RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 TSNARE1Q96NA8 513 aa18.23■□□□□ 0.51
CD55-209ENST00000488171 TAAR6Q96RI8 345 aa18.23■□□□□ 0.51
CD55-209ENST00000488171 MCMBPQ9BTE3 642 aa18.23■□□□□ 0.51
CD55-209ENST00000488171 RNF32Q9H0A6 362 aa18.23■□□□□ 0.51
CD55-209ENST00000488171 LANCL2Q9NS86 450 aa18.23■□□□□ 0.51
CD55-209ENST00000488171 C19orf25Q9UFG5 118 aaPredicted RBP18.23■□□□□ 0.51
CD55-209ENST00000488171 SNX24Q9Y343 169 aa18.23■□□□□ 0.51
CD55-209ENST00000488171 TRAV17A0A0B4J275 112 aa18.22■□□□□ 0.51
CD55-209ENST00000488171 CTAGE15A4D2H0 777 aa18.22■□□□□ 0.51
CD55-209ENST00000488171 NPEPPSL1A6NEC2 478 aa18.22■□□□□ 0.51
CD55-209ENST00000488171 GALR3O60755 368 aaPredicted RBP18.22■□□□□ 0.51
CD55-209ENST00000488171 DNAJB6O75190 326 aa18.22■□□□□ 0.51
CD55-209ENST00000488171 CLDN1O95832 211 aa18.22■□□□□ 0.51
CD55-209ENST00000488171 UQCRHP07919 91 aa18.22■□□□□ 0.51
CD55-209ENST00000488171 MRPS25P82663 173 aaKnown RBP18.22■□□□□ 0.51
CD55-209ENST00000488171 RHAGQ02094 409 aa18.22■□□□□ 0.51
CD55-209ENST00000488171 CSHL1Q14406 222 aa18.22■□□□□ 0.51
CD55-209ENST00000488171 HERC3Q15034 1050 aa18.22■□□□□ 0.51
CD55-209ENST00000488171 ZNF324BQ6AW86 544 aaPredicted RBP18.22■□□□□ 0.51
CD55-209ENST00000488171 CTAGE6Q86UF2 777 aa18.22■□□□□ 0.51
CD55-209ENST00000488171 NKAPQ8N5F7 415 aaKnown RBP18.22■□□□□ 0.51
CD55-209ENST00000488171 BCORP1Q8N888 145 aa18.22■□□□□ 0.51
CD55-209ENST00000488171 NT5CQ8TCD5 201 aa18.22■□□□□ 0.51
CD55-209ENST00000488171 ANKRD7Q92527 254 aa18.22■□□□□ 0.51
CD55-209ENST00000488171 PEX11GQ96HA9 241 aa18.22■□□□□ 0.51
CD55-209ENST00000488171 RBCK1Q9BYM8 510 aa18.22■□□□□ 0.51
CD55-209ENST00000488171 SMYD2Q9NRG4 433 aa18.22■□□□□ 0.51
CD55-209ENST00000488171 RNF14Q9UBS8 474 aa18.22■□□□□ 0.51
CD55-209ENST00000488171 CNTRLQ7Z7A1 2325 aa18.21■□□□□ 0.51
CD55-209ENST00000488171 CDC123O75794 336 aaPredicted RBP18.21■□□□□ 0.51
CD55-209ENST00000488171 B3GALT4O96024 378 aa18.21■□□□□ 0.51
CD55-209ENST00000488171 SCTRP47872 440 aa18.21■□□□□ 0.51
CD55-209ENST00000488171 AGTR2P50052 363 aa18.21■□□□□ 0.51
CD55-209ENST00000488171 REEP5Q00765 189 aa18.21■□□□□ 0.51
CD55-209ENST00000488171 BTBD16Q32M84 506 aa18.21■□□□□ 0.51
CD55-209ENST00000488171 ABHD17BQ5VST6 288 aa18.21■□□□□ 0.51
CD55-209ENST00000488171 THOC6Q86W42 341 aaKnown RBP18.21■□□□□ 0.51
CD55-209ENST00000488171 CEP97Q8IW35 865 aa18.21■□□□□ 0.51
CD55-209ENST00000488171 ZBED8Q8IZ13 594 aa18.21■□□□□ 0.51
CD55-209ENST00000488171 ANKRD53Q8N9V6 530 aa18.21■□□□□ 0.51
CD55-209ENST00000488171 PLPP5Q8NEB5 264 aa18.21■□□□□ 0.51
CD55-209ENST00000488171 ANKRD49Q8WVL7 239 aa18.21■□□□□ 0.51
CD55-209ENST00000488171 OR1F2PQ96R84 312 aa18.21■□□□□ 0.51
CD55-209ENST00000488171 OLAHQ9NV23 265 aa18.21■□□□□ 0.51
CD55-209ENST00000488171 ZFP69BQ9UJL9 534 aa18.21■□□□□ 0.51
CD55-209ENST00000488171 SPTBN1Q01082 2364 aaKnown RBP18.21■□□□□ 0.51
CD55-209ENST00000488171 PIAS1O75925 651 aa18.2■□□□□ 0.5
CD55-209ENST00000488171 SERPIND1P05546 499 aa18.2■□□□□ 0.5
CD55-209ENST00000488171 ALOX12P18054 663 aa18.2■□□□□ 0.5
CD55-209ENST00000488171 IL10P22301 178 aa18.2■□□□□ 0.5
CD55-209ENST00000488171 AHRP35869 848 aa18.2■□□□□ 0.5
CD55-209ENST00000488171 TDGF1P3P51864 188 aa18.2■□□□□ 0.5
CD55-209ENST00000488171 CDKL1Q00532 357 aa18.2■□□□□ 0.5
CD55-209ENST00000488171 ZNF33BQ06732 778 aa18.2■□□□□ 0.5
CD55-209ENST00000488171 INAQ16352 499 aa18.2■□□□□ 0.5
CD55-209ENST00000488171 DEFB134Q4QY38 66 aa18.2■□□□□ 0.5
CD55-209ENST00000488171 H3F3CQ6NXT2 135 aa18.2■□□□□ 0.5
CD55-209ENST00000488171 TBC1D19Q8N5T2 526 aa18.2■□□□□ 0.5
CD55-209ENST00000488171 VPS39Q96JC1 886 aa18.2■□□□□ 0.5
CD55-209ENST00000488171 MAGEB10Q96LZ2 347 aaPredicted RBP18.2■□□□□ 0.5
CD55-209ENST00000488171 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.2■□□□□ 0.5
CD55-209ENST00000488171 RHOJQ9H4E5 214 aa18.2■□□□□ 0.5
CD55-209ENST00000488171 PELI2Q9HAT8 420 aa18.2■□□□□ 0.5
CD55-209ENST00000488171 STMN3Q9NZ72 180 aa18.2■□□□□ 0.5
CD55-209ENST00000488171 OSGIN2Q9Y236 505 aa18.2■□□□□ 0.5
CD55-209ENST00000488171 SLC22A14Q9Y267 594 aa18.2■□□□□ 0.5
CD55-209ENST00000488171 DYRK1BQ9Y463 629 aa18.2■□□□□ 0.5
CD55-209ENST00000488171 OARD1Q9Y530 152 aa18.2■□□□□ 0.5
CD55-209ENST00000488171 SCN2AQ99250 2005 aa18.2■□□□□ 0.5
CD55-209ENST00000488171 OR5H15A6NDH6 313 aa18.19■□□□□ 0.5
CD55-209ENST00000488171 MAGEB17A8MXT2 336 aa18.19■□□□□ 0.5
CD55-209ENST00000488171 ZNF888P0CJ79 500 aaPredicted RBP18.19■□□□□ 0.5
CD55-209ENST00000488171 OLR1P78380 273 aa18.19■□□□□ 0.5
CD55-209ENST00000488171 RGS1Q08116 209 aa18.19■□□□□ 0.5
CD55-209ENST00000488171 ABRAXAS2Q15018 415 aa18.19■□□□□ 0.5
CD55-209ENST00000488171 NSDHLQ15738 373 aa18.19■□□□□ 0.5
CD55-209ENST00000488171 SFT2D3Q587I9 215 aa18.19■□□□□ 0.5
CD55-209ENST00000488171 NXPE4Q6UWF7 544 aa18.19■□□□□ 0.5
CD55-209ENST00000488171 CAPN12Q6ZSI9 719 aa18.19■□□□□ 0.5
CD55-209ENST00000488171 MAMDC2Q7Z304 686 aaPredicted RBP18.19■□□□□ 0.5
CD55-209ENST00000488171 TMPRSS11BQ86T26 416 aa18.19■□□□□ 0.5
CD55-209ENST00000488171 UTP15Q8TED0 518 aaKnown RBP18.19■□□□□ 0.5
CD55-209ENST00000488171 TSLPQ969D9 159 aa18.19■□□□□ 0.5
CD55-209ENST00000488171 SLC6A16Q9GZN6 736 aa18.19■□□□□ 0.5
CD55-209ENST00000488171 NSMCE4AQ9NXX6 385 aa18.19■□□□□ 0.5
CD55-209ENST00000488171 NBPF19A0A087WUL8 3843 aa18.19■□□□□ 0.5
CD55-209ENST00000488171 A8MUI8 341 aa18.18■□□□□ 0.5
CD55-209ENST00000488171 NDC80O14777 642 aa18.18■□□□□ 0.5
CD55-209ENST00000488171 LRRTM2O43300 516 aa18.18■□□□□ 0.5
CD55-209ENST00000488171 CHST10O43529 356 aa18.18■□□□□ 0.5
CD55-209ENST00000488171 WISP3O95389 354 aaPredicted RBP18.18■□□□□ 0.5
CD55-209ENST00000488171 FHP07954 510 aa18.18■□□□□ 0.5
CD55-209ENST00000488171 HYAL2Q12891 473 aa18.18■□□□□ 0.5
CD55-209ENST00000488171 TSNQ15631 228 aaKnown RBP18.18■□□□□ 0.5
CD55-209ENST00000488171 EXT1Q16394 746 aa18.18■□□□□ 0.5
CD55-209ENST00000488171 C18orf21Q32NC0 220 aaPredicted RBP18.18■□□□□ 0.5
CD55-209ENST00000488171 FCRLBQ6BAA4 426 aa18.18■□□□□ 0.5
CD55-209ENST00000488171 PAPD4Q6PIY7 484 aaKnown RBP18.18■□□□□ 0.5
CD55-209ENST00000488171 BBOF1Q8ND07 529 aa18.18■□□□□ 0.5
CD55-209ENST00000488171 M1APQ8TC57 530 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms