RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 NSG2Q9Y328 171 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 ZHX2Q9Y6X8 837 aa3.33□□□□□ -1.88
SSR1-209ENST00000488834 PPIP5K2O43314 1243 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 PI15O43692 258 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 PRAF2O60831 178 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 C9P02748 559 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 VIMP08670 466 aaKnown RBP3.32□□□□□ -1.88
SSR1-209ENST00000488834 TCF4P15884 667 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 SHC1P29353 583 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 PRKCIP41743 596 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 KRTAP10-12P60413 245 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 LMO4P61968 165 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 TFCP2Q12800 502 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 SRSF9Q13242 221 aaKnown RBP eCLIP3.32□□□□□ -1.88
SSR1-209ENST00000488834 TRA2AQ13595 282 aaKnown RBP eCLIP3.32□□□□□ -1.888e-9■■■■■ 27
SSR1-209ENST00000488834 MS4A18Q3C1V0 323 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 CCDC92Q53HC0 331 aaPredicted RBP3.32□□□□□ -1.88
SSR1-209ENST00000488834 SPOUT1Q5T280 376 aaKnown RBP3.32□□□□□ -1.88
SSR1-209ENST00000488834 SHEQ5VZ18 495 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 GDPGP1Q6ZNW5 385 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 CDHR3Q6ZTQ4 885 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 CPEB2Q7Z5Q1 589 aaKnown RBP3.32□□□□□ -1.88
SSR1-209ENST00000488834 ZSCAN30Q86W11 494 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 ZFAND4Q86XD8 727 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 Q8NFD4 153 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 OR52B6Q8NGF0 335 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 LRRC15Q8TF66 581 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 CHPT1Q8WUD6 406 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 HEXDCQ8WVB3 486 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 RAD54LQ92698 747 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 RBM41Q96IZ5 413 aaKnown RBP3.32□□□□□ -1.88
SSR1-209ENST00000488834 FAM218AQ96MZ4 157 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 SOSTQ9BQB4 213 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 OVOL2Q9BRP0 275 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 PI4K2AQ9BTU6 479 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 PHPT1Q9NRX4 125 aaPredicted RBP3.32□□□□□ -1.88
SSR1-209ENST00000488834 PDRG1Q9NUG6 133 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 TMOD3Q9NYL9 352 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 FBXL4Q9UKA2 621 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 GMEB2Q9UKD1 530 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 PILRBQ9UKJ0 227 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 NCKAP1Q9Y2A7 1128 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 RNF123Q5XPI4 1314 aa3.32□□□□□ -1.88
SSR1-209ENST00000488834 TRAV18A0A075B6X5 111 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 IGHV3OR16-10A0A075B7F0 116 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 A0A087WZ39 114 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 hCG_38984A0A1B0GV85 526 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 H3BMM5 538 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 SAP30O75446 220 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 POP4O95707 220 aaKnown RBP3.31□□□□□ -1.88
SSR1-209ENST00000488834 GBAP04062 536 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 RPLP0P05388 317 aaKnown RBP3.31□□□□□ -1.88
SSR1-209ENST00000488834 EEF2P13639 858 aaKnown RBP3.31□□□□□ -1.88
SSR1-209ENST00000488834 GATA1P15976 413 aaPredicted RBP3.31□□□□□ -1.88
SSR1-209ENST00000488834 GP5P40197 560 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 DSCR10P59022 87 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 PAX8Q06710 450 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 TNK1Q13470 666 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 FAM106AQ4KMX7 169 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 LBHQ53QV2 105 aaPredicted RBP3.31□□□□□ -1.88
SSR1-209ENST00000488834 SUSD4Q5VX71 490 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 FAM91A1Q658Y4 838 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 FAM166AQ6J272 317 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 ZNF343Q6P1L6 599 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 PRUNE1Q86TP1 453 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 LMNTD2Q8IXW0 634 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 TIGD4Q8IY51 512 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 CHCHD4Q8N4Q1 142 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 PRSS33Q8NF86 280 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 OR10G7Q8NGN6 311 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 C11orf45Q8TAV5 145 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 NPRL2Q8WTW4 380 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 CITED2Q99967 270 aaPredicted RBP3.31□□□□□ -1.88
SSR1-209ENST00000488834 INPP5KQ9BT40 448 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 DCTN5Q9BTE1 182 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 DNAI2Q9GZS0 605 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 DPEP2Q9H4A9 486 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 ZWILCHQ9H900 591 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 GRPEL1Q9HAV7 217 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 CWC25Q9NXE8 425 aaPredicted RBP3.31□□□□□ -1.88
SSR1-209ENST00000488834 ISY1Q9ULR0 285 aaKnown RBP3.31□□□□□ -1.88
SSR1-209ENST00000488834 AGTPBP1Q9UPW5 1226 aa3.31□□□□□ -1.88
SSR1-209ENST00000488834 COL2A1P02458 1487 aaPredicted RBP3.3□□□□□ -1.88
SSR1-209ENST00000488834 MTMR11A4FU01 709 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 HTR3EA5X5Y0 456 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 TCP10L2B9ZVM9 353 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 FAM86B1E9PN63 330 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 NPIPB9F8W1W9 429 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 K7EQD1 137 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 RTCAO00442 366 aaKnown RBP3.3□□□□□ -1.88
SSR1-209ENST00000488834 PSMA7O14818 248 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 FLRT2O43155 660 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 IGHV3-13P01766 116 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 FAM86B2P0C5J1 330 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 CAPN2P17655 700 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 GIFP27352 417 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 GPR183P32249 361 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 CDX1P47902 265 aaPredicted RBP3.3□□□□□ -1.88
SSR1-209ENST00000488834 OR1D5P58170 312 aa3.3□□□□□ -1.88
SSR1-209ENST00000488834 FCHO2Q0JRZ9 810 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 173.4 ms