RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 ZNF57Q68EA5 555 aaPredicted RBP12.26□□□□□ -0.45
VPS52-218ENST00000482399 SERINC5Q86VE9 423 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 ZNF683Q8IZ20 524 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 ZFP41Q8N8Y5 198 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 C19orf18Q8NEA5 215 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 CSGALNACT1Q8TDX6 532 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 TMEM159Q96B96 161 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 ART5Q96L15 291 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 YME1L1Q96TA2 773 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 C2orf49Q9BVC5 232 aaPredicted RBP12.26□□□□□ -0.45
VPS52-218ENST00000482399 CDADC1Q9BWV3 514 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 OR51B5Q9H339 312 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 DNMT3BQ9UBC3 853 aaKnown RBP12.26□□□□□ -0.45
VPS52-218ENST00000482399 TRPC4Q9UBN4 977 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 PCDH17O14917 1159 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 STC2O76061 302 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 HOXA9P31269 272 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 C2orf80Q0P641 193 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 LRRC26Q2I0M4 334 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 IQCCQ4KMZ1 466 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 IFI44LQ53G44 452 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 TXNDC8Q6A555 127 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 ERICH5Q6P6B1 374 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 TAS1R1Q7RTX1 841 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 ZNF551Q7Z340 670 aaPredicted RBP12.26□□□□□ -0.45
VPS52-218ENST00000482399 ADCK2Q7Z695 626 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 FCGR1BQ92637 280 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 PKMYT1Q99640 499 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 COQ7Q99807 217 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 ABCB8Q9NUT2 735 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 TMEM184CQ9NVA4 438 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 ISPDA4D126 451 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 FABP12A6NFH5 140 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 M0R082 166 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 HAT1O14929 419 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 KLK8O60259 260 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 ZNF623O75123 536 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 DUSP11O75319 330 aaKnown RBP12.26□□□□□ -0.45
VPS52-218ENST00000482399 CCNB2O95067 398 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 CCR7P32248 378 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 TNFSF8P32971 234 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 CNR2P34972 360 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 IL12RB1P42701 662 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 OLR1P78380 273 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 ZNF45Q02386 682 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 SRSF11Q05519 484 aaKnown RBP12.26□□□□□ -0.45
VPS52-218ENST00000482399 C1DQ13901 141 aaKnown RBP12.26□□□□□ -0.45
VPS52-218ENST00000482399 RNASE12Q5GAN4 147 aaKnown RBP12.26□□□□□ -0.45
VPS52-218ENST00000482399 ATAD3CQ5T2N8 411 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 TRIQKQ629K1 86 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 VRK3Q8IV63 474 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 CHPFQ8IZ52 775 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 NXPE1Q8N323 547 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 GPR26Q8NDV2 337 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 RAB8BQ92930 207 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 NACC2Q96BF6 587 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 P2RY13Q9BPV8 354 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 SLC35A5Q9BS91 424 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 PDFQ9HBH1 243 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 MOV10Q9HCE1 1003 aaKnown RBP12.26□□□□□ -0.45
VPS52-218ENST00000482399 SERHLQ9NQF3 203 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 TRPS1Q9UHF7 1281 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 MOSPD1Q9UJG1 213 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 NDRG4Q9ULP0 352 aaKnown RBP12.26□□□□□ -0.45
VPS52-218ENST00000482399 CFL2Q9Y281 166 aa12.26□□□□□ -0.45
VPS52-218ENST00000482399 A0A0G2JN53 185 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 ANKRD34BA5PLL1 514 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 PSKH1P11801 424 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 NSG1P42857 185 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 NRIP1P48552 1158 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 HNRNPFP52597 415 aaKnown RBP12.25□□□□□ -0.45
VPS52-218ENST00000482399 UGT2B15P54855 530 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 CAV3P56539 151 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 SCARB2Q14108 478 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 AGAP6Q5VW22 663 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 CAPN13Q6MZZ7 669 aaPredicted RBP12.25□□□□□ -0.45
VPS52-218ENST00000482399 PNCKQ6P2M8 343 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 RNF130Q86XS8 419 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 LAX1Q8IWV1 398 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 CADM2Q8N3J6 435 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 AGAP4Q96P64 663 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 FYTTD1Q96QD9 318 aaKnown RBP12.25□□□□□ -0.45
VPS52-218ENST00000482399 HOXD1Q9GZZ0 328 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 SP140LQ9H930 580 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 PLOD3O60568 738 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 IGFBP1P08833 259 aaPredicted RBP12.25□□□□□ -0.45
VPS52-218ENST00000482399 ACRV1P26436 265 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 EIF4EBP2Q13542 120 aaPredicted RBP12.25□□□□□ -0.45
VPS52-218ENST00000482399 KIAA0040Q15053 153 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 UGT8Q16880 541 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 ERAP2Q6P179 960 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 ZNF852Q6ZMS4 543 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 USP30Q70CQ3 517 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 USP50Q70EL3 339 aaPredicted RBP12.25□□□□□ -0.45
VPS52-218ENST00000482399 CACUL1Q86Y37 369 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 DNAJC22Q8N4W6 341 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 ZNF366Q8N895 744 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 FBXO22Q8NEZ5 403 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 AUTS2Q8WXX7 1259 aa12.25□□□□□ -0.45
VPS52-218ENST00000482399 COQ3Q9NZJ6 369 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms