RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 NEIL2Q969S2 332 aa23.14■■□□□ 1.29
LIME1-206ENST00000487026 FAM129AQ9BZQ8 928 aa23.14■■□□□ 1.29
LIME1-206ENST00000487026 RNF32Q9H0A6 362 aa23.14■■□□□ 1.29
LIME1-206ENST00000487026 LANCL2Q9NS86 450 aa23.14■■□□□ 1.29
LIME1-206ENST00000487026 CORO1CQ9ULV4 474 aaPredicted RBP23.14■■□□□ 1.29
LIME1-206ENST00000487026 CROCCQ5TZA2 2017 aa23.14■■□□□ 1.29
LIME1-206ENST00000487026 SCN2AQ99250 2005 aa23.14■■□□□ 1.29
LIME1-206ENST00000487026 CRYBG3Q68DQ2 2970 aa23.14■■□□□ 1.29
LIME1-206ENST00000487026 CACNA1DQ01668 2161 aa23.13■■□□□ 1.29
LIME1-206ENST00000487026 CTAGE15A4D2H0 777 aa23.13■■□□□ 1.29
LIME1-206ENST00000487026 CDC7O00311 574 aa23.13■■□□□ 1.29
LIME1-206ENST00000487026 ARL4CP56559 192 aa23.13■■□□□ 1.29
LIME1-206ENST00000487026 GNG11P61952 73 aa23.13■■□□□ 1.29
LIME1-206ENST00000487026 RHAGQ02094 409 aa23.13■■□□□ 1.29
LIME1-206ENST00000487026 CSHL1Q14406 222 aa23.13■■□□□ 1.29
LIME1-206ENST00000487026 NSDHLQ15738 373 aa23.13■■□□□ 1.29
LIME1-206ENST00000487026 DEFB134Q4QY38 66 aa23.13■■□□□ 1.29
LIME1-206ENST00000487026 SFT2D3Q587I9 215 aa23.13■■□□□ 1.29
LIME1-206ENST00000487026 C1QL3Q5VWW1 255 aa23.13■■□□□ 1.29
LIME1-206ENST00000487026 SBSNQ6UWP8 590 aa23.13■■□□□ 1.29
LIME1-206ENST00000487026 CTAGE6Q86UF2 777 aa23.13■■□□□ 1.29
LIME1-206ENST00000487026 FJX1Q86VR8 437 aa23.13■■□□□ 1.29
LIME1-206ENST00000487026 AFAP1L2Q8N4X5 818 aa23.13■■□□□ 1.29
LIME1-206ENST00000487026 SUN3Q8TAQ9 357 aa23.13■■□□□ 1.29
LIME1-206ENST00000487026 SLC5A11Q8WWX8 675 aa23.13■■□□□ 1.29
LIME1-206ENST00000487026 ATL1Q8WXF7 558 aa23.13■■□□□ 1.29
LIME1-206ENST00000487026 NR4A3Q92570 626 aa23.13■■□□□ 1.29
LIME1-206ENST00000487026 TSLPQ969D9 159 aa23.13■■□□□ 1.29
LIME1-206ENST00000487026 SARGQ9BW04 601 aa23.13■■□□□ 1.29
LIME1-206ENST00000487026 KCNK13Q9HB14 408 aa23.13■■□□□ 1.29
LIME1-206ENST00000487026 TEKT2Q9UIF3 430 aa23.13■■□□□ 1.29
LIME1-206ENST00000487026 TRBC2A0A5B9 178 aa23.12■■□□□ 1.29
LIME1-206ENST00000487026 PRAMEF2O60811 474 aa23.12■■□□□ 1.29
LIME1-206ENST00000487026 CYC1P08574 325 aa23.12■■□□□ 1.29
LIME1-206ENST00000487026 AGTR2P50052 363 aa23.12■■□□□ 1.29
LIME1-206ENST00000487026 ACTN3Q08043 901 aaPredicted RBP23.12■■□□□ 1.29
LIME1-206ENST00000487026 ZNF460Q14592 562 aa23.12■■□□□ 1.29
LIME1-206ENST00000487026 FASTKD3Q14CZ7 662 aaKnown RBP23.12■■□□□ 1.29
LIME1-206ENST00000487026 ABRAXAS2Q15018 415 aa23.12■■□□□ 1.29
LIME1-206ENST00000487026 HERC3Q15034 1050 aa23.12■■□□□ 1.29
LIME1-206ENST00000487026 ACER2Q5QJU3 275 aa23.12■■□□□ 1.29
LIME1-206ENST00000487026 BEST3Q8N1M1 668 aa23.12■■□□□ 1.29
LIME1-206ENST00000487026 PLPP5Q8NEB5 264 aa23.12■■□□□ 1.29
LIME1-206ENST00000487026 LRRC39Q96DD0 335 aa23.12■■□□□ 1.29
LIME1-206ENST00000487026 PDLIM5Q96HC4 596 aaKnown RBP23.12■■□□□ 1.29
LIME1-206ENST00000487026 ZFATQ9P243 1243 aa23.12■■□□□ 1.29
LIME1-206ENST00000487026 NPEPPSL1A6NEC2 478 aa23.11■■□□□ 1.29
LIME1-206ENST00000487026 TP73O15350 636 aa23.11■■□□□ 1.29
LIME1-206ENST00000487026 CHST10O43529 356 aa23.11■■□□□ 1.29
LIME1-206ENST00000487026 MAN1A2O60476 641 aa23.11■■□□□ 1.29
LIME1-206ENST00000487026 GALR3O60755 368 aaPredicted RBP23.11■■□□□ 1.29
LIME1-206ENST00000487026 ZG16O60844 167 aa23.11■■□□□ 1.29
LIME1-206ENST00000487026 SEC31AO94979 1220 aaKnown RBP23.11■■□□□ 1.29
LIME1-206ENST00000487026 RASAL1O95294 804 aa23.11■■□□□ 1.29
LIME1-206ENST00000487026 STSP08842 583 aa23.11■■□□□ 1.29
LIME1-206ENST00000487026 ENO2P09104 434 aaPredicted RBP23.11■■□□□ 1.29
LIME1-206ENST00000487026 ZNF888P0CJ79 500 aaPredicted RBP23.11■■□□□ 1.29
LIME1-206ENST00000487026 ALOX12P18054 663 aa23.11■■□□□ 1.29
LIME1-206ENST00000487026 MST1P26927 711 aa23.11■■□□□ 1.29
LIME1-206ENST00000487026 HNF4AP41235 474 aa23.11■■□□□ 1.29
LIME1-206ENST00000487026 PMP22Q01453 160 aa23.11■■□□□ 1.29
LIME1-206ENST00000487026 MGAT5Q09328 741 aa23.11■■□□□ 1.29
LIME1-206ENST00000487026 PDIA2Q13087 525 aaKnown RBP23.11■■□□□ 1.29
LIME1-206ENST00000487026 PWP1Q13610 501 aa23.11■■□□□ 1.29
LIME1-206ENST00000487026 INAQ16352 499 aa23.11■■□□□ 1.29
LIME1-206ENST00000487026 H3F3CQ6NXT2 135 aa23.11■■□□□ 1.29
LIME1-206ENST00000487026 PAPD4Q6PIY7 484 aaKnown RBP23.11■■□□□ 1.29
LIME1-206ENST00000487026 GFRALQ6UXV0 394 aa23.11■■□□□ 1.29
LIME1-206ENST00000487026 STRA8Q7Z7C7 330 aa23.11■■□□□ 1.29
LIME1-206ENST00000487026 THOC6Q86W42 341 aaKnown RBP23.11■■□□□ 1.29
LIME1-206ENST00000487026 LURAP1LQ8IV03 231 aa23.11■■□□□ 1.29
LIME1-206ENST00000487026 FBXO36Q8NEA4 188 aa23.11■■□□□ 1.29
LIME1-206ENST00000487026 ZNF354BQ96LW1 612 aa23.11■■□□□ 1.29
LIME1-206ENST00000487026 NPAS2Q99743 824 aa23.11■■□□□ 1.29
LIME1-206ENST00000487026 ANKRD10Q9NXR5 420 aa23.11■■□□□ 1.29
LIME1-206ENST00000487026 WISP2O76076 250 aa23.1■■□□□ 1.29
LIME1-206ENST00000487026 ZNF37AP17032 561 aaPredicted RBP23.1■■□□□ 1.29
LIME1-206ENST00000487026 SCTRP47872 440 aa23.1■■□□□ 1.29
LIME1-206ENST00000487026 PER3P56645 1201 aa23.1■■□□□ 1.29
LIME1-206ENST00000487026 MRPS25P82663 173 aaKnown RBP23.1■■□□□ 1.29
LIME1-206ENST00000487026 PPP1R3AQ16821 1122 aa23.1■■□□□ 1.29
LIME1-206ENST00000487026 ZC3HC1Q86WB0 502 aaKnown RBP23.1■■□□□ 1.29
LIME1-206ENST00000487026 CRLF3Q8IUI8 442 aa23.1■■□□□ 1.29
LIME1-206ENST00000487026 TBC1D19Q8N5T2 526 aa23.1■■□□□ 1.29
LIME1-206ENST00000487026 M1APQ8TC57 530 aa23.1■■□□□ 1.29
LIME1-206ENST00000487026 RUNDC3BQ96NL0 473 aa23.1■■□□□ 1.29
LIME1-206ENST00000487026 ZFP69BQ9UJL9 534 aa23.1■■□□□ 1.29
LIME1-206ENST00000487026 SLC22A14Q9Y267 594 aa23.1■■□□□ 1.29
LIME1-206ENST00000487026 DYRK1BQ9Y463 629 aa23.1■■□□□ 1.29
LIME1-206ENST00000487026 SAR1BQ9Y6B6 198 aa23.1■■□□□ 1.29
LIME1-206ENST00000487026 FAM95CA0A1B0GW59 222 aa23.09■■□□□ 1.29
LIME1-206ENST00000487026 B4GALT2O60909 372 aa23.09■■□□□ 1.29
LIME1-206ENST00000487026 PIAS1O75925 651 aa23.09■■□□□ 1.29
LIME1-206ENST00000487026 UNC5CO95185 931 aa23.09■■□□□ 1.29
LIME1-206ENST00000487026 FHP07954 510 aa23.09■■□□□ 1.29
LIME1-206ENST00000487026 OR4D2P58180 307 aa23.09■■□□□ 1.29
LIME1-206ENST00000487026 TAS2R39P59534 338 aa23.09■■□□□ 1.29
LIME1-206ENST00000487026 RAB8AP61006 207 aa23.09■■□□□ 1.29
LIME1-206ENST00000487026 RGS1Q08116 209 aa23.09■■□□□ 1.29
LIME1-206ENST00000487026 FRG1Q14331 258 aaKnown RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms