RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 DRC3Q9H069 523 aa18.78■□□□□ 0.6
LIME1-205ENST00000480139 CHST8Q9H2A9 424 aa18.78■□□□□ 0.6
LIME1-205ENST00000480139 AKIRIN1Q9H9L7 192 aaPredicted RBP18.78■□□□□ 0.6
LIME1-205ENST00000480139 SEMA4BQ9NPR2 832 aaPredicted RBP18.78■□□□□ 0.6
LIME1-205ENST00000480139 ADGRE2Q9UHX3 823 aa18.78■□□□□ 0.6
LIME1-205ENST00000480139 KCND3Q9UK17 655 aa18.78■□□□□ 0.6
LIME1-205ENST00000480139 CROTQ9UKG9 612 aa18.78■□□□□ 0.6
LIME1-205ENST00000480139 PCDHGA6Q9Y5G7 932 aa18.78■□□□□ 0.6
LIME1-205ENST00000480139 PCDHGA11Q9Y5H2 935 aa18.78■□□□□ 0.6
LIME1-205ENST00000480139 SEC16AO15027 2179 aa18.77■□□□□ 0.6
LIME1-205ENST00000480139 URADA6NGE7 173 aa18.77■□□□□ 0.6
LIME1-205ENST00000480139 CAPN1P07384 714 aa18.77■□□□□ 0.6
LIME1-205ENST00000480139 TCN2P20062 427 aa18.77■□□□□ 0.6
LIME1-205ENST00000480139 DLSTP36957 453 aa18.77■□□□□ 0.6
LIME1-205ENST00000480139 ETV4P43268 484 aa18.77■□□□□ 0.6
LIME1-205ENST00000480139 UCNP55089 124 aa18.77■□□□□ 0.6
LIME1-205ENST00000480139 CDH13P55290 713 aa18.77■□□□□ 0.6
LIME1-205ENST00000480139 ASPHQ12797 758 aa18.77■□□□□ 0.6
LIME1-205ENST00000480139 HYAL2Q12891 473 aa18.77■□□□□ 0.6
LIME1-205ENST00000480139 LCP2Q13094 533 aa18.77■□□□□ 0.6
LIME1-205ENST00000480139 C1orf189Q5VU69 101 aa18.77■□□□□ 0.6
LIME1-205ENST00000480139 BROXQ5VW32 411 aa18.77■□□□□ 0.6
LIME1-205ENST00000480139 NIPAL1Q6NVV3 410 aa18.77■□□□□ 0.6
LIME1-205ENST00000480139 FAM199XQ6PEV8 388 aaPredicted RBP18.77■□□□□ 0.6
LIME1-205ENST00000480139 FAM198BQ6UWH4 519 aa18.77■□□□□ 0.6
LIME1-205ENST00000480139 VN1R5Q7Z5H4 357 aa18.77■□□□□ 0.6
LIME1-205ENST00000480139 AFAP1L2Q8N4X5 818 aa18.77■□□□□ 0.6
LIME1-205ENST00000480139 KCT2Q8NC54 265 aa18.77■□□□□ 0.6
LIME1-205ENST00000480139 OR7G3Q8NG95 312 aa18.77■□□□□ 0.6
LIME1-205ENST00000480139 FKBP10Q96AY3 582 aa18.77■□□□□ 0.6
LIME1-205ENST00000480139 MOCOSQ96EN8 888 aa18.77■□□□□ 0.6
LIME1-205ENST00000480139 ZNF382Q96SR6 550 aa18.77■□□□□ 0.6
LIME1-205ENST00000480139 GSTO2Q9H4Y5 243 aa18.77■□□□□ 0.6
LIME1-205ENST00000480139 GPN2Q9H9Y4 310 aaPredicted RBP18.77■□□□□ 0.6
LIME1-205ENST00000480139 NDOR1Q9UHB4 597 aa18.77■□□□□ 0.6
LIME1-205ENST00000480139 SRRM3A6NNA2 597 aaPredicted RBP18.76■□□□□ 0.59
LIME1-205ENST00000480139 C9J4A7 227 aa18.76■□□□□ 0.59
LIME1-205ENST00000480139 FOXS1O43638 330 aa18.76■□□□□ 0.59
LIME1-205ENST00000480139 ZWINTO95229 277 aa18.76■□□□□ 0.59
LIME1-205ENST00000480139 NSA2O95478 260 aaKnown RBP18.76■□□□□ 0.59
LIME1-205ENST00000480139 STATHP02808 62 aa18.76■□□□□ 0.59
LIME1-205ENST00000480139 CD63P08962 238 aa18.76■□□□□ 0.59
LIME1-205ENST00000480139 LIFP15018 202 aa18.76■□□□□ 0.59
LIME1-205ENST00000480139 PIK3CBP42338 1070 aa18.76■□□□□ 0.59
LIME1-205ENST00000480139 STXBP1P61764 594 aaKnown RBP18.76■□□□□ 0.59
LIME1-205ENST00000480139 CYP4F2P78329 520 aa18.76■□□□□ 0.59
LIME1-205ENST00000480139 DNASE1L3Q13609 305 aa18.76■□□□□ 0.59
LIME1-205ENST00000480139 HERC3Q15034 1050 aa18.76■□□□□ 0.59
LIME1-205ENST00000480139 RBBP7Q16576 425 aa18.76■□□□□ 0.59
LIME1-205ENST00000480139 ADPRMQ3LIE5 342 aa18.76■□□□□ 0.59
LIME1-205ENST00000480139 AGBL2Q5U5Z8 902 aa18.76■□□□□ 0.59
LIME1-205ENST00000480139 LCN10Q6JVE6 187 aa18.76■□□□□ 0.59
LIME1-205ENST00000480139 FRMD7Q6ZUT3 714 aa18.76■□□□□ 0.59
LIME1-205ENST00000480139 RPS27LQ71UM5 84 aaKnown RBP18.76■□□□□ 0.59
LIME1-205ENST00000480139 ABHD13Q7L211 337 aa18.76■□□□□ 0.59
LIME1-205ENST00000480139 MYLK4Q86YV6 388 aaPredicted RBP18.76■□□□□ 0.59
LIME1-205ENST00000480139 C10orf107Q8IVU9 208 aa18.76■□□□□ 0.59
LIME1-205ENST00000480139 MACROD1Q9BQ69 325 aa18.76■□□□□ 0.59
LIME1-205ENST00000480139 ZNF304Q9HCX3 659 aa18.76■□□□□ 0.59
LIME1-205ENST00000480139 TRPS1Q9UHF7 1281 aa18.76■□□□□ 0.59
LIME1-205ENST00000480139 MRPS2Q9Y399 296 aaKnown RBP18.76■□□□□ 0.59
LIME1-205ENST00000480139 RNF11Q9Y3C5 154 aa18.76■□□□□ 0.59
LIME1-205ENST00000480139 USP24Q9UPU5 2620 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 ZFHX4Q86UP3 3567 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 UQCRHLA0A096LP55 91 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 LRIT2A6NDA9 550 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 H0YIG0 161 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 H3BQF6 201 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 TRIM13O60858 407 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 TBX6O95947 436 aaPredicted RBP18.75■□□□□ 0.59
LIME1-205ENST00000480139 ALBP02768 609 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 SERPIND1P05546 499 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 UQCRHP07919 91 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 ARL1P40616 181 aaPredicted RBP18.75■□□□□ 0.59
LIME1-205ENST00000480139 AVPR1BP47901 424 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 SLC18A1P54219 525 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 NAGLUP54802 743 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 PKNOX1P55347 436 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 SKP1P63208 163 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 DSG2Q14126 1118 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 NCF4Q15080 339 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 MRPL14Q6P1L8 145 aaKnown RBP18.75■□□□□ 0.59
LIME1-205ENST00000480139 COX15Q7KZN9 410 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 MILR1Q7Z6M3 343 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 VASH2Q86V25 355 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 CCNYL1Q8N7R7 359 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 OR4F6Q8NGB9 312 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 TRPC4APQ8TEL6 797 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 ZNF473Q8WTR7 871 aaKnown RBP18.75■□□□□ 0.59
LIME1-205ENST00000480139 SLC45A3Q96JT2 553 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 CDK15Q96Q40 435 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 SH3GL2Q99962 352 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 SLC26A1Q9H2B4 701 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 ANKHQ9HCJ1 492 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 SLC22A11Q9NSA0 550 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 PSD3Q9NYI0 1048 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 IFT80Q9P2H3 777 aaPredicted RBP18.75■□□□□ 0.59
LIME1-205ENST00000480139 PPT2Q9UMR5 302 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 CELSR3Q9NYQ7 3312 aa18.75■□□□□ 0.59
LIME1-205ENST00000480139 PPP6CO00743 305 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms