RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 SYCP3Q8IZU3 236 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 TMCO5AQ8N6Q1 288 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 ZNF614Q8N883 585 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 AMER3Q8N944 861 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 OR4D10Q8NGI6 311 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 FIBINQ8TAL6 211 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 NEDD4LQ96PU5 975 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 USP28Q96RU2 1077 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 HNRNPABQ99729 332 aaKnown RBP3.38□□□□□ -1.87
CD46-216ENST00000490278 OPRPNQ99935 248 aaPredicted RBP3.38□□□□□ -1.87
CD46-216ENST00000490278 GPATCH1Q9BRR8 931 aaKnown RBP3.38□□□□□ -1.87
CD46-216ENST00000490278 HOXD1Q9GZZ0 328 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 C2orf40Q9H1Z8 148 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 SRD5A3Q9H8P0 318 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 ZDHHC18Q9NUE0 388 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 ABCB8Q9NUT2 735 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 TMEM161AQ9NX61 479 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 POLKQ9UBT6 870 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 ERRFI1Q9UJM3 462 aaPredicted RBP3.38□□□□□ -1.87
CD46-216ENST00000490278 FBXL5Q9UKA1 691 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 GPR132Q9UNW8 380 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 CSNK1G3Q9Y6M4 447 aa3.38□□□□□ -1.87
CD46-216ENST00000490278 IGLV7-46A0A075B6I9 117 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 A0A087WZ39 114 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 ANTXRLA6NF34 631 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 PGRMC2O15173 223 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 ARHGEF9O43307 516 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 KIF5CO60282 957 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 RAD51DO75771 328 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 SLC16A8O95907 504 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 GH1P01241 217 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 IGHEP01854 428 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 KRT3P12035 628 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 ST8SIA6P61647 398 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 CYCSP99999 105 aaKnown RBP3.37□□□□□ -1.87
CD46-216ENST00000490278 DRP2Q13474 957 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 MTF1Q14872 753 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 PPA1Q15181 289 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 ATP1A1-AS1Q5TC04 95 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 ZC2HC1BQ5TFG8 222 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 PODNL1Q6PEZ8 512 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 NHLRC1Q6VVB1 395 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 MACC1Q6ZN28 852 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 CHMP1BQ7LBR1 199 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 COX8CQ7Z4L0 72 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 SIAH3Q8IW03 269 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 KIAA0895Q8NCT3 520 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 CHURC1Q8WUH1 139 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 SLCO2A1Q92959 643 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 SNRNP40Q96DI7 357 aaKnown RBP3.37□□□□□ -1.87
CD46-216ENST00000490278 OMA1Q96E52 524 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 ZNF300Q96RE9 604 aaPredicted RBP3.37□□□□□ -1.87
CD46-216ENST00000490278 C17orf62Q9BQA9 187 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 FUT8Q9BYC5 575 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 DNAI2Q9GZS0 605 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 ZNF350Q9GZX5 532 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 ALDH8A1Q9H2A2 487 aaPredicted RBP3.37□□□□□ -1.87
CD46-216ENST00000490278 C5orf66Q9H5L9 145 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 SPHK2Q9NRA0 654 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 DNAJC17Q9NVM6 304 aaKnown RBP3.37□□□□□ -1.87
CD46-216ENST00000490278 NCKAP1Q9Y2A7 1128 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 PCDHGA1Q9Y5H4 931 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 KIF26BQ2KJY2 2108 aa3.37□□□□□ -1.87
CD46-216ENST00000490278 SCO2O43819 266 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 ACSL4O60488 711 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 CEACAM4O75871 244 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 MT-ND2P03891 347 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 C8orf89P0DMQ9 161 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 GOT1P17174 413 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 PRKACGP22612 351 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 SNU13P55769 128 aaKnown RBP3.36□□□□□ -1.87
CD46-216ENST00000490278 HUNKP57058 714 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 ERVK11-1P61568 191 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 RPP38P78345 283 aaKnown RBP3.36□□□□□ -1.87
CD46-216ENST00000490278 ASIC1P78348 528 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 IRX4P78413 519 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 IRX1P78414 480 aaPredicted RBP3.36□□□□□ -1.87
CD46-216ENST00000490278 AKAP17AQ02040 695 aaKnown RBP3.36□□□□□ -1.87
CD46-216ENST00000490278 ABRQ12979 859 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 KBTBD12Q3ZCT8 623 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 FAM106AQ4KMX7 169 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 ZNF789Q5FWF6 425 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 ARMCX4Q5H9R4 360 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 C5orf24Q7Z6I8 188 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 ZER1Q7Z7L7 766 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 IQCA1Q86XH1 822 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 CATSPERDQ86XM0 798 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 CLYBLQ8N0X4 340 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 SPATA3Q8NHX4 192 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 ZNF519Q8TB69 540 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 CASP10Q92851 521 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 POM121L2Q96KW2 1035 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 FAM218AQ96MZ4 157 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 IL12RB2Q99665 862 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 PRMT1Q99873 361 aaKnown RBP3.36□□□□□ -1.87
CD46-216ENST00000490278 IDI2Q9BXS1 227 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 MMADHCQ9H3L0 296 aaPredicted RBP3.36□□□□□ -1.87
CD46-216ENST00000490278 DPEP2Q9H4A9 486 aa3.36□□□□□ -1.87
CD46-216ENST00000490278 MTHFD2LQ9H903 347 aaPredicted RBP3.36□□□□□ -1.87
CD46-216ENST00000490278 MED20Q9H944 212 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms