RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 UBE3DQ7Z6J8 389 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 ASPGQ86U10 573 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 ALYREFQ86V81 257 aaKnown RBP8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 CARFQ8N187 725 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 AMER3Q8N944 861 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 KCT2Q8NC54 265 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 WDR48Q8TAF3 677 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 NT5CQ8TCD5 201 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 CCT6BQ92526 530 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 UBE2E3Q969T4 207 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 PMEPA1Q969W9 287 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 REPS1Q96D71 796 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 TM4SF19Q96DZ7 209 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 C11orf24Q96F05 449 aaPredicted RBP8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 TCTN2Q96GX1 697 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 APIPQ96GX9 242 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 FAR2Q96K12 515 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 C10orf90Q96M02 699 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 ZNF285Q96NJ3 590 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 F2RL3Q96RI0 385 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 SORBS1Q9BX66 1292 aaKnown RBP8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 MRPL1Q9BYD6 325 aaKnown RBP8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 SLC6A16Q9GZN6 736 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 CHRNA10Q9GZZ6 450 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 NSRP1Q9H0G5 558 aaKnown RBP8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 OR51B5Q9H339 312 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 AKTIPQ9H8T0 292 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 STARD5Q9NSY2 213 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 VTI1BQ9UEU0 232 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 SLC12A4Q9UP95 1085 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 SDK2Q58EX2 2172 aa8.55□□□□□ -1.04
NUDCD3-208ENST00000480209 LRIT2A6NDA9 550 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 E9PBE3 544 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 NPIPB8E9PQR5 432 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 SLCO1B7G3V0H7 640 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 RTCAO00442 366 aaKnown RBP8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 SLC30A4O14863 429 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 TOX3O15405 576 aaPredicted RBP8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 KLHL41O60662 606 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 CLEC3AO75596 197 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 RSL1D1O76021 490 aaKnown RBP8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 KLHL18O94889 574 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 TIAF1O95411 115 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 CHEK2O96017 543 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 SERPIND1P05546 499 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 CD1EP15812 388 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 PRPH2P23942 346 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 CCKBRP32239 447 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 GCGRP47871 477 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 SIM1P81133 766 aaPredicted RBP8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 RELAQ04206 551 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 ILKQ13418 452 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 KIAA0040Q15053 153 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 NR6A1Q15406 480 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 HIST2H2ACQ16777 129 aaPredicted RBP8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 IMPG1Q17R60 797 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 PRTGQ2VWP7 1150 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 ADPRMQ3LIE5 342 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 GALNTL6Q49A17 601 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 RFTN2Q52LD8 501 aaPredicted RBP8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 TOR1AIP1Q5JTV8 583 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 HES3Q5TGS1 186 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 PRAMEF17Q5VTA0 474 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 KHDRBS2Q5VWX1 349 aaKnown RBP8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 HIST2H2AA3Q6FI13 130 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 RBM44Q6ZP01 1051 aaKnown RBP8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 LARP4Q71RC2 724 aaKnown RBP eCLIP8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 CPLX4Q7Z7G2 160 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 ZFAND4Q86XD8 727 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 KMT5CQ86Y97 462 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 MARCH9Q86YJ5 346 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 MCATQ8IVS2 390 aaKnown RBP8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 HOMEZQ8IX15 550 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 CHCHD4Q8N4Q1 142 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 AFAP1L2Q8N4X5 818 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 C1orf52Q8N6N3 182 aaKnown RBP8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 CSNK1A1LQ8N752 337 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 BMPERQ8N8U9 685 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 OR1L3Q8NH93 324 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 ZCCHC10Q8TBK6 192 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 STON2Q8WXE9 905 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 TUBGCP3Q96CW5 907 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 ZNF501Q96CX3 271 aaPredicted RBP8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 FCRL1Q96LA6 429 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 TEFMQ96QE5 360 aaKnown RBP8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 DPYSL5Q9BPU6 564 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 C1orf50Q9BV19 199 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 EBPLQ9BY08 206 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 BRF2Q9HAW0 419 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 APMAPQ9HDC9 416 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 PDE7BQ9NP56 450 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 OCIAD1Q9NX40 245 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 PPT2Q9UMR5 302 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 RUVBL1Q9Y265 456 aaKnown RBP8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 POLR3HQ9Y535 204 aaPredicted RBP8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 PCDHGA1Q9Y5H4 931 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 CROCCQ5TZA2 2017 aa8.54□□□□□ -1.04
NUDCD3-208ENST00000480209 WDFY3Q8IZQ1 3526 aa8.53□□□□□ -1.04
NUDCD3-208ENST00000480209 FITM1A5D6W6 292 aa8.53□□□□□ -1.04
NUDCD3-208ENST00000480209 ANKDD1BA6NHY2 528 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms