RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 TRIM33Q9UPN9 1127 aa12.65□□□□□ -0.38
SNX12-205ENST00000490561 GOLGA4Q13439 2230 aaKnown RBP12.65□□□□□ -0.38
SNX12-205ENST00000490561 ASCC3Q8N3C0 2202 aaKnown RBP12.65□□□□□ -0.38
SNX12-205ENST00000490561 MYO15AQ9UKN7 3530 aa12.65□□□□□ -0.39
SNX12-205ENST00000490561 SDHDO14521 159 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 NRP2O60462 931 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 MYO1DO94832 1006 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 MT-CO3P00414 261 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 SERPIND1P05546 499 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 FTH1P19P0C7X4 201 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 ACPPP15309 386 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 LBPP18428 481 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 GABRA4P48169 554 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 IDH3AP50213 366 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 RAP1GDS1P52306 607 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 VSX2P58304 361 aaPredicted RBP12.64□□□□□ -0.39
SNX12-205ENST00000490561 CYP4F2P78329 520 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 EIF3IQ13347 325 aaKnown RBP12.64□□□□□ -0.39
SNX12-205ENST00000490561 ADPRMQ3LIE5 342 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 CCDC157Q569K6 752 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 SPDYAQ5MJ70 313 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 DEPDC1Q5TB30 811 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 TLDC1Q6P9B6 456 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 TRIM40Q6P9F5 258 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 ABHD13Q7L211 337 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 MAVSQ7Z434 540 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 SPATA19Q7Z5L4 167 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 PIGWQ7Z7B1 504 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 GPR135Q8IZ08 494 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 FAM9CQ8IZT9 166 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 RFWD2Q8NHY2 731 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 GAL3ST3Q96A11 431 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 RGMAQ96B86 450 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 CMKLR1Q99788 373 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 RTKNQ9BST9 563 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 TMEM120AQ9BXJ8 343 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 SLC6A16Q9GZN6 736 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 REXO4Q9GZR2 422 aaKnown RBP12.64□□□□□ -0.39
SNX12-205ENST00000490561 LRTM1Q9HBL6 345 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 FARSBQ9NSD9 589 aaKnown RBP12.64□□□□□ -0.39
SNX12-205ENST00000490561 SIRT5Q9NXA8 310 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 SERTAD3Q9UJW9 196 aa12.64□□□□□ -0.39
SNX12-205ENST00000490561 GOLGA8QA0A0J9YX86 632 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 FITM1A5D6W6 292 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 GOLGA8OA6NCC3 632 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 LRIT2A6NDA9 550 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 GOLGA8NF8WBI6 632 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 NDUFAB1O14561 156 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 LSM1O15116 133 aaKnown RBP12.63□□□□□ -0.39
SNX12-205ENST00000490561 TGFB1P01137 390 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 PRR35P0CG20 571 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 EPHA3P29320 983 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 GSTM5P46439 218 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 NOVA1P51513 510 aaKnown RBP12.63□□□□□ -0.39
SNX12-205ENST00000490561 ITGA1P56199 1179 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 SIM1P81133 766 aaPredicted RBP12.63□□□□□ -0.39
SNX12-205ENST00000490561 CBX1P83916 185 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 EMX2Q04743 252 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 ACSM2AQ08AH3 577 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 TUBB3Q13509 450 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 GRM7Q14831 915 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 HERC3Q15034 1050 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 SLC9B1Q4ZJI4 515 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 WASHC2DQ5SRD0 308 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 METTL21CQ5VZV1 264 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 ACSM2BQ68CK6 577 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 NXNQ6DKJ4 435 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 FRMPD2BQ6IN97 320 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 OGFOD2Q6N063 350 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 SCIMPQ6UWF3 145 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 Q6ZSR9 355 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 LARP4Q71RC2 724 aaKnown RBP eCLIP12.63□□□□□ -0.39
SNX12-205ENST00000490561 ZFAND4Q86XD8 727 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 ANKS4BQ8N8V4 417 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 OR2L5Q8NG80 312 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 BCAS4Q8TDM0 211 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 C10orf82Q8WW14 230 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 LIN37Q96GY3 246 aaPredicted RBP12.63□□□□□ -0.39
SNX12-205ENST00000490561 PRR11Q96HE9 360 aaPredicted RBP12.63□□□□□ -0.39
SNX12-205ENST00000490561 RILPQ96NA2 401 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 KCNC2Q96PR1 638 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 TBCDQ9BTW9 1192 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 AKTIPQ9H8T0 292 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 KCNK13Q9HB14 408 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 IRAK4Q9NWZ3 460 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 ASIC5Q9NY37 505 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 ADAM29Q9UKF5 820 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 EIF3LQ9Y262 564 aaKnown RBP12.63□□□□□ -0.39
SNX12-205ENST00000490561 RUVBL1Q9Y265 456 aaKnown RBP12.63□□□□□ -0.39
SNX12-205ENST00000490561 ARL2BPQ9Y2Y0 163 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 CCL27Q9Y4X3 112 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 SLC22A7Q9Y694 548 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 VPS13AQ96RL7 3174 aa12.63□□□□□ -0.39
SNX12-205ENST00000490561 LOC105369274A0A096LPK9 316 aa12.62□□□□□ -0.39
SNX12-205ENST00000490561 LOC102723532A0A0G2JNH3 316 aa12.62□□□□□ -0.39
SNX12-205ENST00000490561 B4E171 279 aa12.62□□□□□ -0.39
SNX12-205ENST00000490561 TMEM150CB9EJG8 249 aa12.62□□□□□ -0.39
SNX12-205ENST00000490561 PRAMEF10O60809 474 aa12.62□□□□□ -0.39
SNX12-205ENST00000490561 SEC22BO75396 215 aa12.62□□□□□ -0.39
SNX12-205ENST00000490561 OR2B3O76000 313 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms