RNA–Protein interactions for RNA: ENST00000487927.5

TRIM8-204, Transcript of tripartite motif containing 8, humanhuman

TSL 3

Gene TRIM8, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-204ENST00000487927 MESP1Q9BRJ9 268 aa19.31■□□□□ 0.68
TRIM8-204ENST00000487927 DPH7Q9BTV6 452 aa19.31■□□□□ 0.68
TRIM8-204ENST00000487927 FAM107BQ9H098 131 aa19.31■□□□□ 0.68
TRIM8-204ENST00000487927 STOX2Q9P2F5 926 aaPredicted RBP19.31■□□□□ 0.68
TRIM8-204ENST00000487927 B3GNT3Q9Y2A9 372 aa19.31■□□□□ 0.68
TRIM8-204ENST00000487927 ACOT9Q9Y305 439 aa19.31■□□□□ 0.68
TRIM8-204ENST00000487927 IGKV1-8A0A0C4DH67 115 aa19.3■□□□□ 0.68
TRIM8-204ENST00000487927 E5RI56 91 aa19.3■□□□□ 0.68
TRIM8-204ENST00000487927 SNX3O60493 162 aa19.3■□□□□ 0.68
TRIM8-204ENST00000487927 PROCP04070 461 aa19.3■□□□□ 0.68
TRIM8-204ENST00000487927 ALPPP05187 535 aa19.3■□□□□ 0.68
TRIM8-204ENST00000487927 CMPK1P30085 196 aa19.3■□□□□ 0.68
TRIM8-204ENST00000487927 AIMP2Q13155 320 aaKnown RBP19.3■□□□□ 0.68
TRIM8-204ENST00000487927 MRPL49Q13405 166 aaKnown RBP19.3■□□□□ 0.68
TRIM8-204ENST00000487927 PRTGQ2VWP7 1150 aa19.3■□□□□ 0.68
TRIM8-204ENST00000487927 FHL5Q5TD97 284 aa19.3■□□□□ 0.68
TRIM8-204ENST00000487927 KIRREL2Q6UWL6 708 aa19.3■□□□□ 0.68
TRIM8-204ENST00000487927 PAQR7Q86WK9 346 aa19.3■□□□□ 0.68
TRIM8-204ENST00000487927 SMPDL3AQ92484 453 aa19.3■□□□□ 0.68
TRIM8-204ENST00000487927 SNRNP40Q96DI7 357 aaKnown RBP19.3■□□□□ 0.68
TRIM8-204ENST00000487927 ZFYVE21Q9BQ24 234 aa19.3■□□□□ 0.68
TRIM8-204ENST00000487927 FBXO6Q9NRD1 293 aaPredicted RBP19.3■□□□□ 0.68
TRIM8-204ENST00000487927 FGFR1OP2Q9NVK5 253 aa19.3■□□□□ 0.68
TRIM8-204ENST00000487927 NXT1Q9UKK6 140 aaKnown RBP19.3■□□□□ 0.68
TRIM8-204ENST00000487927 ERICH4A6NGS2 130 aa19.29■□□□□ 0.68
TRIM8-204ENST00000487927 SEMA7AO75326 666 aa19.29■□□□□ 0.68
TRIM8-204ENST00000487927 HAUS5O94927 633 aa19.29■□□□□ 0.68
TRIM8-204ENST00000487927 GRK2P25098 689 aa19.29■□□□□ 0.68
TRIM8-204ENST00000487927 ITGA3P26006 1051 aa19.29■□□□□ 0.68
TRIM8-204ENST00000487927 ARHGAP19Q14CB8 494 aa19.29■□□□□ 0.68
TRIM8-204ENST00000487927 CRB2Q5IJ48 1285 aa19.29■□□□□ 0.68
TRIM8-204ENST00000487927 PRAMEF13Q5VWM6 474 aa19.29■□□□□ 0.68
TRIM8-204ENST00000487927 NEK10Q6ZWH5 1172 aa19.29■□□□□ 0.68
TRIM8-204ENST00000487927 CMC1Q7Z7K0 106 aa19.29■□□□□ 0.68
TRIM8-204ENST00000487927 NUDCD3Q8IVD9 361 aa19.29■□□□□ 0.68
TRIM8-204ENST00000487927 CCDC63Q8NA47 563 aa19.29■□□□□ 0.68
TRIM8-204ENST00000487927 ZNF304Q9HCX3 659 aa19.29■□□□□ 0.68
TRIM8-204ENST00000487927 MRPS30Q9NP92 439 aaKnown RBP19.29■□□□□ 0.68
TRIM8-204ENST00000487927 CCDC189A1A4V9 331 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 H0YGG7 62 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 KLHL41O60662 606 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 IPO13O94829 963 aaKnown RBP19.28■□□□□ 0.68
TRIM8-204ENST00000487927 AGFG2O95081 481 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 TGDSO95455 350 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 CATP04040 527 aaKnown RBP19.28■□□□□ 0.68
TRIM8-204ENST00000487927 EIF2S1P05198 315 aaKnown RBP19.28■□□□□ 0.68
TRIM8-204ENST00000487927 RNF224P0DH78 156 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 TROVE2P10155 538 aaKnown RBP eCLIP19.28■□□□□ 0.68
TRIM8-204ENST00000487927 PNLIPRP1P54315 467 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 ARF3P61204 181 aaPredicted RBP19.28■□□□□ 0.68
TRIM8-204ENST00000487927 KLC1Q07866 573 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 ASPHQ12797 758 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 NAA25Q14CX7 972 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 RBBP7Q16576 425 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 CYHR1Q6ZMK1 362 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 Q6ZS92 163 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 SPATA21Q7Z572 469 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 TBC1D1Q86TI0 1168 aaPredicted RBP19.28■□□□□ 0.68
TRIM8-204ENST00000487927 GPATCH11Q8N954 259 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 FBXO15Q8NCQ5 510 aaPredicted RBP19.28■□□□□ 0.68
TRIM8-204ENST00000487927 PPFIBP2Q8ND30 876 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 OR11G2Q8NGC1 345 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 STT3BQ8TCJ2 826 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 ZNF480Q8WV37 535 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 KCNJ9Q92806 393 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 SEMA3GQ9NS98 782 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 ASF1BQ9NVP2 202 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 MAP10Q9P2G4 905 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 KLHL42Q9P2K6 505 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 TAC3Q9UHF0 121 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 EMCNQ9ULC0 261 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 CSAG2Q9Y5P2 127 aa19.28■□□□□ 0.68
TRIM8-204ENST00000487927 E7ENX8 843 aa19.27■□□□□ 0.68
TRIM8-204ENST00000487927 KLHL2O95198 593 aa19.27■□□□□ 0.68
TRIM8-204ENST00000487927 SLC16A8O95907 504 aa19.27■□□□□ 0.68
TRIM8-204ENST00000487927 SLC35E2BP0CK96 405 aa19.27■□□□□ 0.68
TRIM8-204ENST00000487927 VARSP26640 1264 aaKnown RBP19.27■□□□□ 0.68
TRIM8-204ENST00000487927 ALDH3A1P30838 453 aa19.27■□□□□ 0.68
TRIM8-204ENST00000487927 TAP2Q03519 686 aa19.27■□□□□ 0.68
TRIM8-204ENST00000487927 Q0VFX4 171 aa19.27■□□□□ 0.68
TRIM8-204ENST00000487927 FAM83EQ2M2I3 478 aa19.27■□□□□ 0.68
TRIM8-204ENST00000487927 MUM1Q2TAK8 710 aa19.27■□□□□ 0.68
TRIM8-204ENST00000487927 EIF2S3LQ2VIR3 472 aaKnown RBP19.27■□□□□ 0.68
TRIM8-204ENST00000487927 TTLL9Q3SXZ7 439 aa19.27■□□□□ 0.68
TRIM8-204ENST00000487927 HECTD2Q5U5R9 776 aa19.27■□□□□ 0.68
TRIM8-204ENST00000487927 ICE2Q659A1 982 aa19.27■□□□□ 0.68
TRIM8-204ENST00000487927 ZNF425Q6IV72 752 aa19.27■□□□□ 0.68
TRIM8-204ENST00000487927 PRMT9Q6P2P2 845 aa19.27■□□□□ 0.68
TRIM8-204ENST00000487927 KLC3Q6P597 504 aa19.27■□□□□ 0.68
TRIM8-204ENST00000487927 YTHDF3Q7Z739 585 aaKnown RBP19.27■□□□□ 0.68
TRIM8-204ENST00000487927 CUZD1Q86UP6 607 aa19.27■□□□□ 0.68
TRIM8-204ENST00000487927 LRRC56Q8IYG6 542 aaPredicted RBP19.27■□□□□ 0.68
TRIM8-204ENST00000487927 ZADH2Q8N4Q0 377 aa19.27■□□□□ 0.68
TRIM8-204ENST00000487927 CISD2Q8N5K1 135 aaKnown RBP19.27■□□□□ 0.68
TRIM8-204ENST00000487927 CD200R1Q8TD46 325 aa19.27■□□□□ 0.68
TRIM8-204ENST00000487927 ASB11Q8WXH4 323 aa19.27■□□□□ 0.68
TRIM8-204ENST00000487927 TM9SF4Q92544 642 aa19.27■□□□□ 0.68
TRIM8-204ENST00000487927 C7orf26Q96N11 449 aa19.27■□□□□ 0.68
TRIM8-204ENST00000487927 ELAC2Q9BQ52 826 aaKnown RBP19.27■□□□□ 0.68
TRIM8-204ENST00000487927 SLC29A3Q9BZD2 475 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms