RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 MAT1AQ00266 395 aaKnown RBP12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 IRF8Q02556 426 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 RGS1Q08116 209 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 TBCCQ15814 346 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 SYT16Q17RD7 645 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 BORAQ6PGQ7 559 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 GOLGA7Q7Z5G4 137 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 KRT78Q8N1N4 520 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 AFAP1L2Q8N4X5 818 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 TRPV3Q8NET8 790 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 STT3BQ8TCJ2 826 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 EFCAB11Q9BUY7 163 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 SLC6A16Q9GZN6 736 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 PITHD1Q9GZP4 211 aaPredicted RBP12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 SOX17Q9H6I2 414 aaPredicted RBP12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 NT5DC2Q9H857 520 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 TRPC4Q9UBN4 977 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 ZNF282Q9UDV7 671 aaPredicted RBP12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 TMCO1Q9UM00 188 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 TNPO3Q9Y5L0 923 aaKnown RBP12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 KCNMB2Q9Y691 235 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 CACNA1BQ00975 2339 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 TLDC2A0PJX2 215 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 H0YIG0 161 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 SGK494L7N484 410 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 ATXN7O15265 892 aaPredicted RBP12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 PRPF4O43172 522 aaKnown RBP eCLIP12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 RDH16O75452 317 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 KLHL18O94889 574 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 SERPINA6P08185 405 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 GSTA1P08263 222 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 ZGLP1P0C6A0 271 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 ZNF888P0CJ79 500 aaPredicted RBP12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 KRT15P19012 456 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 OTX2P32243 289 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 AVPR1BP47901 424 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 GTF2H2Q13888 395 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 SSPNQ14714 243 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 VWA2Q5GFL6 755 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 GTF2H2CQ6P1K8 395 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 METTL2BQ6P1Q9 378 aaKnown RBP12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 RPS27LQ71UM5 84 aaKnown RBP12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 ZC3H7AQ8IWR0 971 aaKnown RBP12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 PRSS58Q8IYP2 241 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 EXD3Q8N9H8 876 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 TTLQ8NG68 377 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 UTP15Q8TED0 518 aaKnown RBP12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 THAP4Q8WY91 577 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 NSUN5Q96P11 429 aaKnown RBP12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 KLHL31Q9H511 634 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 ANKHQ9HCJ1 492 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 NXT1Q9UKK6 140 aaKnown RBP12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 PCTPQ9UKL6 214 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 EMCNQ9ULC0 261 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 PLAAQ9Y263 795 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 MAN2B2Q9Y2E5 1009 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 NAALAD2Q9Y3Q0 740 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 MAP4K5Q9Y4K4 846 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 ANGPTL3Q9Y5C1 460 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 MGAQ8IWI9 3026 aa12.87□□□□□ -0.35
SOX2-OT-209ENST00000485035 ZNF860A6NHJ4 632 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 OR7A17O14581 309 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 DLX3O60479 287 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 GALR3O60755 368 aaPredicted RBP12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 CLEC3AO75596 197 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 TUBBP07437 444 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 RPS17P08708 135 aaKnown RBP12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 FAM87AP0C7U9 286 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 ALOX12P18054 663 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 GSTM2P28161 218 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 HNRNPH1P31943 449 aaKnown RBP12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 HNF4AP41235 474 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 POLE2P56282 527 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 OCA2Q04671 838 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 KLC1Q07866 573 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 IFFO1Q0D2I5 559 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 LAPTM5Q13571 262 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 ATP1A4Q13733 1029 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 LY6DQ14210 128 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 HERC3Q15034 1050 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 DEFB134Q4QY38 66 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 SOWAHCQ53LP3 525 aaPredicted RBP12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 PAGE2BQ5JRK9 111 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 TOR1AIP1Q5JTV8 583 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 CPZQ66K79 652 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 GRHL2Q6ISB3 625 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 PPP1R32Q7Z5V6 425 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 MRGPREQ86SM8 312 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 LAPTM4BQ86VI4 370 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 RAB43Q86YS6 212 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 LAS2Q8IYD9 372 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 OR52B6Q8NGF0 335 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 OR5T3Q8NGG3 340 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 APOBEC4Q8WW27 367 aaKnown RBP12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 CCT6BQ92526 530 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 MIEF2Q96C03 454 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 WBP1Q96G27 269 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 SEC16BQ96JE7 1060 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 MESP1Q9BRJ9 268 aa12.86□□□□□ -0.35
SOX2-OT-209ENST00000485035 YIPF2Q9BWQ6 316 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms