RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 AHRP35869 848 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 DLSTP36957 453 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 OR1D4P47884 311 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 ARSFP54793 590 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 MAGOHP61326 146 aaKnown RBP10.51□□□□□ -0.73
UBE4B-210ENST00000488228 RPS18P62269 152 aaKnown RBP10.51□□□□□ -0.73
UBE4B-210ENST00000488228 TLE3Q04726 772 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 CLCQ05315 142 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 RGS1Q08116 209 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 HYAL2Q12891 473 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 LAPTM5Q13571 262 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 DNASE1L3Q13609 305 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 MPP2Q14168 576 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 CPSF6Q16630 551 aaKnown RBP eCLIP10.51□□□□□ -0.73
UBE4B-210ENST00000488228 ST3GAL2Q16842 350 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 MUM1Q2TAK8 710 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 TOR1AIP1Q5JTV8 583 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 MANEAQ5SRI9 462 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 ARHGAP40Q5TG30 622 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 TMEM214Q6NUQ4 689 aaKnown RBP10.51□□□□□ -0.73
UBE4B-210ENST00000488228 LETMD1Q6P1Q0 360 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 MED27Q6P2C8 311 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 FRMD7Q6ZUT3 714 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 COX15Q7KZN9 410 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 TMEM151BQ8IW70 566 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 OR4F6Q8NGB9 312 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 NT5CQ8TCD5 201 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 CREB3L4Q8TEY5 395 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 ATP6V1E2Q96A05 226 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 TLCD1Q96CP7 247 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 TM4SF19Q96DZ7 209 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 CCDC126Q96EE4 140 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 DRC3Q9H069 523 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 GPN2Q9H9Y4 310 aaPredicted RBP10.51□□□□□ -0.73
UBE4B-210ENST00000488228 PRM3Q9NNZ6 103 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 MLXIPLQ9NP71 852 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 SSU72Q9NP77 194 aaKnown RBP10.51□□□□□ -0.73
UBE4B-210ENST00000488228 SLC22A11Q9NSA0 550 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 ZNF446Q9NWS9 450 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 OXSMQ9NWU1 459 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 CTSFQ9UBX1 484 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 IL17BQ9UHF5 180 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 ZNF490Q9ULM2 529 aaPredicted RBP10.51□□□□□ -0.73
UBE4B-210ENST00000488228 MRPS18BQ9Y676 258 aaKnown RBP10.51□□□□□ -0.73
UBE4B-210ENST00000488228 CACNA1GO43497 2377 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 A0A0G2JN53 185 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 TMEM120BA0PK00 339 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 SRRM3A6NNA2 597 aaPredicted RBP10.5□□□□□ -0.73
UBE4B-210ENST00000488228 C9J4A7 227 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 TXNDC9O14530 226 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 TERTO14746 1132 aaKnown RBP10.5□□□□□ -0.73
UBE4B-210ENST00000488228 RRP8O43159 456 aaKnown RBP10.5□□□□□ -0.73
UBE4B-210ENST00000488228 FOXS1O43638 330 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 CNOT3O75175 753 aaKnown RBP10.5□□□□□ -0.73
UBE4B-210ENST00000488228 RDH16O75452 317 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 OR4F21O95013 312 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 CLDN9O95484 217 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 OTCP00480 354 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 KLK3P07288 261 aaPredicted RBP10.5□□□□□ -0.73
UBE4B-210ENST00000488228 CAPN1P07384 714 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 CCNYL3P0C7X3 344 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 ZNF888P0CJ79 500 aaPredicted RBP10.5□□□□□ -0.73
UBE4B-210ENST00000488228 FBLP22087 321 aaKnown RBP10.5□□□□□ -0.73
UBE4B-210ENST00000488228 ALDH3A1P30838 453 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 CASP2P42575 452 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 ETV4P43268 484 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 NAGLUP54802 743 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 RAB8AP61006 207 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 MAT1AQ00266 395 aaKnown RBP10.5□□□□□ -0.73
UBE4B-210ENST00000488228 PCDH1Q08174 1060 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 ABHD18Q0P651 414 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 LCP2Q13094 533 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 PWP1Q13610 501 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 NCF4Q15080 339 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 ZRSR2Q15696 482 aaKnown RBP10.5□□□□□ -0.73
UBE4B-210ENST00000488228 NKAIN1Q4KMZ8 207 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 TTMPQ5BVD1 217 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 TCHHL1Q5QJ38 904 aaPredicted RBP10.5□□□□□ -0.73
UBE4B-210ENST00000488228 YOD1Q5VVQ6 348 aaPredicted RBP10.5□□□□□ -0.73
UBE4B-210ENST00000488228 LIPMQ5VYY2 423 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 ZNF517Q6ZMY9 492 aaPredicted RBP10.5□□□□□ -0.73
UBE4B-210ENST00000488228 ZCCHC23Q6ZST2 131 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 GPRIN3Q6ZVF9 776 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 SYVN1Q86TM6 617 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 PDSS2Q86YH6 399 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 LAS2Q8IYD9 372 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 SHISA5Q8N114 240 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 ENDOVQ8N8Q3 282 aaKnown RBP10.5□□□□□ -0.73
UBE4B-210ENST00000488228 ANKRD42Q8N9B4 389 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 L3MBTL4Q8NA19 623 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 OR7G3Q8NG95 312 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 OR9A4Q8NGU2 314 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 KIAA1143Q96AT1 154 aaPredicted RBP10.5□□□□□ -0.73
UBE4B-210ENST00000488228 CRELD1Q96HD1 420 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 KCNA7Q96RP8 456 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 ZNF382Q96SR6 550 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 SHCBP1LQ9BZQ2 653 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 SLC6A16Q9GZN6 736 aa10.5□□□□□ -0.73
UBE4B-210ENST00000488228 PITHD1Q9GZP4 211 aaPredicted RBP10.5□□□□□ -0.73
UBE4B-210ENST00000488228 KLHL31Q9H511 634 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms