RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 AQP12AQ8IXF9 295 aa2.8□□□□□ -1.96
CD46-215ENST00000488596 ZC3H3Q8IXZ2 948 aaKnown RBP2.8□□□□□ -1.96
CD46-215ENST00000488596 CCDC170Q8IYT3 715 aa2.8□□□□□ -1.96
CD46-215ENST00000488596 TDHQ8IZJ6 230 aa2.8□□□□□ -1.96
CD46-215ENST00000488596 PRSS35Q8N3Z0 413 aa2.8□□□□□ -1.96
CD46-215ENST00000488596 FAM89BQ8N5H3 189 aa2.8□□□□□ -1.96
CD46-215ENST00000488596 OR6S1Q8NH40 331 aa2.8□□□□□ -1.96
CD46-215ENST00000488596 HCAR2Q8TDS4 363 aa2.8□□□□□ -1.96
CD46-215ENST00000488596 GRK7Q8WTQ7 553 aa2.8□□□□□ -1.96
CD46-215ENST00000488596 GATAD1Q8WUU5 269 aa2.8□□□□□ -1.96
CD46-215ENST00000488596 UBLCP1Q8WVY7 318 aaPredicted RBP2.8□□□□□ -1.96
CD46-215ENST00000488596 ART5Q96L15 291 aa2.8□□□□□ -1.96
CD46-215ENST00000488596 FAM218AQ96MZ4 157 aa2.8□□□□□ -1.96
CD46-215ENST00000488596 DGCR6LQ9BY27 220 aa2.8□□□□□ -1.96
CD46-215ENST00000488596 C5orf66Q9H5L9 145 aa2.8□□□□□ -1.96
CD46-215ENST00000488596 SRD5A3Q9H8P0 318 aa2.8□□□□□ -1.96
CD46-215ENST00000488596 TUFT1Q9NNX1 390 aa2.8□□□□□ -1.96
CD46-215ENST00000488596 IARS2Q9NSE4 1012 aaKnown RBP2.8□□□□□ -1.96
CD46-215ENST00000488596 CWC25Q9NXE8 425 aaPredicted RBP2.8□□□□□ -1.96
CD46-215ENST00000488596 KLHL8Q9P2G9 620 aaPredicted RBP2.8□□□□□ -1.96
CD46-215ENST00000488596 IL36AQ9UHA7 158 aa2.8□□□□□ -1.96
CD46-215ENST00000488596 SLC12A6Q9UHW9 1150 aa2.8□□□□□ -1.96
CD46-215ENST00000488596 NOCTQ9UK39 431 aaKnown RBP2.8□□□□□ -1.96
CD46-215ENST00000488596 COLEC10Q9Y6Z7 277 aa2.8□□□□□ -1.96
CD46-215ENST00000488596 MYH15Q9Y2K3 1946 aa2.8□□□□□ -1.96
CD46-215ENST00000488596 ACEP12821 1306 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 ILVBLA1L0T0 632 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 C15orf61A6NNL5 157 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 A8MVM7 634 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 SLCO1B7G3V0H7 640 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 H0YIG0 161 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 MLNRO43193 412 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 STX6O43752 255 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 CYTIPO60759 359 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 ZFAND5O76080 213 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 GH1P01241 217 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 MT-ND2P03891 347 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 YES1P07947 543 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 RBMS1P29558 406 aaKnown RBP2.79□□□□□ -1.96
CD46-215ENST00000488596 ATP5DP30049 168 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 SERPINB6P35237 376 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 MAGEB1P43366 347 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 ST8SIA6P61647 398 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 EFTUD2Q15029 972 aaKnown RBP eCLIP2.79□□□□□ -1.964e-11■□□□□ 10.4
CD46-215ENST00000488596 TYSND1Q2T9J0 566 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 HLA-BQ31612 363 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 PM20D1Q6GTS8 502 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 IYDQ6PHW0 289 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 COX8CQ7Z4L0 72 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 GPR141Q7Z602 305 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 AMER3Q8N944 861 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.79□□□□□ -1.96
CD46-215ENST00000488596 OR7G3Q8NG95 312 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 MAPK15Q8TD08 544 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 AFAP1L1Q8TED9 768 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 SAP25Q8TEE9 199 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 TSSK2Q96PF2 358 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 SYT15Q9BQS2 421 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 ZNF559Q9BR84 538 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 ATG101Q9BSB4 218 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 FUT8Q9BYC5 575 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 DNAI2Q9GZS0 605 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 UBQLN3Q9H347 655 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 RPF1Q9H9Y2 349 aaKnown RBP2.79□□□□□ -1.96
CD46-215ENST00000488596 SPHK2Q9NRA0 654 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 PDRG1Q9NUG6 133 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 ARGLU1Q9NWB6 273 aaPredicted RBP2.79□□□□□ -1.96
CD46-215ENST00000488596 SLCO1C1Q9NYB5 712 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 CNIH4Q9P003 139 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 PILRBQ9UKJ0 227 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 ELF5Q9UKW6 265 aaPredicted RBP2.79□□□□□ -1.96
CD46-215ENST00000488596 GPR132Q9UNW8 380 aa2.79□□□□□ -1.96
CD46-215ENST00000488596 PA2G4Q9UQ80 394 aaKnown RBP2.79□□□□□ -1.96
CD46-215ENST00000488596 NEDD4P46934 1319 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 NPHP3Q7Z494 1330 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 IGKV3D-15A0A087WSY6 115 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 A0A0A6YYC8 382 aaPredicted RBP2.78□□□□□ -1.96
CD46-215ENST00000488596 A0A0B4J203 849 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 SMIM30A4D0T7 59 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 ANKDD1BA6NHY2 528 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 SDR42E2A6NKP2 422 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 I3L1I5 382 aaPredicted RBP2.78□□□□□ -1.96
CD46-215ENST00000488596 SLC33A1O00400 549 aaPredicted RBP2.78□□□□□ -1.96
CD46-215ENST00000488596 ZNF263O14978 683 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 PGRMC2O15173 223 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 MAGEB2O15479 319 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 FMO6PO60774 539 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 CRCPO75575 148 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 NXPH2O95156 264 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 SLC16A8O95907 504 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 CALCAP01258 141 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 IGHEP01854 428 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 ZSCAN5DPP0CG00 497 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 MMP12P39900 470 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 FKBP1BP68106 108 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 CETN1Q12798 172 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 RCN2Q14257 317 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 KBTBD12Q3ZCT8 623 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 FGD3Q5JSP0 725 aa2.78□□□□□ -1.96
CD46-215ENST00000488596 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms