RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 SLC9A5Q14940 896 aa16.88■□□□□ 0.29
SREBF1-213ENST00000485080 LINC00303Q3SY05 128 aa16.88■□□□□ 0.29
SREBF1-213ENST00000485080 XKR6Q5GH73 641 aa16.88■□□□□ 0.29
SREBF1-213ENST00000485080 APLFQ8IW19 511 aaPredicted RBP16.88■□□□□ 0.29
SREBF1-213ENST00000485080 DTWD1Q8N5C7 304 aa16.88■□□□□ 0.29
SREBF1-213ENST00000485080 AMER3Q8N944 861 aa16.88■□□□□ 0.29
SREBF1-213ENST00000485080 KCT2Q8NC54 265 aa16.88■□□□□ 0.29
SREBF1-213ENST00000485080 UBE2E3Q969T4 207 aa16.88■□□□□ 0.29
SREBF1-213ENST00000485080 COL26A1Q96A83 441 aa16.88■□□□□ 0.29
SREBF1-213ENST00000485080 SCYL1Q96KG9 808 aa16.88■□□□□ 0.29
SREBF1-213ENST00000485080 TMEM109Q9BVC6 243 aa16.88■□□□□ 0.29
SREBF1-213ENST00000485080 C1QTNF3Q9BXJ4 246 aa16.88■□□□□ 0.29
SREBF1-213ENST00000485080 MKKSQ9NPJ1 570 aaPredicted RBP16.88■□□□□ 0.29
SREBF1-213ENST00000485080 CPSF2Q9P2I0 782 aaKnown RBP16.88■□□□□ 0.29
SREBF1-213ENST00000485080 ZNF282Q9UDV7 671 aaPredicted RBP16.88■□□□□ 0.29
SREBF1-213ENST00000485080 TBK1Q9UHD2 729 aa16.88■□□□□ 0.29
SREBF1-213ENST00000485080 ZNF490Q9ULM2 529 aaPredicted RBP16.88■□□□□ 0.29
SREBF1-213ENST00000485080 MRPS2Q9Y399 296 aaKnown RBP16.88■□□□□ 0.29
SREBF1-213ENST00000485080 PTRH2Q9Y3E5 179 aaKnown RBP16.88■□□□□ 0.29
SREBF1-213ENST00000485080 TSC22D4Q9Y3Q8 395 aa16.88■□□□□ 0.29
SREBF1-213ENST00000485080 MED13Q9UHV7 2174 aa16.88■□□□□ 0.29
SREBF1-213ENST00000485080 CDC14CA4D256 554 aa16.87■□□□□ 0.29
SREBF1-213ENST00000485080 URADA6NGE7 173 aa16.87■□□□□ 0.29
SREBF1-213ENST00000485080 E2F3O00716 465 aa16.87■□□□□ 0.29
SREBF1-213ENST00000485080 CLEC3AO75596 197 aa16.87■□□□□ 0.29
SREBF1-213ENST00000485080 SMIM10L1P0DMW3 83 aa16.87■□□□□ 0.29
SREBF1-213ENST00000485080 CD22P20273 847 aa16.87■□□□□ 0.29
SREBF1-213ENST00000485080 SKP1P63208 163 aa16.87■□□□□ 0.29
SREBF1-213ENST00000485080 HYAL2Q12891 473 aa16.87■□□□□ 0.29
SREBF1-213ENST00000485080 CHIT1Q13231 466 aa16.87■□□□□ 0.29
SREBF1-213ENST00000485080 RBBP5Q15291 538 aaKnown RBP16.87■□□□□ 0.29
SREBF1-213ENST00000485080 ATP1A1-AS1Q5TC04 95 aa16.87■□□□□ 0.29
SREBF1-213ENST00000485080 RAB43Q86YS6 212 aa16.87■□□□□ 0.29
SREBF1-213ENST00000485080 CYP4X1Q8N118 509 aa16.87■□□□□ 0.29
SREBF1-213ENST00000485080 PTGR2Q8N8N7 351 aaPredicted RBP16.87■□□□□ 0.29
SREBF1-213ENST00000485080 STT3BQ8TCJ2 826 aa16.87■□□□□ 0.29
SREBF1-213ENST00000485080 EPS8L3Q8TE67 593 aaKnown RBP16.87■□□□□ 0.29
SREBF1-213ENST00000485080 APOBEC4Q8WW27 367 aaKnown RBP16.87■□□□□ 0.29
SREBF1-213ENST00000485080 EXTL1Q92935 676 aa16.87■□□□□ 0.29
SREBF1-213ENST00000485080 MOCOSQ96EN8 888 aa16.87■□□□□ 0.29
SREBF1-213ENST00000485080 MMABQ96EY8 250 aaPredicted RBP16.87■□□□□ 0.29
SREBF1-213ENST00000485080 SMIM10Q96HG1 83 aa16.87■□□□□ 0.29
SREBF1-213ENST00000485080 MACROD1Q9BQ69 325 aa16.87■□□□□ 0.29
SREBF1-213ENST00000485080 ADNPQ9H2P0 1102 aa16.87■□□□□ 0.29
SREBF1-213ENST00000485080 ANKHQ9HCJ1 492 aa16.87■□□□□ 0.29
SREBF1-213ENST00000485080 C14orf105Q9NVL8 296 aa16.87■□□□□ 0.29
SREBF1-213ENST00000485080 TMEM216Q9P0N5 145 aa16.87■□□□□ 0.29
SREBF1-213ENST00000485080 CTSFQ9UBX1 484 aa16.87■□□□□ 0.29
SREBF1-213ENST00000485080 TUBD1Q9UJT1 453 aa16.87■□□□□ 0.29
SREBF1-213ENST00000485080 KCNMB2Q9Y691 235 aa16.87■□□□□ 0.29
SREBF1-213ENST00000485080 MAU2Q9Y6X3 613 aa16.87■□□□□ 0.29
SREBF1-213ENST00000485080 A0A0A6YYC8 382 aaPredicted RBP16.86■□□□□ 0.29
SREBF1-213ENST00000485080 A0A1W2PPM1 405 aa16.86■□□□□ 0.29
SREBF1-213ENST00000485080 I3L1I5 382 aaPredicted RBP16.86■□□□□ 0.29
SREBF1-213ENST00000485080 PCDH17O14917 1159 aa16.86■□□□□ 0.29
SREBF1-213ENST00000485080 IGHEP01854 428 aa16.86■□□□□ 0.29
SREBF1-213ENST00000485080 CYC1P08574 325 aa16.86■□□□□ 0.29
SREBF1-213ENST00000485080 ZGLP1P0C6A0 271 aa16.86■□□□□ 0.29
SREBF1-213ENST00000485080 ALOX12P18054 663 aa16.86■□□□□ 0.29
SREBF1-213ENST00000485080 MMP11P24347 488 aa16.86■□□□□ 0.29
SREBF1-213ENST00000485080 SERPINB1P30740 379 aa16.86■□□□□ 0.29
SREBF1-213ENST00000485080 HPDP32754 393 aaPredicted RBP16.86■□□□□ 0.29
SREBF1-213ENST00000485080 CRHR1P34998 444 aa16.86■□□□□ 0.29
SREBF1-213ENST00000485080 HNF4AP41235 474 aa16.86■□□□□ 0.29
SREBF1-213ENST00000485080 CCR10P46092 362 aa16.86■□□□□ 0.29
SREBF1-213ENST00000485080 SLCO1A2P46721 670 aa16.86■□□□□ 0.29
SREBF1-213ENST00000485080 SNRPNP63162 240 aaKnown RBP16.86■□□□□ 0.29
SREBF1-213ENST00000485080 OCA2Q04671 838 aa16.86■□□□□ 0.29
SREBF1-213ENST00000485080 GTF2H2Q13888 395 aa16.86■□□□□ 0.29
SREBF1-213ENST00000485080 HIST2H2ACQ16777 129 aaPredicted RBP16.86■□□□□ 0.29
SREBF1-213ENST00000485080 DEFB109BQ30KR1 87 aa16.86■□□□□ 0.29
SREBF1-213ENST00000485080 ADPRMQ3LIE5 342 aa16.86■□□□□ 0.29
SREBF1-213ENST00000485080 LIPJQ5W064 366 aa16.86■□□□□ 0.29
SREBF1-213ENST00000485080 HIST2H2AA3Q6FI13 130 aa16.86■□□□□ 0.29
SREBF1-213ENST00000485080 GTF2H2CQ6P1K8 395 aa16.86■□□□□ 0.29
SREBF1-213ENST00000485080 ABHD13Q7L211 337 aa16.86■□□□□ 0.29
SREBF1-213ENST00000485080 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.86■□□□□ 0.294e-6■■■□□ 18.1
SREBF1-213ENST00000485080 LAS2Q8IYD9 372 aa16.86■□□□□ 0.29
SREBF1-213ENST00000485080 METTL27Q8N6F8 245 aaPredicted RBP16.86■□□□□ 0.29
SREBF1-213ENST00000485080 TEX9Q8N6V9 391 aa16.86■□□□□ 0.29
SREBF1-213ENST00000485080 OR9A4Q8NGU2 314 aa16.86■□□□□ 0.29
SREBF1-213ENST00000485080 SEMA3GQ9NS98 782 aa16.86■□□□□ 0.29
SREBF1-213ENST00000485080 LGALS13Q9UHV8 139 aa16.86■□□□□ 0.29
SREBF1-213ENST00000485080 LRIT2A6NDA9 550 aa16.85■□□□□ 0.29
SREBF1-213ENST00000485080 GALR3O60755 368 aaPredicted RBP16.85■□□□□ 0.29
SREBF1-213ENST00000485080 SIX3O95343 332 aaPredicted RBP16.85■□□□□ 0.29
SREBF1-213ENST00000485080 TBX6O95947 436 aaPredicted RBP16.85■□□□□ 0.29
SREBF1-213ENST00000485080 STATHP02808 62 aa16.85■□□□□ 0.29
SREBF1-213ENST00000485080 RPS17P08708 135 aaKnown RBP16.85■□□□□ 0.29
SREBF1-213ENST00000485080 SFTPCP11686 197 aa16.85■□□□□ 0.29
SREBF1-213ENST00000485080 KRT15P19012 456 aa16.85■□□□□ 0.29
SREBF1-213ENST00000485080 IL10P22301 178 aa16.85■□□□□ 0.29
SREBF1-213ENST00000485080 STXBP1P61764 594 aaKnown RBP16.85■□□□□ 0.29
SREBF1-213ENST00000485080 SLC18A2Q05940 514 aa16.85■□□□□ 0.29
SREBF1-213ENST00000485080 FAM69BQ5VUD6 431 aa16.85■□□□□ 0.29
SREBF1-213ENST00000485080 GRHL2Q6ISB3 625 aa16.85■□□□□ 0.29
SREBF1-213ENST00000485080 MED25Q71SY5 747 aa16.85■□□□□ 0.29
SREBF1-213ENST00000485080 VN1R5Q7Z5H4 357 aa16.85■□□□□ 0.29
SREBF1-213ENST00000485080 MRGPREQ86SM8 312 aa16.85■□□□□ 0.29
SREBF1-213ENST00000485080 PDSS2Q86YH6 399 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms