RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 AARSD1Q9BTE6 412 aaKnown RBP8.05□□□□□ -1.12
PRKCB-208ENST00000487674 MMP25Q9NPA2 562 aa8.05□□□□□ -1.12
PRKCB-208ENST00000487674 CHST11Q9NPF2 352 aa8.05□□□□□ -1.12
PRKCB-208ENST00000487674 C20orf96Q9NUD7 363 aaPredicted RBP8.05□□□□□ -1.12
PRKCB-208ENST00000487674 TRMT6Q9UJA5 497 aaKnown RBP8.05□□□□□ -1.12
PRKCB-208ENST00000487674 SH3BGRL2Q9UJC5 107 aa8.05□□□□□ -1.12
PRKCB-208ENST00000487674 FBXO5Q9UKT4 447 aa8.05□□□□□ -1.12
PRKCB-208ENST00000487674 SH2B3Q9UQQ2 575 aa8.05□□□□□ -1.12
PRKCB-208ENST00000487674 SLC22A7Q9Y694 548 aa8.05□□□□□ -1.12
PRKCB-208ENST00000487674 MAD1L1Q9Y6D9 718 aa8.05□□□□□ -1.12
PRKCB-208ENST00000487674 NCOA6Q14686 2063 aaPredicted RBP8.05□□□□□ -1.12
PRKCB-208ENST00000487674 PKDREJQ9NTG1 2253 aa8.05□□□□□ -1.12
PRKCB-208ENST00000487674 PCNX1Q96RV3 2341 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 OTOGQ6ZRI0 2925 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 SCN3AQ9NY46 2000 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 ASPDHA6ND91 283 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 SGK494L7N484 410 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 TTI1O43156 1089 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 CDH1P12830 882 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 AGAP20933 346 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 IL10P22301 178 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 HTR1EP28566 365 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 GRK3P35626 688 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 RGS4P49798 205 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 SKP1P63208 163 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 RHAGQ02094 409 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 TUBA3CQ13748 450 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 ABRAXAS2Q15018 415 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 OR1C1Q15619 314 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 MEP1AQ16819 746 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 ZNF630Q2M218 657 aaPredicted RBP8.04□□□□□ -1.12
PRKCB-208ENST00000487674 HSP90AA5PQ58FG0 334 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 FCRLBQ6BAA4 426 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 CAPN13Q6MZZ7 669 aaPredicted RBP8.04□□□□□ -1.12
PRKCB-208ENST00000487674 UGT3A1Q6NUS8 523 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 TUBA3EQ6PEY2 450 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 PAPD4Q6PIY7 484 aaKnown RBP8.04□□□□□ -1.12
PRKCB-208ENST00000487674 AGTRAPQ6RW13 159 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 LCTLQ6UWM7 567 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 MBOAT1Q6ZNC8 495 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 PDSS2Q86YH6 399 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 CRLF3Q8IUI8 442 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 PALM2Q8IXS6 379 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 LGI4Q8N135 537 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 AGGF1Q8N302 714 aaeCLIP8.04□□□□□ -1.12
PRKCB-208ENST00000487674 SLC5A8Q8N695 610 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 AMER2Q8N7J2 671 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 TMEM178AQ8NBL3 297 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.04□□□□□ -1.12
PRKCB-208ENST00000487674 KCT2Q8NC54 265 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 M1APQ8TC57 530 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 THAP3Q8WTV1 239 aaPredicted RBP8.04□□□□□ -1.12
PRKCB-208ENST00000487674 SLC13A3Q8WWT9 602 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 MAGOHBQ96A72 148 aaKnown RBP8.04□□□□□ -1.12
PRKCB-208ENST00000487674 SCMH1Q96GD3 660 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 GPR137Q96N19 417 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 LPAR4Q99677 370 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 MACROD1Q9BQ69 325 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 UTP23Q9BRU9 249 aaKnown RBP8.04□□□□□ -1.12
PRKCB-208ENST00000487674 HAUS8Q9BT25 410 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 SGPP1Q9BX95 441 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 KCNK13Q9HB14 408 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 PARVBQ9HBI1 364 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 ADAMTS6Q9UKP5 1117 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 PDE10AQ9Y233 779 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 NAALAD2Q9Y3Q0 740 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 CACNA1CQ13936 2221 aa8.04□□□□□ -1.12
PRKCB-208ENST00000487674 FEZF1A0PJY2 475 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 OR2W5A6NFC9 320 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 GABRR3A8MPY1 467 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 MAGEB17A8MXT2 336 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 CDK2AP1O14519 115 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 SLC16A5O15375 505 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 NDUFS4O43181 175 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 HAUS5O94927 633 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 BMP2P12643 396 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 COX6B1P14854 86 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 PGAM1P18669 254 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 JAK1P23458 1154 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 EEF1DP29692 281 aaKnown RBP8.03□□□□□ -1.12
PRKCB-208ENST00000487674 CD96P40200 585 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 SMSP52788 366 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 TAS2R50P59544 299 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 SRSF11Q05519 484 aaKnown RBP8.03□□□□□ -1.12
PRKCB-208ENST00000487674 DHX9Q08211 1270 aaKnown RBP8.03□□□□□ -1.12
PRKCB-208ENST00000487674 NAE1Q13564 534 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 PWP1Q13610 501 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 USP10Q14694 798 aaKnown RBP8.03□□□□□ -1.12
PRKCB-208ENST00000487674 CRYMQ14894 314 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 HERC3Q15034 1050 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 NSDHLQ15738 373 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 C3AR1Q16581 482 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 CYP1B1Q16678 543 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 PHKG1Q16816 387 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 KRTCAP3Q53RY4 240 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 SFT2D3Q587I9 215 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 NIPAL1Q6NVV3 410 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 CCDC137Q6PK04 289 aaKnown RBP8.03□□□□□ -1.12
PRKCB-208ENST00000487674 XKRXQ6PP77 449 aa8.03□□□□□ -1.12
PRKCB-208ENST00000487674 Q6ZPB1 254 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms