RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 TAC3Q9UHF0 121 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 ADGRE2Q9UHX3 823 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 FAF1Q9UNN5 650 aaPredicted RBP13.89□□□□□ -0.19
CHD3-211ENST00000481999 ELOVL7A1L3X0 281 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 C2CD4DB7Z1M9 353 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 G3V2T6 193 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 CPNE6O95741 557 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 ADH1BP00325 375 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 MYCLP1P12525 358 aaPredicted RBP13.89□□□□□ -0.19
CHD3-211ENST00000481999 PTPN6P29350 595 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 ACSL1P33121 698 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 TPRG1LQ5T0D9 272 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 TTC23Q5W5X9 447 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 TMEM92Q6UXU6 159 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 PDZD3Q86UT5 571 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 PLD3Q8IV08 490 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 FBXO30Q8TB52 745 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 PHF12Q96QT6 1004 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 TEX101Q9BY14 249 aa13.89□□□□□ -0.19
CHD3-211ENST00000481999 C17orf113A0A1B0GUU1 675 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 FEZF1A0PJY2 475 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 PIPSLA2A3N6 862 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 H0YIV9 168 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 NOL3O60936 208 aaKnown RBP13.88□□□□□ -0.19
CHD3-211ENST00000481999 ATE1O95260 518 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 DNTTP04053 509 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 LAMP1P11279 417 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 EEF1B2P24534 225 aaKnown RBP13.88□□□□□ -0.19
CHD3-211ENST00000481999 S100A3P33764 101 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 YAP1P46937 504 aaKnown RBP13.88□□□□□ -0.19
CHD3-211ENST00000481999 MC1RQ01726 317 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 ACSM2AQ08AH3 577 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 GRSF1Q12849 480 aaKnown RBP eCLIP13.88□□□□□ -0.19
CHD3-211ENST00000481999 MLF2Q15773 248 aaPredicted RBP13.88□□□□□ -0.19
CHD3-211ENST00000481999 NEDD8Q15843 81 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 ACSM2BQ68CK6 577 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 NUDT18Q6ZVK8 323 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 ARMCX6Q7L4S7 300 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 THAP5Q7Z6K1 395 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 SVOPLQ8N434 492 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 POP5Q969H6 163 aaKnown RBP13.88□□□□□ -0.19
CHD3-211ENST00000481999 C11orf24Q96F05 449 aaPredicted RBP13.88□□□□□ -0.19
CHD3-211ENST00000481999 ZNF514Q96K75 400 aaPredicted RBP13.88□□□□□ -0.19
CHD3-211ENST00000481999 SGPP1Q9BX95 441 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 SLC17A9Q9BYT1 436 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 DPEP2Q9H4A9 486 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 IMP3Q9NV31 184 aaKnown RBP13.88□□□□□ -0.19
CHD3-211ENST00000481999 INVSQ9Y283 1065 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 GMEB1Q9Y692 573 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 MTCH2Q9Y6C9 303 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 CXCR6O00574 342 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 RNGTTO60942 597 aaKnown RBP13.88□□□□□ -0.19
CHD3-211ENST00000481999 CST1P01037 141 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 JUNBP17275 347 aaPredicted RBP13.88□□□□□ -0.19
CHD3-211ENST00000481999 HOXB6P17509 224 aaKnown RBP13.88□□□□□ -0.19
CHD3-211ENST00000481999 TRIM23P36406 574 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 STT3AP46977 705 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 SGCGQ13326 291 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 C16orf72Q14CZ0 275 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 RUNDC3AQ59EK9 446 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 RBM48Q5RL73 367 aaKnown RBP13.88□□□□□ -0.19
CHD3-211ENST00000481999 BROXQ5VW32 411 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 METRNLQ641Q3 311 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 TTC23LQ6PF05 361 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 ENPP6Q6UWR7 440 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 C8orf59Q8N0T1 100 aaPredicted RBP13.88□□□□□ -0.19
CHD3-211ENST00000481999 LINC01555Q8NAE3 123 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 RPLP0P6Q8NHW5 317 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 WDR48Q8TAF3 677 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 FAM162AQ96A26 154 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 SLC47A1Q96FL8 570 aa13.88□□□□□ -0.19
CHD3-211ENST00000481999 CCDC177Q9NQR7 707 aaPredicted RBP13.88□□□□□ -0.19
CHD3-211ENST00000481999 PNMA8BQ9ULN7 279 aaPredicted RBP13.88□□□□□ -0.19
CHD3-211ENST00000481999 WDFY3Q8IZQ1 3526 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 TRIM64BA6NI03 449 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 CEACAM5P06731 702 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 ELK4P28324 431 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 PPP1R8Q12972 351 aaKnown RBP13.87□□□□□ -0.19
CHD3-211ENST00000481999 CLCA4Q14CN2 919 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 NKG7Q16617 165 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 ATG9BQ674R7 924 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 TMEM26Q6ZUK4 368 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 RD3Q7Z3Z2 195 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 MICU2Q8IYU8 434 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 SH3KBP1Q96B97 665 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 THAP11Q96EK4 314 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 C12orf66Q96MD2 445 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 MENTQ9BUN1 341 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 TOR3AQ9H497 397 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 KCNK12Q9HB15 430 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 FGF22Q9HCT0 170 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 USE1Q9NZ43 259 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 MAGED1Q9Y5V3 778 aaPredicted RBP13.87□□□□□ -0.19
CHD3-211ENST00000481999 TRBV5-3A0A0A0MS03 114 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 GNG14A0A1W2PPG7 69 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 RTCAO00442 366 aaKnown RBP13.87□□□□□ -0.19
CHD3-211ENST00000481999 GNGT2O14610 69 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 PLRG1O43660 514 aaKnown RBP13.87□□□□□ -0.19
CHD3-211ENST00000481999 UGDHO60701 494 aa13.87□□□□□ -0.19
CHD3-211ENST00000481999 PFDN1O60925 122 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms