RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 MYO1DO94832 1006 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 TGFB1P01137 390 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 ACPPP15309 386 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 IDSP22304 550 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 GPR1P46091 355 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 SIM2Q14190 667 aaPredicted RBP12.38□□□□□ -0.43
PRAME-213ENST00000492657 XAF1Q6GPH4 301 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 ZNF852Q6ZMS4 543 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 PPP1R14BQ96C90 147 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 OR51B5Q9H339 312 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 PLAGL1Q9UM63 463 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 KCNE2Q9Y6J6 123 aa12.38□□□□□ -0.43
PRAME-213ENST00000492657 NINQ8N4C6 2090 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 LINC01553A4QN01 128 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.37□□□□□ -0.43
PRAME-213ENST00000492657 SLC9A3R1O14745 358 aaPredicted RBP12.37□□□□□ -0.43
PRAME-213ENST00000492657 FKBP9O95302 570 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 CPNE6O95741 557 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 BCL10O95999 233 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 C6P13671 934 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 MAGEA2P43356 314 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 CRYBA2P53672 197 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 SLBPQ14493 270 aaKnown RBP eCLIP12.37□□□□□ -0.43
PRAME-213ENST00000492657 NFE2L1Q14494 772 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 TRIM16LQ309B1 348 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 CCDC92Q53HC0 331 aaPredicted RBP12.37□□□□□ -0.43
PRAME-213ENST00000492657 MSANTD1Q6ZTZ1 278 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 FKBP9P1Q75LS8 142 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 ARMCX6Q7L4S7 300 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 TRMT11Q7Z4G4 463 aaKnown RBP12.37□□□□□ -0.43
PRAME-213ENST00000492657 NANOGNBQ7Z5D8 188 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 CACUL1Q86Y37 369 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 TMCO5AQ8N6Q1 288 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 CELF5Q8N6W0 485 aaKnown RBP12.37□□□□□ -0.43
PRAME-213ENST00000492657 PSD4Q8NDX1 1056 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 WDR48Q8TAF3 677 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 CNIH3Q8TBE1 160 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 SP7Q8TDD2 431 aaPredicted RBP12.37□□□□□ -0.43
PRAME-213ENST00000492657 NRBF2Q96F24 287 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 TPD52L3Q96J77 140 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 LRIG1Q96JA1 1093 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 HSH2DQ96JZ2 352 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 TUBA1CQ9BQE3 449 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 FAM120CQ9NX05 1096 aaKnown RBP12.37□□□□□ -0.43
PRAME-213ENST00000492657 POU2F3Q9UKI9 436 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 FZD4Q9ULV1 537 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 PCDHB11Q9Y5F2 797 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 MGAT4DA6NG13 374 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 QSOX1O00391 747 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 PCDH7O60245 1069 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 LZTS3O60299 673 aaPredicted RBP12.37□□□□□ -0.43
PRAME-213ENST00000492657 PRMT3O60678 531 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 EPHA2P29317 976 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 OPRL1P41146 370 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 DAPP51397 102 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 ISL1P61371 349 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 RGS21Q2M5E4 152 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.37□□□□□ -0.43
PRAME-213ENST00000492657 OR2T5Q6IEZ7 315 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 FAM83HQ6ZRV2 1179 aaPredicted RBP12.37□□□□□ -0.43
PRAME-213ENST00000492657 GPR155Q7Z3F1 870 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 ADGRD2Q7Z7M1 963 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 NRSN1Q8IZ57 195 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 NAGSQ8N159 534 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 OR2T29Q8NH02 315 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 NUS1Q96E22 293 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 MAGEB10Q96LZ2 347 aaPredicted RBP12.37□□□□□ -0.43
PRAME-213ENST00000492657 IL1RAPQ9NPH3 570 aa12.37□□□□□ -0.43
PRAME-213ENST00000492657 PAK1IP1Q9NWT1 392 aaPredicted RBP12.37□□□□□ -0.43
PRAME-213ENST00000492657 SAMD4AQ9UPU9 718 aaKnown RBP12.37□□□□□ -0.43
PRAME-213ENST00000492657 FAM32AQ9Y421 112 aaKnown RBP12.37□□□□□ -0.43
PRAME-213ENST00000492657 XPNPEP2O43895 674 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 ABCB7O75027 752 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 POP7O75817 140 aaKnown RBP12.36□□□□□ -0.43
PRAME-213ENST00000492657 SEC14L2O76054 403 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 HNRNPA1P09651 372 aaKnown RBP eCLIP12.36□□□□□ -0.43
PRAME-213ENST00000492657 ZNF8P17098 575 aaPredicted RBP12.36□□□□□ -0.43
PRAME-213ENST00000492657 IL1RNP18510 177 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 FSHRP23945 695 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 GRSF1Q12849 480 aaKnown RBP eCLIP12.36□□□□□ -0.43
PRAME-213ENST00000492657 RAPSNQ13702 412 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 DPY19L1Q2PZI1 675 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 GAB4Q2WGN9 574 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 FAM180BQ6P0A1 224 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 MED27Q6P2C8 311 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 HIPK1Q86Z02 1210 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 ETFBKMTQ8IXQ9 262 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 SPARTQ8N0X7 666 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 PLA2G15Q8NCC3 412 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 SMG7Q92540 1137 aaKnown RBP12.36□□□□□ -0.43
PRAME-213ENST00000492657 RDH12Q96NR8 316 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 FAM129BQ96TA1 746 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 TMEM121BQ9BXQ6 578 aaPredicted RBP12.36□□□□□ -0.43
PRAME-213ENST00000492657 CCDC90BQ9GZT6 254 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 RIBC2Q9H4K1 309 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 TMEM9Q9P0T7 183 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 SPATA7Q9P0W8 599 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 TRPM6Q9BX84 2022 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 SZT2Q5T011 3432 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 HEPACAM2A8MVW5 462 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms