RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 VSTM2BA6NLU5 285 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 H0YIG0 161 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 K7EPI3 171 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 HAX1O00165 279 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 PEX12O00623 359 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 NDUFS4O43181 175 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 RFPL1O75677 317 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 IGHEP01854 428 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 GSTM2P28161 218 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 AGTR2P50052 363 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 IRF8Q02556 426 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 LAPTM5Q13571 262 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 LY6DQ14210 128 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 SLBPQ14493 270 aaKnown RBP eCLIP11.82□□□□□ -0.52
HMG20B-211ENST00000486028 HERC3Q15034 1050 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 SETDB1Q15047 1291 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 HIST2H2ACQ16777 129 aaPredicted RBP11.82□□□□□ -0.52
HMG20B-211ENST00000486028 XKR6Q5GH73 641 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 TECRLQ5HYJ1 363 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 PAGE2BQ5JRK9 111 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 HIST2H2AA3Q6FI13 130 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 WDR93Q6P2C0 686 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 TMIGD1Q6UXZ0 262 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 LCA5Q86VQ0 697 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 APLFQ8IW19 511 aaPredicted RBP11.82□□□□□ -0.52
HMG20B-211ENST00000486028 KCT2Q8NC54 265 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 OR9A4Q8NGU2 314 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 STT3BQ8TCJ2 826 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 MIEF2Q96C03 454 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 WDR34Q96EX3 536 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 PTCD3Q96EY7 689 aaKnown RBP11.82□□□□□ -0.52
HMG20B-211ENST00000486028 SEC16BQ96JE7 1060 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 MRPL57Q9BQC6 102 aaKnown RBP11.82□□□□□ -0.52
HMG20B-211ENST00000486028 EFCAB11Q9BUY7 163 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 SPNS1Q9H2V7 528 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 MKKSQ9NPJ1 570 aaPredicted RBP11.82□□□□□ -0.52
HMG20B-211ENST00000486028 ZNF358Q9NW07 568 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 CPSF2Q9P2I0 782 aaKnown RBP11.82□□□□□ -0.52
HMG20B-211ENST00000486028 TUBD1Q9UJT1 453 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 MRPS2Q9Y399 296 aaKnown RBP11.82□□□□□ -0.52
HMG20B-211ENST00000486028 ANGPTL3Q9Y5C1 460 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 TNPO3Q9Y5L0 923 aaKnown RBP11.82□□□□□ -0.52
HMG20B-211ENST00000486028 FER1L5A0AVI2 2057 aa11.82□□□□□ -0.52
HMG20B-211ENST00000486028 SPTA1P02549 2419 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 IGLV3-12A0A075B6K2 115 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 URADA6NGE7 173 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 KLK8O60259 260 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 SMIM24O75264 130 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 NSA2O95478 260 aaKnown RBP11.81□□□□□ -0.52
HMG20B-211ENST00000486028 SHBGP04278 402 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 UMODP07911 640 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 SERPINA6P08185 405 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 ZGLP1P0C6A0 271 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 EPB42P16452 691 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 MMP11P24347 488 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 CASP2P42575 452 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 RRADP55042 308 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 SKP1P63208 163 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 KCNAB2Q13303 367 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 DOC2AQ14183 400 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 TBCCQ15814 346 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 NIPAL1Q6NVV3 410 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 METTL2BQ6P1Q9 378 aaKnown RBP11.81□□□□□ -0.52
HMG20B-211ENST00000486028 EMBQ6PCB8 327 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 SHISA6Q6ZSJ9 500 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 MED25Q71SY5 747 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 ABHD13Q7L211 337 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 MRGPREQ86SM8 312 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 TEX9Q8N6V9 391 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 AMER3Q8N944 861 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 TMEM102Q8N9M5 508 aaPredicted RBP11.81□□□□□ -0.52
HMG20B-211ENST00000486028 ANKRD53Q8N9V6 530 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 ZCCHC10Q8TBK6 192 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 ACMSDQ8TDX5 336 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 UBE2E3Q969T4 207 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 MOCOSQ96EN8 888 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 VPS50Q96JG6 964 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 SPSB2Q99619 263 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 CRB3Q9BUF7 120 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 TGIF2Q9GZN2 237 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 ING2Q9H160 280 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 MRPL46Q9H2W6 279 aaKnown RBP11.81□□□□□ -0.52
HMG20B-211ENST00000486028 SOX17Q9H6I2 414 aaPredicted RBP11.81□□□□□ -0.52
HMG20B-211ENST00000486028 ACSS2Q9NR19 701 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 SEMA3GQ9NS98 782 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 C14orf105Q9NVL8 296 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 TBK1Q9UHD2 729 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 MAP4K5Q9Y4K4 846 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 ASB1Q9Y576 335 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 KALRNO60229 2985 aa11.81□□□□□ -0.52
HMG20B-211ENST00000486028 ANKDD1BA6NHY2 528 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 ARGFXA6NJG6 315 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 MKRN2OSH3BPM6 223 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 SGK494L7N484 410 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 PRAMEF4O60810 478 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 KLHL18O94889 574 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 ALOX12P18054 663 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 IL1RNP18510 177 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 EPORP19235 508 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 HPDP32754 393 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms