RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 PTGS2P35354 604 aa12.39□□□□□ -0.43
USF1-206ENST00000491629 CYLC1P35663 651 aaPredicted RBP12.39□□□□□ -0.43
USF1-206ENST00000491629 SKIV2L2P42285 1042 aaKnown RBP12.39□□□□□ -0.43
USF1-206ENST00000491629 MEOX1P50221 254 aa12.39□□□□□ -0.43
USF1-206ENST00000491629 ITGA8P53708 1063 aa12.39□□□□□ -0.43
USF1-206ENST00000491629 ADARP55265 1226 aaKnown RBP12.39□□□□□ -0.43
USF1-206ENST00000491629 MLF1P58340 268 aa12.39□□□□□ -0.43
USF1-206ENST00000491629 CUL1Q13616 776 aa12.39□□□□□ -0.43
USF1-206ENST00000491629 PEX26Q7Z412 305 aa12.39□□□□□ -0.43
USF1-206ENST00000491629 SLC26A11Q86WA9 606 aa12.39□□□□□ -0.43
USF1-206ENST00000491629 TGIF2LYQ8IUE0 185 aa12.39□□□□□ -0.43
USF1-206ENST00000491629 SULF2Q8IWU5 870 aa12.39□□□□□ -0.43
USF1-206ENST00000491629 FAM98AQ8NCA5 519 aaKnown RBP12.39□□□□□ -0.43
USF1-206ENST00000491629 ASB11Q8WXH4 323 aa12.39□□□□□ -0.43
USF1-206ENST00000491629 CALR3Q96L12 384 aaKnown RBP12.39□□□□□ -0.43
USF1-206ENST00000491629 LPAR4Q99677 370 aa12.39□□□□□ -0.43
USF1-206ENST00000491629 KIFC1Q9BW19 673 aa12.39□□□□□ -0.43
USF1-206ENST00000491629 TMEM184CQ9NVA4 438 aa12.39□□□□□ -0.43
USF1-206ENST00000491629 SYBUQ9NX95 663 aa12.39□□□□□ -0.43
USF1-206ENST00000491629 NAALAD2Q9Y3Q0 740 aa12.39□□□□□ -0.43
USF1-206ENST00000491629 JMJD1CQ15652 2540 aa12.38□□□□□ -0.43
USF1-206ENST00000491629 FAM221AA4D161 298 aa12.38□□□□□ -0.43
USF1-206ENST00000491629 MAGEB17A8MXT2 336 aa12.38□□□□□ -0.43
USF1-206ENST00000491629 ESR1P03372 595 aa12.38□□□□□ -0.43
USF1-206ENST00000491629 PTMAP06454 111 aaKnown RBP12.38□□□□□ -0.43
USF1-206ENST00000491629 TFEBP19484 476 aa12.38□□□□□ -0.43
USF1-206ENST00000491629 MGAT1P26572 445 aa12.38□□□□□ -0.43
USF1-206ENST00000491629 TRHRP34981 398 aaPredicted RBP12.38□□□□□ -0.43
USF1-206ENST00000491629 HSD17B2P37059 387 aa12.38□□□□□ -0.43
USF1-206ENST00000491629 OR4D2P58180 307 aa12.38□□□□□ -0.43
USF1-206ENST00000491629 RPS15AP62244 130 aaKnown RBP12.38□□□□□ -0.43
USF1-206ENST00000491629 ACTN3Q08043 901 aaPredicted RBP12.38□□□□□ -0.43
USF1-206ENST00000491629 ZNF549Q6P9A3 640 aa12.38□□□□□ -0.43
USF1-206ENST00000491629 TMEM200AQ86VY9 491 aa12.38□□□□□ -0.43
USF1-206ENST00000491629 ARMC10Q8N2F6 343 aa12.38□□□□□ -0.43
USF1-206ENST00000491629 HORMAD2Q8N7B1 307 aa12.38□□□□□ -0.43
USF1-206ENST00000491629 PRELID2Q8N945 189 aa12.38□□□□□ -0.43
USF1-206ENST00000491629 NFAM1Q8NET5 270 aaPredicted RBP12.38□□□□□ -0.43
USF1-206ENST00000491629 OR52N2Q8NGI0 321 aa12.38□□□□□ -0.43
USF1-206ENST00000491629 C16orf52Q8NHV5 167 aa12.38□□□□□ -0.43
USF1-206ENST00000491629 HES6Q96HZ4 224 aa12.38□□□□□ -0.43
USF1-206ENST00000491629 SEC16BQ96JE7 1060 aa12.38□□□□□ -0.43
USF1-206ENST00000491629 DLL4Q9NR61 685 aa12.38□□□□□ -0.43
USF1-206ENST00000491629 FAM114A2Q9NRY5 505 aa12.38□□□□□ -0.43
USF1-206ENST00000491629 CCM2LQ9NUG4 571 aaPredicted RBP12.38□□□□□ -0.43
USF1-206ENST00000491629 UTP6Q9NYH9 597 aaKnown RBP12.38□□□□□ -0.43
USF1-206ENST00000491629 PRDM4Q9UKN5 801 aa12.38□□□□□ -0.43
USF1-206ENST00000491629 FN1P02751 2386 aaKnown RBP12.38□□□□□ -0.43
USF1-206ENST00000491629 TCRBV7S3A2A0A539 114 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 KIF5CO60282 957 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 SYF2O95926 243 aaKnown RBP12.37□□□□□ -0.43
USF1-206ENST00000491629 KLK2P20151 261 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 CHRNB4P30926 498 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 CYB561P49447 251 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 HLCSP50747 726 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 DLX5P56178 289 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 NUP107P57740 925 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 TBPL1P62380 186 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 OLR1P78380 273 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 BTG2P78543 158 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 SNX1Q13596 522 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 RPS6KA1Q15418 735 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 SIX1Q15475 284 aaPredicted RBP12.37□□□□□ -0.43
USF1-206ENST00000491629 THEMIS2Q5TEJ8 643 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 MBOAT1Q6ZNC8 495 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 MDGA2Q7Z553 956 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 AFAP1L2Q8N4X5 818 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 OTUD6BQ8N6M0 293 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 UBL4BQ8N7F7 174 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 RNF214Q8ND24 703 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 MCOLN3Q8TDD5 553 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 ASB5Q8WWX0 329 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 OR1F2PQ96R84 312 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 EBNA1BP2Q99848 306 aaKnown RBP12.37□□□□□ -0.43
USF1-206ENST00000491629 FOXC2Q99958 501 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 ZNF559Q9BR84 538 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 IL22Q9GZX6 179 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 ANKHQ9HCJ1 492 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 ZNF358Q9NW07 568 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 KCNN3Q9UGI6 736 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 ZNF148Q9UQR1 794 aa12.37□□□□□ -0.43
USF1-206ENST00000491629 NINQ8N4C6 2090 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 CTAGE15A4D2H0 777 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 PINLYPA6NC86 204 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 ZNF839A8K0R7 811 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 FOXO6A8MYZ6 492 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 MIF4GDA9UHW6 222 aaKnown RBP12.36□□□□□ -0.43
USF1-206ENST00000491629 H3BMM5 538 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 TFECO14948 347 aaPredicted RBP12.36□□□□□ -0.43
USF1-206ENST00000491629 PEX1O43933 1283 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 CDC40O60508 579 aaKnown RBP eCLIP12.36□□□□□ -0.43
USF1-206ENST00000491629 PDE9AO76083 593 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 FHP07954 510 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 NPY2RP49146 381 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 TAS2R50P59544 299 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 MPP1Q00013 466 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 PMPCAQ10713 525 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 MRNIPQ6NTE8 343 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 CTAGE6Q86UF2 777 aa12.36□□□□□ -0.43
USF1-206ENST00000491629 CILP2Q8IUL8 1156 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms