RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 COILP38432 576 aaPredicted RBP8.81□□□□□ -1
SNX17-207ENST00000489402 RHAGQ02094 409 aa8.81□□□□□ -1
SNX17-207ENST00000489402 SP140Q13342 867 aa8.81□□□□□ -1
SNX17-207ENST00000489402 USP10Q14694 798 aaKnown RBP8.81□□□□□ -1
SNX17-207ENST00000489402 HERC3Q15034 1050 aa8.81□□□□□ -1
SNX17-207ENST00000489402 ANKRD22Q5VYY1 191 aa8.81□□□□□ -1
SNX17-207ENST00000489402 SPINK14Q6IE38 97 aa8.81□□□□□ -1
SNX17-207ENST00000489402 CAPN13Q6MZZ7 669 aaPredicted RBP8.81□□□□□ -1
SNX17-207ENST00000489402 NIPAL1Q6NVV3 410 aa8.81□□□□□ -1
SNX17-207ENST00000489402 ZNF549Q6P9A3 640 aa8.81□□□□□ -1
SNX17-207ENST00000489402 AGTRAPQ6RW13 159 aa8.81□□□□□ -1
SNX17-207ENST00000489402 LCTLQ6UWM7 567 aa8.81□□□□□ -1
SNX17-207ENST00000489402 CYHR1Q6ZMK1 362 aa8.81□□□□□ -1
SNX17-207ENST00000489402 Q6ZPB1 254 aaPredicted RBP8.81□□□□□ -1
SNX17-207ENST00000489402 GALNTL5Q7Z4T8 443 aa8.81□□□□□ -1
SNX17-207ENST00000489402 CAND1Q86VP6 1230 aaKnown RBP8.81□□□□□ -1
SNX17-207ENST00000489402 SLC26A11Q86WA9 606 aa8.81□□□□□ -1
SNX17-207ENST00000489402 LGI4Q8N135 537 aa8.81□□□□□ -1
SNX17-207ENST00000489402 MYO1HQ8N1T3 1032 aa8.81□□□□□ -1
SNX17-207ENST00000489402 GHDCQ8N2G8 530 aa8.81□□□□□ -1
SNX17-207ENST00000489402 AGGF1Q8N302 714 aaeCLIP8.81□□□□□ -1
SNX17-207ENST00000489402 TBC1D19Q8N5T2 526 aa8.81□□□□□ -1
SNX17-207ENST00000489402 KCT2Q8NC54 265 aa8.81□□□□□ -1
SNX17-207ENST00000489402 PLPP5Q8NEB5 264 aa8.81□□□□□ -1
SNX17-207ENST00000489402 GABPB2Q8TAK5 448 aaPredicted RBP8.81□□□□□ -1
SNX17-207ENST00000489402 TMEM125Q96AQ2 219 aa8.81□□□□□ -1
SNX17-207ENST00000489402 TM4SF19Q96DZ7 209 aa8.81□□□□□ -1
SNX17-207ENST00000489402 PEX11GQ96HA9 241 aa8.81□□□□□ -1
SNX17-207ENST00000489402 HAUS8Q9BT25 410 aa8.81□□□□□ -1
SNX17-207ENST00000489402 FAM167BQ9BTA0 163 aa8.81□□□□□ -1
SNX17-207ENST00000489402 AARSD1Q9BTE6 412 aaKnown RBP8.81□□□□□ -1
SNX17-207ENST00000489402 RBCK1Q9BYM8 510 aa8.81□□□□□ -1
SNX17-207ENST00000489402 TRIM8Q9BZR9 551 aa8.81□□□□□ -1
SNX17-207ENST00000489402 LRFN1Q9P244 771 aa8.81□□□□□ -1
SNX17-207ENST00000489402 ITGB1BP2Q9UKP3 347 aa8.81□□□□□ -1
SNX17-207ENST00000489402 FBXO5Q9UKT4 447 aa8.81□□□□□ -1
SNX17-207ENST00000489402 NPIPA1Q9UND3 350 aa8.81□□□□□ -1
SNX17-207ENST00000489402 MEMO1Q9Y316 297 aa8.81□□□□□ -1
SNX17-207ENST00000489402 MAD1L1Q9Y6D9 718 aa8.81□□□□□ -1
SNX17-207ENST00000489402 ZCWPW2A0A1B0GU75 182 aa8.8□□□□□ -1
SNX17-207ENST00000489402 ZNF860A6NHJ4 632 aa8.8□□□□□ -1
SNX17-207ENST00000489402 GOLGA8MH3BSY2 632 aa8.8□□□□□ -1
SNX17-207ENST00000489402 CDK2AP1O14519 115 aa8.8□□□□□ -1
SNX17-207ENST00000489402 PRRG2O14669 202 aa8.8□□□□□ -1
SNX17-207ENST00000489402 NDC80O14777 642 aa8.8□□□□□ -1
SNX17-207ENST00000489402 NDUFS4O43181 175 aa8.8□□□□□ -1
SNX17-207ENST00000489402 ASNA1O43681 348 aa8.8□□□□□ -1
SNX17-207ENST00000489402 HAUS5O94927 633 aa8.8□□□□□ -1
SNX17-207ENST00000489402 TSPAN12O95859 305 aa8.8□□□□□ -1
SNX17-207ENST00000489402 KRT14P02533 472 aa8.8□□□□□ -1
SNX17-207ENST00000489402 FHP07954 510 aa8.8□□□□□ -1
SNX17-207ENST00000489402 SP1P08047 785 aa8.8□□□□□ -1
SNX17-207ENST00000489402 HIST1H2AGP0C0S8 130 aaPredicted RBP8.8□□□□□ -1
SNX17-207ENST00000489402 CDH1P12830 882 aa8.8□□□□□ -1
SNX17-207ENST00000489402 HIST1H2ADP20671 130 aa8.8□□□□□ -1
SNX17-207ENST00000489402 CCR8P51685 355 aa8.8□□□□□ -1
SNX17-207ENST00000489402 PGGT1BP53609 377 aa8.8□□□□□ -1
SNX17-207ENST00000489402 SLC26A5P58743 744 aa8.8□□□□□ -1
SNX17-207ENST00000489402 MPP1Q00013 466 aa8.8□□□□□ -1
SNX17-207ENST00000489402 RGS1Q08116 209 aa8.8□□□□□ -1
SNX17-207ENST00000489402 NAE1Q13564 534 aa8.8□□□□□ -1
SNX17-207ENST00000489402 MAPKAPK3Q16644 382 aa8.8□□□□□ -1
SNX17-207ENST00000489402 SLC25A25Q6KCM7 469 aa8.8□□□□□ -1
SNX17-207ENST00000489402 NCCRP1Q6ZVX7 275 aaPredicted RBP8.8□□□□□ -1
SNX17-207ENST00000489402 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.8□□□□□ -1
SNX17-207ENST00000489402 RPS19BP1Q86WX3 136 aaKnown RBP8.8□□□□□ -1
SNX17-207ENST00000489402 PDSS2Q86YH6 399 aa8.8□□□□□ -1
SNX17-207ENST00000489402 CEP97Q8IW35 865 aa8.8□□□□□ -1
SNX17-207ENST00000489402 MFSD9Q8NBP5 474 aa8.8□□□□□ -1
SNX17-207ENST00000489402 MCUQ8NE86 351 aa8.8□□□□□ -1
SNX17-207ENST00000489402 TRIM58Q8NG06 486 aa8.8□□□□□ -1
SNX17-207ENST00000489402 ADAMTS18Q8TE60 1221 aa8.8□□□□□ -1
SNX17-207ENST00000489402 PHF10Q8WUB8 498 aaKnown RBP8.8□□□□□ -1
SNX17-207ENST00000489402 CHTF18Q8WVB6 975 aa8.8□□□□□ -1
SNX17-207ENST00000489402 TSLPQ969D9 159 aa8.8□□□□□ -1
SNX17-207ENST00000489402 TBC1D20Q96BZ9 403 aa8.8□□□□□ -1
SNX17-207ENST00000489402 HIST1H2AHQ96KK5 128 aa8.8□□□□□ -1
SNX17-207ENST00000489402 SERPINB12Q96P63 405 aa8.8□□□□□ -1
SNX17-207ENST00000489402 NPAS2Q99743 824 aa8.8□□□□□ -1
SNX17-207ENST00000489402 HIST1H2AJQ99878 128 aa8.8□□□□□ -1
SNX17-207ENST00000489402 H2AFJQ9BTM1 129 aa8.8□□□□□ -1
SNX17-207ENST00000489402 ATG10Q9H0Y0 220 aa8.8□□□□□ -1
SNX17-207ENST00000489402 CDCP1Q9H5V8 836 aa8.8□□□□□ -1
SNX17-207ENST00000489402 PARVBQ9HBI1 364 aa8.8□□□□□ -1
SNX17-207ENST00000489402 LZTFL1Q9NQ48 299 aa8.8□□□□□ -1
SNX17-207ENST00000489402 TAS2R13Q9NYV9 303 aa8.8□□□□□ -1
SNX17-207ENST00000489402 PDE10AQ9Y233 779 aa8.8□□□□□ -1
SNX17-207ENST00000489402 E9PLN8 166 aa8.79□□□□□ -1
SNX17-207ENST00000489402 FCHO1O14526 889 aa8.79□□□□□ -1
SNX17-207ENST00000489402 SLC16A5O15375 505 aa8.79□□□□□ -1
SNX17-207ENST00000489402 OR1F1O43749 312 aa8.79□□□□□ -1
SNX17-207ENST00000489402 LCMT2O60294 686 aaKnown RBP8.79□□□□□ -1
SNX17-207ENST00000489402 NME2P1O60361 137 aa8.79□□□□□ -1
SNX17-207ENST00000489402 SLC25A12O75746 678 aa8.79□□□□□ -1
SNX17-207ENST00000489402 NEURL1O76050 574 aa8.79□□□□□ -1
SNX17-207ENST00000489402 B3GALT4O96024 378 aa8.79□□□□□ -1
SNX17-207ENST00000489402 SERPIND1P05546 499 aa8.79□□□□□ -1
SNX17-207ENST00000489402 CCDC175P0C221 793 aa8.79□□□□□ -1
SNX17-207ENST00000489402 ALOX12P18054 663 aa8.79□□□□□ -1
SNX17-207ENST00000489402 CAPN3P20807 821 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms