RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 FOXP1Q9H334 677 aaPredicted RBP4.18□□□□□ -1.74
CNN3-206ENST00000487539 LRRC4Q9HBW1 653 aa4.18□□□□□ -1.74
CNN3-206ENST00000487539 NLRC4Q9NPP4 1024 aa4.18□□□□□ -1.74
CNN3-206ENST00000487539 AGPAT3Q9NRZ7 376 aa4.18□□□□□ -1.74
CNN3-206ENST00000487539 VANGL2Q9ULK5 521 aa4.18□□□□□ -1.74
CNN3-206ENST00000487539 SUFUQ9UMX1 484 aa4.18□□□□□ -1.74
CNN3-206ENST00000487539 SNX7Q9UNH6 387 aa4.18□□□□□ -1.74
CNN3-206ENST00000487539 UBE2J1Q9Y385 318 aaPredicted RBP4.18□□□□□ -1.74
CNN3-206ENST00000487539 DTNAQ9Y4J8 743 aa4.18□□□□□ -1.74
CNN3-206ENST00000487539 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.18□□□□□ -1.74
CNN3-206ENST00000487539 SYNJ2BP-COX16A0A087WUM0 186 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 A8MX80 341 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 I6L893 689 aaPredicted RBP4.17□□□□□ -1.74
CNN3-206ENST00000487539 O00370 1275 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 ADAM10O14672 748 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 XPO1O14980 1071 aaKnown RBP4.17□□□□□ -1.74
CNN3-206ENST00000487539 PHF1O43189 567 aaPredicted RBP4.17□□□□□ -1.74
CNN3-206ENST00000487539 CTIFO43310 598 aaKnown RBP4.17□□□□□ -1.74
CNN3-206ENST00000487539 SPRY1O43609 319 aaPredicted RBP4.17□□□□□ -1.74
CNN3-206ENST00000487539 CTAG2O75638 210 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 ADCY5O95622 1261 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 PLAUP00749 431 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 C9P02748 559 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 ANKRD34CP0C6C1 535 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 AGAP20933 346 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 DNASE1P24855 282 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 OTX2P32243 289 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 ABCD1P33897 745 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 ACTR1BP42025 376 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 VPS41P49754 854 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 SLC12A2P55011 1212 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 ACTR1AP61163 376 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 PPP2R2BQ00005 443 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 ZNF91Q05481 1191 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 TFF3Q07654 80 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 EIF4EBP2Q13542 120 aaPredicted RBP4.17□□□□□ -1.74
CNN3-206ENST00000487539 STIM1Q13586 685 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 IL11RAQ14626 422 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 TAF5Q15542 800 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 SGSM1Q2NKQ1 1148 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 EFHC1Q5JVL4 640 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 PLEKHS1Q5SXH7 462 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 C10orf25Q5T742 122 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 ARHGAP17Q68EM7 881 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 SHC4Q6S5L8 630 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 NELFCDQ8IXH7 590 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 SFRP1Q8N474 314 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 BCORP1Q8N888 145 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 NR4A3Q92570 626 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 RAB7BQ96AH8 199 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 EPSTI1Q96J88 318 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 SGCZQ96LD1 299 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 CCDC114Q96M63 670 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 FCRL5Q96RD9 977 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 ELAC2Q9BQ52 826 aaKnown RBP4.17□□□□□ -1.74
CNN3-206ENST00000487539 GPATCH1Q9BRR8 931 aaKnown RBP4.17□□□□□ -1.74
CNN3-206ENST00000487539 POLDIP3Q9BY77 421 aaKnown RBP4.17□□□□□ -1.74
CNN3-206ENST00000487539 GSDMCQ9BYG8 508 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 STK33Q9BYT3 514 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 TRIM2Q9C040 744 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 MIS12Q9H081 205 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 ARFGAP3Q9NP61 516 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 ELOVL5Q9NYP7 299 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 MPP6Q9NZW5 540 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 COX16Q9P0S2 106 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 TSPAN16Q9UKR8 245 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 MEMO1Q9Y316 297 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 ARID1AO14497 2285 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 MPDZO75970 2070 aa4.17□□□□□ -1.74
CNN3-206ENST00000487539 EPPK1P58107 5090 aaKnown RBP4.16□□□□□ -1.74
CNN3-206ENST00000487539 TRIM64A6NGJ6 449 aa4.16□□□□□ -1.74
CNN3-206ENST00000487539 TRIM64BA6NI03 449 aa4.16□□□□□ -1.74
CNN3-206ENST00000487539 J3KTA2 159 aa4.16□□□□□ -1.74
CNN3-206ENST00000487539 CACNB4O00305 520 aaPredicted RBP4.16□□□□□ -1.74
CNN3-206ENST00000487539 SOCS2O14508 198 aa4.16□□□□□ -1.74
CNN3-206ENST00000487539 ZW10O43264 779 aa4.16□□□□□ -1.74
CNN3-206ENST00000487539 SLC19A2O60779 497 aa4.16□□□□□ -1.74
CNN3-206ENST00000487539 RECQL5O94762 991 aaPredicted RBP4.16□□□□□ -1.74
CNN3-206ENST00000487539 PIGNO95427 931 aa4.16□□□□□ -1.74
CNN3-206ENST00000487539 LCA5LO95447 670 aa4.16□□□□□ -1.74
CNN3-206ENST00000487539 BMP15O95972 392 aa4.16□□□□□ -1.74
CNN3-206ENST00000487539 F10P00742 488 aa4.16□□□□□ -1.74
CNN3-206ENST00000487539 IGLV3-25P01717 112 aa4.16□□□□□ -1.74
CNN3-206ENST00000487539 TPOP07202 933 aa4.16□□□□□ -1.74
CNN3-206ENST00000487539 RHOCP08134 193 aa4.16□□□□□ -1.74
CNN3-206ENST00000487539 GAP43P17677 238 aa4.16□□□□□ -1.74
CNN3-206ENST00000487539 NDUFS1P28331 727 aa4.16□□□□□ -1.74
CNN3-206ENST00000487539 THBS4P35443 961 aa4.16□□□□□ -1.74
CNN3-206ENST00000487539 TRIM23P36406 574 aa4.16□□□□□ -1.74
CNN3-206ENST00000487539 UBA7P41226 1012 aa4.16□□□□□ -1.74
CNN3-206ENST00000487539 FASLGP48023 281 aa4.16□□□□□ -1.74
CNN3-206ENST00000487539 SERPINH1P50454 418 aaKnown RBP4.16□□□□□ -1.74
CNN3-206ENST00000487539 SMSP52788 366 aa4.16□□□□□ -1.74
CNN3-206ENST00000487539 PMP22Q01453 160 aa4.16□□□□□ -1.74
CNN3-206ENST00000487539 ILF3Q12906 894 aaKnown RBP eCLIP4.16□□□□□ -1.74
CNN3-206ENST00000487539 RAPGEF1Q13905 1077 aa4.16□□□□□ -1.74
CNN3-206ENST00000487539 RABEP1Q15276 862 aa4.16□□□□□ -1.74
CNN3-206ENST00000487539 DEFB113Q30KQ7 82 aa4.16□□□□□ -1.74
CNN3-206ENST00000487539 MYLK3Q32MK0 819 aa4.16□□□□□ -1.74
CNN3-206ENST00000487539 RUSC1-AS1Q66K80 236 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms