RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 MOCOSQ96EN8 888 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 ZNF285Q96NJ3 590 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 CENPKQ9BS16 269 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 GATA5Q9BWX5 397 aaPredicted RBP10.86□□□□□ -0.67
NUP50-216ENST00000486184 DHCR7Q9UBM7 475 aaKnown RBP10.86□□□□□ -0.67
NUP50-216ENST00000486184 CDC14AQ9UNH5 594 aa10.86□□□□□ -0.67
NUP50-216ENST00000486184 TMEM184BQ9Y519 407 aaPredicted RBP10.86□□□□□ -0.67
NUP50-216ENST00000486184 A0A088AWK7 358 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 A0A1B0GX78 115 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 TMEM114B3SHH9 223 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 H0YIV9 168 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 FFAR3O14843 346 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 DSCR3O14972 297 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 GPR42O15529 346 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 RAD1O60671 282 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 PRAMEF4O60810 478 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 CLEC3AO75596 197 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 ESRRBO95718 433 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 HSPA4LO95757 839 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 CHEK2O96017 543 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 KRT6AP02538 564 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 KRT6BP04259 564 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 SERPINE1P05121 402 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 CTSBP07858 339 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 SERPINA6P08185 405 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 DHRS4L1P0CG22 281 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 LIPCP11150 499 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 PIM1P11309 404 aaPredicted RBP10.85□□□□□ -0.67
NUP50-216ENST00000486184 ZNF28P17035 718 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 NR1D1P20393 614 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 ZNF10P21506 573 aaPredicted RBP10.85□□□□□ -0.67
NUP50-216ENST00000486184 GRK2P25098 689 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 AVPR1BP47901 424 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 KRT6CP48668 564 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 RAP1GDS1P52306 607 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 ABHD18Q0P651 414 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 MPP2Q14168 576 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 MAP7Q14244 749 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 PRTGQ2VWP7 1150 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 TOR1AIP1Q5JTV8 583 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 PRAMEF17Q5VTA0 474 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 C1orf189Q5VU69 101 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 PRAMEF9Q5VWM5 478 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 RHBDD2Q6NTF9 364 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 NIPAL1Q6NVV3 410 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 UNQ6494/PRO21346Q6UXR6 183 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 SYVN1Q86TM6 617 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 LAS2Q8IYD9 372 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 CACNA2D3Q8IZS8 1091 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 IL22RA1Q8N6P7 574 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 ZNF248Q8NDW4 579 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 OR7G3Q8NG95 312 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 METTL6Q8TCB7 284 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 PROKR1Q8TCW9 393 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 AGAP11Q8TF27 550 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 GATA6Q92908 595 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 FGF11Q92914 225 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 MR1Q95460 341 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 KIAA1143Q96AT1 154 aaPredicted RBP10.85□□□□□ -0.67
NUP50-216ENST00000486184 TM4SF19Q96DZ7 209 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 CMTM7Q96FZ5 175 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 FAR2Q96K12 515 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 MTERF1Q99551 399 aaKnown RBP10.85□□□□□ -0.67
NUP50-216ENST00000486184 MACROD1Q9BQ69 325 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 C17orf62Q9BQA9 187 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 DPH2Q9BQC3 489 aaPredicted RBP10.85□□□□□ -0.67
NUP50-216ENST00000486184 SLC29A3Q9BZD2 475 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 SHCBP1LQ9BZQ2 653 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 RHBGQ9H310 441 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 COPS7BQ9H9Q2 264 aaPredicted RBP10.85□□□□□ -0.67
NUP50-216ENST00000486184 ANKHQ9HCJ1 492 aa10.85□□□□□ -0.67
NUP50-216ENST00000486184 GPN3Q9UHW5 284 aaPredicted RBP10.85□□□□□ -0.67
NUP50-216ENST00000486184 ZNF490Q9ULM2 529 aaPredicted RBP10.85□□□□□ -0.67
NUP50-216ENST00000486184 C9J4A7 227 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 H3BMH7 237 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 MEN1O00255 615 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 PPP6CO00743 305 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 SNUPNO95149 360 aaKnown RBP10.84□□□□□ -0.67
NUP50-216ENST00000486184 DLGAP3O95886 979 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 CAPN1P07384 714 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 BGNP21810 368 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 PIK3CBP42338 1070 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 DCDP81605 110 aaKnown RBP10.84□□□□□ -0.67
NUP50-216ENST00000486184 HERC3Q15034 1050 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 SGO1Q5FBB7 561 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 FRG2Q64ET8 278 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 ATG16L1Q676U5 607 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 LETMD1Q6P1Q0 360 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 PRMT9Q6P2P2 845 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 TRIM40Q6P9F5 258 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 CHSY3Q70JA7 882 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 CUZD1Q86UP6 607 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 DSELQ8IZU8 1212 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 AFAP1L2Q8N4X5 818 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 METTL27Q8N6F8 245 aaPredicted RBP10.84□□□□□ -0.67
NUP50-216ENST00000486184 ARFGAP2Q8N6H7 521 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 KCT2Q8NC54 265 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 SRFBP1Q8NEF9 429 aaKnown RBP10.84□□□□□ -0.67
NUP50-216ENST00000486184 HUS1BQ8NHY5 278 aa10.84□□□□□ -0.67
NUP50-216ENST00000486184 KCNE4Q8WWG9 221 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms