RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 MACC1Q6ZN28 852 aa4.04□□□□□ -1.76
SMC4-218ENST00000486711 CPEB2Q7Z5Q1 589 aaKnown RBP4.04□□□□□ -1.76
SMC4-218ENST00000486711 GPC2Q8N158 579 aa4.04□□□□□ -1.76
SMC4-218ENST00000486711 RAB42Q8N4Z0 105 aa4.04□□□□□ -1.76
SMC4-218ENST00000486711 OR1L3Q8NH93 324 aa4.04□□□□□ -1.76
SMC4-218ENST00000486711 ATP6V0A1Q93050 837 aa4.04□□□□□ -1.76
SMC4-218ENST00000486711 CFAP36Q96G28 342 aa4.04□□□□□ -1.76
SMC4-218ENST00000486711 PANX3Q96QZ0 392 aa4.04□□□□□ -1.76
SMC4-218ENST00000486711 TBC1D13Q9NVG8 400 aa4.04□□□□□ -1.76
SMC4-218ENST00000486711 EPHA6Q9UF33 1036 aa4.04□□□□□ -1.76
SMC4-218ENST00000486711 ELF5Q9UKW6 265 aaPredicted RBP4.04□□□□□ -1.76
SMC4-218ENST00000486711 PCDHGA1Q9Y5H4 931 aa4.04□□□□□ -1.76
SMC4-218ENST00000486711 NPHP3Q7Z494 1330 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 C2orf92A0A1B0GVN3 265 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 ERI2A8K979 691 aaKnown RBP4.03□□□□□ -1.76
SMC4-218ENST00000486711 A8MVM7 634 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 SLCO1B7G3V0H7 640 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 H3BMM5 538 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 TEX28O15482 410 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 NME6O75414 186 aaPredicted RBP4.03□□□□□ -1.76
SMC4-218ENST00000486711 SEC24AO95486 1093 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 NADKO95544 446 aaPredicted RBP4.03□□□□□ -1.76
SMC4-218ENST00000486711 RNF224P0DH78 156 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 THEGLP0DJG4 465 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 CD59P13987 128 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 CPA3P15088 417 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 GOT1P17174 413 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 RPL35AP18077 110 aaKnown RBP4.03□□□□□ -1.76
SMC4-218ENST00000486711 ELAVL4P26378 380 aaKnown RBP4.03□□□□□ -1.76
SMC4-218ENST00000486711 RBMS1P29558 406 aaKnown RBP4.03□□□□□ -1.76
SMC4-218ENST00000486711 MAGEB1P43366 347 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 SLC3A1Q07837 685 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 ACTN3Q08043 901 aaPredicted RBP4.03□□□□□ -1.76
SMC4-218ENST00000486711 AP1B1Q10567 949 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 NPRL3Q12980 569 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 FCN2Q15485 313 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 PTPN14Q15678 1187 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 EXT1Q16394 746 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 FFAR4Q5NUL3 377 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 ZNF770Q6IQ21 691 aaPredicted RBP4.03□□□□□ -1.76
SMC4-218ENST00000486711 PSRC1Q6PGN9 363 aaPredicted RBP4.03□□□□□ -1.76
SMC4-218ENST00000486711 ARL10Q8N8L6 244 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 OR10G8Q8NGN5 311 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 ST7LQ8TDW4 575 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 UBE2Q2Q8WVN8 375 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 APOBEC4Q8WW27 367 aaKnown RBP4.03□□□□□ -1.76
SMC4-218ENST00000486711 CCDC47Q96A33 483 aaKnown RBP4.03□□□□□ -1.76
SMC4-218ENST00000486711 PDLIM5Q96HC4 596 aaKnown RBP4.03□□□□□ -1.76
SMC4-218ENST00000486711 MAGED4Q96JG8 741 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 C10orf90Q96M02 699 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 F2RL3Q96RI0 385 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 RASL10BQ96S79 203 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 ZNF559Q9BR84 538 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 P2RY12Q9H244 342 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 PANK4Q9NVE7 773 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 COMMD8Q9NX08 183 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 FBXL4Q9UKA2 621 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 PPP2R2CQ9Y2T4 447 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 SELENOKQ9Y6D0 94 aa4.03□□□□□ -1.76
SMC4-218ENST00000486711 A0A087WUV0 522 aaPredicted RBP4.02□□□□□ -1.77
SMC4-218ENST00000486711 A0A0U1RQG5 324 aaPredicted RBP4.02□□□□□ -1.77
SMC4-218ENST00000486711 AKAP3O75969 853 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 LETM1O95202 739 aaPredicted RBP4.02□□□□□ -1.77
SMC4-218ENST00000486711 RAF1P04049 648 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 HMOX1P09601 288 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 KRT3P12035 628 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 STMN1P16949 149 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 DUTP33316 252 aaKnown RBP4.02□□□□□ -1.77
SMC4-218ENST00000486711 SERPINH1P50454 418 aaKnown RBP4.02□□□□□ -1.77
SMC4-218ENST00000486711 NR0B1P51843 470 aaKnown RBP4.02□□□□□ -1.77
SMC4-218ENST00000486711 DCDC1P59894 354 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 CBX3Q13185 183 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 HNRNPDQ14103 355 aaKnown RBP4.02□□□□□ -1.77
SMC4-218ENST00000486711 RPS6KA1Q15418 735 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 AARDQ4LEZ3 155 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 AGAP6Q5VW22 663 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 PRAMEF8Q5VWM4 474 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 APLFQ8IW19 511 aaPredicted RBP4.02□□□□□ -1.77
SMC4-218ENST00000486711 ZNF444Q8N0Y2 327 aaPredicted RBP4.02□□□□□ -1.77
SMC4-218ENST00000486711 TCEANCQ8N8B7 351 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 NAT8LQ8N9F0 302 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 SMYD1Q8NB12 490 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 OR5AP2Q8NGF4 316 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 SNX21Q969T3 373 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 RFT1Q96AA3 541 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 LGALS12Q96DT0 336 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 C5orf30Q96GV9 206 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 NECTIN4Q96NY8 510 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 PRMT1Q99873 361 aaKnown RBP4.02□□□□□ -1.77
SMC4-218ENST00000486711 FSD1Q9BTV5 496 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 FUCA2Q9BTY2 467 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 OSBPL8Q9BZF1 889 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 SLC39A8Q9C0K1 460 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 EGLN3Q9H6Z9 239 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 ATP13A3Q9H7F0 1226 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 ZNF71Q9NQZ8 489 aaPredicted RBP4.02□□□□□ -1.77
SMC4-218ENST00000486711 HACD3Q9P035 362 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 POLKQ9UBT6 870 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 MOSPD1Q9UJG1 213 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 PILRBQ9UKJ0 227 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms