RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 ASB1Q9Y576 335 aa18.56■□□□□ 0.56
CCM2-216ENST00000488727 PCDHGA7Q9Y5G6 932 aa18.56■□□□□ 0.56
CCM2-216ENST00000488727 HEATR5BQ9P2D3 2071 aa18.56■□□□□ 0.56
CCM2-216ENST00000488727 BBIP1A8MTZ0 92 aa18.55■□□□□ 0.56
CCM2-216ENST00000488727 FBP2O00757 339 aa18.55■□□□□ 0.56
CCM2-216ENST00000488727 PIP5K1BO14986 540 aa18.55■□□□□ 0.56
CCM2-216ENST00000488727 TOX3O15405 576 aaPredicted RBP18.55■□□□□ 0.56
CCM2-216ENST00000488727 PEX1O43933 1283 aa18.55■□□□□ 0.56
CCM2-216ENST00000488727 BCAS2O75934 225 aaPredicted RBP18.55■□□□□ 0.56
CCM2-216ENST00000488727 ALDOCP09972 364 aaKnown RBP18.55■□□□□ 0.56
CCM2-216ENST00000488727 ANKRD34CP0C6C1 535 aa18.55■□□□□ 0.56
CCM2-216ENST00000488727 ST6GAL1P15907 406 aa18.55■□□□□ 0.56
CCM2-216ENST00000488727 GPX3P22352 226 aa18.55■□□□□ 0.56
CCM2-216ENST00000488727 GDF5P43026 501 aa18.55■□□□□ 0.56
CCM2-216ENST00000488727 SLC6A12P48065 614 aa18.55■□□□□ 0.56
CCM2-216ENST00000488727 PSME3P61289 254 aa18.55■□□□□ 0.56
CCM2-216ENST00000488727 FOXC1Q12948 553 aa18.55■□□□□ 0.56
CCM2-216ENST00000488727 FLOT2Q14254 428 aa18.55■□□□□ 0.56
CCM2-216ENST00000488727 SF1Q15637 639 aaKnown RBP18.55■□□□□ 0.56
CCM2-216ENST00000488727 SLC5A12Q1EHB4 618 aa18.55■□□□□ 0.56
CCM2-216ENST00000488727 KIAA1614Q5VZ46 1190 aa18.55■□□□□ 0.56
CCM2-216ENST00000488727 C8orf82Q6P1X6 216 aaPredicted RBP18.55■□□□□ 0.56
CCM2-216ENST00000488727 TMEM126BQ8IUX1 230 aa18.55■□□□□ 0.56
CCM2-216ENST00000488727 CACTIN-AS1Q8N1I8 211 aa18.55■□□□□ 0.56
CCM2-216ENST00000488727 GALNT15Q8N3T1 639 aa18.55■□□□□ 0.56
CCM2-216ENST00000488727 OR2L3Q8NG85 312 aa18.55■□□□□ 0.56
CCM2-216ENST00000488727 OR4K3Q96R72 315 aa18.55■□□□□ 0.56
CCM2-216ENST00000488727 MYCBPQ99417 103 aaPredicted RBP18.55■□□□□ 0.56
CCM2-216ENST00000488727 WWOXQ9NZC7 414 aa18.55■□□□□ 0.56
CCM2-216ENST00000488727 C6orf203Q9P0P8 240 aaPredicted RBP18.55■□□□□ 0.56
CCM2-216ENST00000488727 SUCOQ9UBS9 1254 aaKnown RBP18.55■□□□□ 0.56
CCM2-216ENST00000488727 PCTPQ9UKL6 214 aa18.55■□□□□ 0.56
CCM2-216ENST00000488727 SH2B3Q9UQQ2 575 aa18.55■□□□□ 0.56
CCM2-216ENST00000488727 KLHL20Q9Y2M5 609 aa18.55■□□□□ 0.56
CCM2-216ENST00000488727 PCDHB11Q9Y5F2 797 aa18.55■□□□□ 0.56
CCM2-216ENST00000488727 A0A0J9YY10 115 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 SLC9B1P1A6NJY1 282 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 PPP6CO00743 305 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 CFLARO15519 480 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 PRAMEF10O60809 474 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 MLYCDO95822 493 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 GGT5P36269 586 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 SEPHS1P49903 392 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 AGTR2P50052 363 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 TRA2AQ13595 282 aaKnown RBP eCLIP18.54■□□□□ 0.56
CCM2-216ENST00000488727 THEMIS2Q5TEJ8 643 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 PRAMEF13Q5VWM6 474 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 CAPN13Q6MZZ7 669 aaPredicted RBP18.54■□□□□ 0.56
CCM2-216ENST00000488727 KLHL6Q8WZ60 621 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 TRAPPC9Q96Q05 1148 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 ZNF768Q9H5H4 540 aaKnown RBP18.54■□□□□ 0.56
CCM2-216ENST00000488727 CXorf56Q9H5V9 222 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 WASF3Q9UPY6 502 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 A0A1W2PNU3 283 aaPredicted RBP18.54■□□□□ 0.56
CCM2-216ENST00000488727 ACOT8O14734 319 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 NRP2O60462 931 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 SMNDC1O75940 238 aaKnown RBP eCLIP18.54■□□□□ 0.56
CCM2-216ENST00000488727 S100BP04271 92 aaPredicted RBP18.54■□□□□ 0.56
CCM2-216ENST00000488727 PRR35P0CG20 571 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 LBPP18428 481 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 MAGP20916 626 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 HSPA7P48741 367 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 FOXA1P55317 472 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 PKNOX1P55347 436 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 ZIC1Q15915 447 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 MMEL1Q495T6 779 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 OGFOD2Q6N063 350 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 PDSS2Q86YH6 399 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 TCAIMQ8N3R3 496 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 HIPK4Q8NE63 616 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 KLHL4Q9C0H6 718 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 TUBB1Q9H4B7 451 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 SLC6A20Q9NP91 592 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 CCDC167Q9P0B6 97 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 SLC22A14Q9Y267 594 aa18.54■□□□□ 0.56
CCM2-216ENST00000488727 IGKV1-8A0A0C4DH67 115 aa18.53■□□□□ 0.56
CCM2-216ENST00000488727 MRASO14807 208 aa18.53■□□□□ 0.56
CCM2-216ENST00000488727 ESRRBO95718 433 aa18.53■□□□□ 0.56
CCM2-216ENST00000488727 NPPBP16860 134 aa18.53■□□□□ 0.56
CCM2-216ENST00000488727 PRDX1Q06830 199 aaKnown RBP18.53■□□□□ 0.56
CCM2-216ENST00000488727 LCTLQ6UWM7 567 aa18.53■□□□□ 0.56
CCM2-216ENST00000488727 THOC6Q86W42 341 aaKnown RBP18.53■□□□□ 0.56
CCM2-216ENST00000488727 KLHDC8AQ8IYD2 350 aa18.53■□□□□ 0.56
CCM2-216ENST00000488727 CARFQ8N187 725 aa18.53■□□□□ 0.56
CCM2-216ENST00000488727 UBTD2Q8WUN7 234 aa18.53■□□□□ 0.56
CCM2-216ENST00000488727 ROPN1LQ96C74 230 aa18.53■□□□□ 0.56
CCM2-216ENST00000488727 ASB9Q96DX5 294 aa18.53■□□□□ 0.56
CCM2-216ENST00000488727 LIN37Q96GY3 246 aaPredicted RBP18.53■□□□□ 0.56
CCM2-216ENST00000488727 SLC41A2Q96JW4 573 aa18.53■□□□□ 0.56
CCM2-216ENST00000488727 NR1H4Q96RI1 486 aaPredicted RBP18.53■□□□□ 0.56
CCM2-216ENST00000488727 PACSIN3Q9UKS6 424 aa18.53■□□□□ 0.56
CCM2-216ENST00000488727 ATP6AP2A0A1C7CYW4 349 aa18.52■□□□□ 0.56
CCM2-216ENST00000488727 PMS2P1A4D2B8 440 aa18.52■□□□□ 0.56
CCM2-216ENST00000488727 A6NHS1 94 aa18.52■□□□□ 0.56
CCM2-216ENST00000488727 ATP6AP2O75787 350 aa18.52■□□□□ 0.56
CCM2-216ENST00000488727 WDR47O94967 919 aa18.52■□□□□ 0.56
CCM2-216ENST00000488727 ZBTB11O95625 1053 aaPredicted RBP18.52■□□□□ 0.56
CCM2-216ENST00000488727 NELFEP18615 380 aaKnown RBP18.52■□□□□ 0.56
CCM2-216ENST00000488727 GRIA3P42263 894 aa18.52■□□□□ 0.56
CCM2-216ENST00000488727 MS4A2Q01362 244 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms