RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 EBAG9O00559 213 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 MAGEB2O15479 319 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 POLR2DO15514 142 aaKnown RBP3.14□□□□□ -1.91
SMC6-208ENST00000481708 B4GALT2O60909 372 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 CSO75390 466 aaKnown RBP3.14□□□□□ -1.91
SMC6-208ENST00000481708 STAG3L3P0CL85 134 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 G6PDP11413 515 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 SLC6A12P48065 614 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 ENPEPQ07075 957 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 ALKBH6Q3KRA9 238 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 SLC9C1Q4G0N8 1177 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 FBXO48Q5FWF7 155 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 CFAP157Q5JU67 520 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 RABGAP1LQ5R372 815 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 PRAMEF19Q5SWL8 479 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 LCN10Q6JVE6 187 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 PMF1Q6P1K2 205 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 KIRREL2Q6UWL6 708 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 TAS2R42Q7RTR8 314 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 DGLUCYQ7Z3D6 616 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 GPR180Q86V85 440 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 SERINC5Q86VE9 423 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 EXOC3L1Q86VI1 746 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 FOXRED2Q8IWF2 684 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 PHF21BQ96EK2 531 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 SLC22A12Q96S37 553 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 SMC6Q96SB8 1091 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 PCDHB18PQ96TA0 734 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 NPY6RQ99463 290 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 ZBTB18Q99592 522 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 MMTAG2Q9BU76 263 aaKnown RBP3.14□□□□□ -1.91
SMC6-208ENST00000481708 MRPL37Q9BZE1 423 aaKnown RBP3.14□□□□□ -1.91
SMC6-208ENST00000481708 KLC2Q9H0B6 622 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 FAM114A2Q9NRY5 505 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 TMEM51Q9NW97 253 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 MGAT4CQ9UBM8 478 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 PSORS1C1Q9UIG5 152 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 ZDHHC9Q9Y397 364 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 WDR27A2RRH5 827 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 A6NNC1 897 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 F8W810 466 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 SMAD9O15198 467 aaKnown RBP3.14□□□□□ -1.91
SMC6-208ENST00000481708 MAPK13O15264 365 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 DCXO43602 365 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 DUSP11O75319 330 aaKnown RBP3.14□□□□□ -1.91
SMC6-208ENST00000481708 SLC25A27O95847 323 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 EGFP01133 1207 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 MMP1P03956 469 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 CYP1A1P04798 512 aaPredicted RBP3.14□□□□□ -1.91
SMC6-208ENST00000481708 HOXB5P09067 269 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 PKLRP30613 574 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 PRDX2P32119 198 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 VPS41P49754 854 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 RGS4P49798 205 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 MTTPP55157 894 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 TSTA3Q13630 321 aaPredicted RBP3.14□□□□□ -1.91
SMC6-208ENST00000481708 PDK4Q16654 411 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 UGP2Q16851 508 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 EIF2S3LQ2VIR3 472 aaKnown RBP3.14□□□□□ -1.91
SMC6-208ENST00000481708 SLC36A3Q495N2 470 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 TMPRSS6Q8IU80 811 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 MAPKAPK5Q8IW41 473 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 KLHL36Q8N4N3 616 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 BCORP1Q8N888 145 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 OR52N4Q8NGI2 321 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 SLC9A6Q92581 669 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 P2RX5Q93086 422 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 MSI2Q96DH6 328 aaKnown RBP3.14□□□□□ -1.91
SMC6-208ENST00000481708 MAGED4Q96JG8 741 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 WWTR1Q9GZV5 400 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 FN3KQ9H479 309 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 CD320Q9NPF0 282 aa3.14□□□□□ -1.91
SMC6-208ENST00000481708 MBLAC1A4D2B0 266 aaPredicted RBP3.13□□□□□ -1.91
SMC6-208ENST00000481708 MEIS2O14770 477 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 FLOT1O75955 427 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 GPANK1O95872 356 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 MATN1P21941 496 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 PAICSP22234 425 aaKnown RBP3.13□□□□□ -1.91
SMC6-208ENST00000481708 DUTP33316 252 aaKnown RBP3.13□□□□□ -1.91
SMC6-208ENST00000481708 SOX2P48431 317 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 LHX1P48742 406 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 NLRP11P59045 1033 aaKnown RBP3.13□□□□□ -1.91
SMC6-208ENST00000481708 CKAP5Q14008 2032 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 SHHQ15465 462 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 ALX1Q15699 326 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 ADPRMQ3LIE5 342 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 FUT11Q495W5 492 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 ASPHD1Q5U4P2 390 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 FAM166AQ6J272 317 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 TRILQ7L0X0 811 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 C1orf87Q8N0U7 546 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 PARP16Q8N5Y8 322 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 OR4A16Q8NH70 328 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 ZNF503Q96F45 646 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 RAB40CQ96S21 281 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 DCLRE1CQ96SD1 692 aaKnown RBP3.13□□□□□ -1.91
SMC6-208ENST00000481708 EGFL8Q99944 293 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 CAPS2Q9BXY5 557 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 SFXN1Q9H9B4 322 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 ANKRD10Q9NXR5 420 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms