM47DPA6NHR8 397 aa11.18□□□□□ -0.62
BRCA1-222ENST00000493919 MARCH11A6NNE9 402 aa11.18□□□□□ -0.62
BRCA1-222ENST00000493919 KPNA3O00505 521 aaPredicted RBP11.18□□□□□ -0.62
BRCA1-222ENST00000493919 MID1O15344 667 aa11.18□□□□□ -0.62
BRCA1-222ENST00000493919 ARHGEF9O43307 516 aa11.18□□□□□ -0.62
BRCA1-222ENST00000493919 SGCEO43556 437 aa11.18□□□□□ -0.62
BRCA1-222ENST00000493919 GPX5O75715 221 aa11.18□□□□□ -0.62
BRCA1-222ENST00000493919 SCO1O75880 301 aa11.18□□□□□ -0.62
BRCA1-222ENST00000493919 IGSF6O95976 241 aa11.18□□□□□ -0.62
BRCA1-222ENST00000493919 IGHV2-70P01814 119 aa11.18□□□□□ -0.62
BRCA1-222ENST00000493919 NUDT17P0C025 328 aa11.18□□□□□ -0.62
BRCA1-222ENST00000493919 CYP2A7P20853 494 aa11.18□□□□□ -0.62
BRCA1-222ENST00000493919 CASP6P55212 293 aa11.18□□□□□ -0.62
BRCA1-222ENST00000493919 SNRPD1P62314 119 aaKnown RBP11.18□□□□□ -0.62
BRCA1-222ENST00000493919 IL10RBQ08334 325 aa11.18□□□□□ -0.62
BRCA1-222ENST00000493919 MGAT5Q09328 741 aa11.18□□□□□ -0.62
BRCA1-222ENST00000493919 BNIP2Q12982 314 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms