RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 RPRD1AQ96P16 312 aaPredicted RBP4.6□□□□□ -1.67
RTN4-215ENST00000491592 TRNT1Q96Q11 434 aaKnown RBP4.6□□□□□ -1.67
RTN4-215ENST00000491592 PCYT2Q99447 389 aa4.6□□□□□ -1.67
RTN4-215ENST00000491592 GPA33Q99795 319 aa4.6□□□□□ -1.67
RTN4-215ENST00000491592 PAAF1Q9BRP4 392 aa4.6□□□□□ -1.67
RTN4-215ENST00000491592 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.6□□□□□ -1.67
RTN4-215ENST00000491592 RAB34Q9BZG1 259 aa4.6□□□□□ -1.67
RTN4-215ENST00000491592 LRMDAQ9H2I8 198 aa4.6□□□□□ -1.67
RTN4-215ENST00000491592 DCLRE1BQ9H816 532 aa4.6□□□□□ -1.67
RTN4-215ENST00000491592 UCK1Q9HA47 277 aa4.6□□□□□ -1.67
RTN4-215ENST00000491592 USP29Q9HBJ7 922 aa4.6□□□□□ -1.67
RTN4-215ENST00000491592 POLD4Q9HCU8 107 aa4.6□□□□□ -1.67
RTN4-215ENST00000491592 VCX3AQ9NNX9 186 aa4.6□□□□□ -1.67
RTN4-215ENST00000491592 DMAP1Q9NPF5 467 aaPredicted RBP4.6□□□□□ -1.67
RTN4-215ENST00000491592 IL26Q9NPH9 171 aa4.6□□□□□ -1.67
RTN4-215ENST00000491592 ZDHHC18Q9NUE0 388 aa4.6□□□□□ -1.67
RTN4-215ENST00000491592 FKBP14Q9NWM8 211 aa4.6□□□□□ -1.67
RTN4-215ENST00000491592 TMEM161AQ9NX61 479 aa4.6□□□□□ -1.67
RTN4-215ENST00000491592 TFCP2L1Q9NZI6 479 aa4.6□□□□□ -1.67
RTN4-215ENST00000491592 COPG2Q9UBF2 871 aa4.6□□□□□ -1.67
RTN4-215ENST00000491592 PCYOX1Q9UHG3 505 aa4.6□□□□□ -1.67
RTN4-215ENST00000491592 SLC9A8Q9Y2E8 581 aa4.6□□□□□ -1.67
RTN4-215ENST00000491592 UBE2J1Q9Y385 318 aaPredicted RBP4.6□□□□□ -1.67
RTN4-215ENST00000491592 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.6□□□□□ -1.67
RTN4-215ENST00000491592 SPATA31A6Q5VVP1 1343 aa4.6□□□□□ -1.67
RTN4-215ENST00000491592 ANKRD36CQ5JPF3 1778 aa4.6□□□□□ -1.67
RTN4-215ENST00000491592 UBR2Q8IWV8 1755 aa4.6□□□□□ -1.67
RTN4-215ENST00000491592 A0A087X0T9 212 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.59□□□□□ -1.67
RTN4-215ENST00000491592 A0A1W2PN81 502 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 A0A1W2PRG0 241 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 SLC38A8A6NNN8 435 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 YDJCA8MPS7 323 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 MIF4GDA9UHW6 222 aaKnown RBP4.59□□□□□ -1.67
RTN4-215ENST00000491592 SMIM22K7EJ46 135 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 BCL9O00512 1426 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 TRAFD1O14545 582 aaPredicted RBP4.59□□□□□ -1.67
RTN4-215ENST00000491592 CLIC2O15247 247 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 MAGEB2O15479 319 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 CHMP2AO43633 222 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 ECE2O60344 883 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 MITFO75030 526 aaPredicted RBP4.59□□□□□ -1.67
RTN4-215ENST00000491592 USP12O75317 370 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 DCTN3O75935 186 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 RNF8O76064 485 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 PLEKHA8P1O95397 391 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 IGLV2-14P01704 120 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 MBPP02686 304 aaPredicted RBP4.59□□□□□ -1.67
RTN4-215ENST00000491592 SRPRAP08240 638 aaKnown RBP4.59□□□□□ -1.67
RTN4-215ENST00000491592 KRT16P08779 473 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 FAM228BP0C875 321 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 ZCCHC18P0CG32 403 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 F3P13726 295 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 ANPEPP15144 967 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 DDX5P17844 614 aaKnown RBP4.59□□□□□ -1.67
RTN4-215ENST00000491592 NCF2P19878 526 aaPredicted RBP4.59□□□□□ -1.67
RTN4-215ENST00000491592 CYP2B6P20813 491 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 MATN1P21941 496 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 CD27P26842 260 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 GNA11P29992 359 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 NMT1P30419 496 aaKnown RBP4.59□□□□□ -1.67
RTN4-215ENST00000491592 AXLP30530 894 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 CHRNA7P36544 502 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 IGHMBP2P38935 993 aaKnown RBP4.59□□□□□ -1.67
RTN4-215ENST00000491592 ETV5P41161 510 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 CRKLP46109 303 aaKnown RBP4.59□□□□□ -1.67
RTN4-215ENST00000491592 CAMPP49913 170 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 ENTPD1P49961 510 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 SLC18A1P54219 525 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 RAD23BP54727 409 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 PRMT2P55345 433 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 UCP2P55851 309 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 NANOS3P60323 173 aaKnown RBP4.59□□□□□ -1.67
RTN4-215ENST00000491592 MYL6P60660 151 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 GCNT1Q02742 428 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 CFHR3Q02985 330 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 LIPEQ05469 1076 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 KLRC3Q07444 240 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 SEMA3BQ13214 749 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 ZNF177Q13360 481 aaPredicted RBP4.59□□□□□ -1.67
RTN4-215ENST00000491592 KPNB1Q14974 876 aaKnown RBP4.59□□□□□ -1.67
RTN4-215ENST00000491592 NONOQ15233 471 aaKnown RBP eCLIP4.59□□□□□ -1.67
RTN4-215ENST00000491592 MAPK11Q15759 364 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 FAM187BQ17R55 369 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 EDRF1Q3B7T1 1238 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 PCGF3Q3KNV8 242 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 PLCH1Q4KWH8 1693 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 CEP78Q5JTW2 689 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 KIAA1755Q5JYT7 1200 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 DCST1Q5T197 706 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 MROH7Q68CQ1 1323 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 TNS3Q68CZ2 1445 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 PTRHD1Q6GMV3 140 aaKnown RBP4.59□□□□□ -1.67
RTN4-215ENST00000491592 SERPINA13PQ6UXR4 307 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 C10orf71Q711Q0 1435 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 SLC46A3Q7Z3Q1 461 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 RD3Q7Z3Z2 195 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 IRF2BP2Q7Z5L9 587 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 NT5DC3Q86UY8 548 aa4.59□□□□□ -1.67
RTN4-215ENST00000491592 PRIMA1Q86XR5 153 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms