RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 FCGR2CP31995 323 aa1.98□□□□□ -2.09
HPS3-205ENST00000478525 MEOX2P50222 304 aa1.98□□□□□ -2.09
HPS3-205ENST00000478525 SNAPC1Q16533 368 aa1.98□□□□□ -2.09
HPS3-205ENST00000478525 PRSS55Q6UWB4 352 aaPredicted RBP1.98□□□□□ -2.09
HPS3-205ENST00000478525 DND1Q8IYX4 353 aaKnown RBP1.98□□□□□ -2.09
HPS3-205ENST00000478525 CFAP61Q8NHU2 1237 aa1.98□□□□□ -2.09
HPS3-205ENST00000478525 ATL1Q8WXF7 558 aa1.98□□□□□ -2.09
HPS3-205ENST00000478525 FAM104AQ969W3 186 aa1.98□□□□□ -2.09
HPS3-205ENST00000478525 WDR41Q9HAD4 459 aa1.98□□□□□ -2.09
HPS3-205ENST00000478525 GSN-AS1Q9NRJ2 163 aa1.98□□□□□ -2.09
HPS3-205ENST00000478525 DEPPQ9NTK1 212 aa1.98□□□□□ -2.09
HPS3-205ENST00000478525 CRNNQ9UBG3 495 aaPredicted RBP1.98□□□□□ -2.09
HPS3-205ENST00000478525 RPS6KB2Q9UBS0 482 aa1.98□□□□□ -2.09
HPS3-205ENST00000478525 MRPL11Q9Y3B7 192 aaKnown RBP1.98□□□□□ -2.09
HPS3-205ENST00000478525 NKX6-3A6NJ46 265 aa1.97□□□□□ -2.09
HPS3-205ENST00000478525 AGAP14A8MT82 685 aa1.97□□□□□ -2.09
HPS3-205ENST00000478525 INPP4BO15327 924 aa1.97□□□□□ -2.09
HPS3-205ENST00000478525 IPO8O15397 1037 aaKnown RBP1.97□□□□□ -2.09
HPS3-205ENST00000478525 TSC22D2O75157 780 aa1.97□□□□□ -2.09
HPS3-205ENST00000478525 RPS6KA5O75582 802 aa1.97□□□□□ -2.09
HPS3-205ENST00000478525 PIGRP01833 764 aa1.97□□□□□ -2.09
HPS3-205ENST00000478525 CSN3P07498 182 aa1.97□□□□□ -2.09
HPS3-205ENST00000478525 LINGO3P0C6S8 592 aa1.97□□□□□ -2.09
HPS3-205ENST00000478525 ACHEP22303 614 aa1.97□□□□□ -2.09
HPS3-205ENST00000478525 GCKRQ14397 625 aa1.97□□□□□ -2.09
HPS3-205ENST00000478525 PCLAFQ15004 111 aa1.97□□□□□ -2.09
HPS3-205ENST00000478525 CCL14Q16627 93 aa1.97□□□□□ -2.09
HPS3-205ENST00000478525 C15orf59Q2T9L4 293 aaPredicted RBP1.97□□□□□ -2.09
HPS3-205ENST00000478525 CBWD6Q4V339 395 aa1.97□□□□□ -2.09
HPS3-205ENST00000478525 CBWD3Q5JTY5 395 aa1.97□□□□□ -2.09
HPS3-205ENST00000478525 MUC21Q5SSG8 566 aa1.97□□□□□ -2.09
HPS3-205ENST00000478525 PLEKHS1Q5SXH7 462 aa1.97□□□□□ -2.09
HPS3-205ENST00000478525 CELF3Q5SZQ8 465 aaKnown RBP1.97□□□□□ -2.09
HPS3-205ENST00000478525 MMS22LQ6ZRQ5 1243 aa1.97□□□□□ -2.09
HPS3-205ENST00000478525 CCDC60Q8IWA6 550 aaPredicted RBP1.97□□□□□ -2.09
HPS3-205ENST00000478525 SIGLEC12Q96PQ1 595 aa1.97□□□□□ -2.09
HPS3-205ENST00000478525 SDCBP2Q9H190 292 aa1.97□□□□□ -2.09
HPS3-205ENST00000478525 GOLPH3LQ9H4A5 285 aa1.97□□□□□ -2.09
HPS3-205ENST00000478525 CPSF3Q9UKF6 684 aaKnown RBP1.97□□□□□ -2.09
HPS3-205ENST00000478525 A8MU76 341 aa1.96□□□□□ -2.1
HPS3-205ENST00000478525 A8MVM7 634 aa1.96□□□□□ -2.1
HPS3-205ENST00000478525 TRIM77I1YAP6 450 aa1.96□□□□□ -2.1
HPS3-205ENST00000478525 J3KRW8 73 aa1.96□□□□□ -2.1
HPS3-205ENST00000478525 SLC33A1O00400 549 aaPredicted RBP1.96□□□□□ -2.1
HPS3-205ENST00000478525 AP3D1O14617 1153 aa1.96□□□□□ -2.1
HPS3-205ENST00000478525 PTGESO14684 152 aa1.96□□□□□ -2.1
HPS3-205ENST00000478525 SIGLEC5O15389 551 aa1.96□□□□□ -2.1
HPS3-205ENST00000478525 FOXH1O75593 365 aa1.96□□□□□ -2.1
HPS3-205ENST00000478525 ALOX5P09917 674 aa1.96□□□□□ -2.1
HPS3-205ENST00000478525 SAGP10523 405 aaPredicted RBP1.96□□□□□ -2.1
HPS3-205ENST00000478525 ODC1P11926 461 aa1.96□□□□□ -2.1
HPS3-205ENST00000478525 F3P13726 295 aa1.96□□□□□ -2.1
HPS3-205ENST00000478525 CD59P13987 128 aa1.96□□□□□ -2.1
HPS3-205ENST00000478525 CRYBA2P53672 197 aa1.96□□□□□ -2.1
HPS3-205ENST00000478525 ARF3P61204 181 aaPredicted RBP1.96□□□□□ -2.1
HPS3-205ENST00000478525 DCAF7P61962 342 aa1.96□□□□□ -2.1
HPS3-205ENST00000478525 BTG1P62324 171 aa1.96□□□□□ -2.1
HPS3-205ENST00000478525 ARF1P84077 181 aaKnown RBP1.96□□□□□ -2.1
HPS3-205ENST00000478525 VWA2Q5GFL6 755 aa1.96□□□□□ -2.1
HPS3-205ENST00000478525 TEX35Q5T0J7 233 aa1.96□□□□□ -2.1
HPS3-205ENST00000478525 ENTHD1Q8IYW4 607 aa1.96□□□□□ -2.1
HPS3-205ENST00000478525 RYBPQ8N488 228 aaPredicted RBP1.96□□□□□ -2.1
HPS3-205ENST00000478525 PROX1Q92786 737 aa1.96□□□□□ -2.1
HPS3-205ENST00000478525 NXPE2Q96DL1 559 aa1.96□□□□□ -2.1
HPS3-205ENST00000478525 LURAP1Q96LR2 239 aa1.96□□□□□ -2.1
HPS3-205ENST00000478525 MCCC1Q96RQ3 725 aaPredicted RBP1.96□□□□□ -2.1
HPS3-205ENST00000478525 NDNQ99608 321 aa1.96□□□□□ -2.1
HPS3-205ENST00000478525 PAPOLGQ9BWT3 736 aaKnown RBP1.96□□□□□ -2.1
HPS3-205ENST00000478525 HES7Q9BYE0 225 aa1.96□□□□□ -2.1
HPS3-205ENST00000478525 KCNMB3Q9NPA1 279 aa1.96□□□□□ -2.1
HPS3-205ENST00000478525 POLKQ9UBT6 870 aa1.96□□□□□ -2.1
HPS3-205ENST00000478525 ITGA11Q9UKX5 1188 aa1.96□□□□□ -2.1
HPS3-205ENST00000478525 TRAV24A0A0B4J272 114 aa1.95□□□□□ -2.1
HPS3-205ENST00000478525 TRBV5-4A0A0C4DH59 114 aa1.95□□□□□ -2.1
HPS3-205ENST00000478525 ZSCAN5CA6NGD5 496 aaPredicted RBP1.95□□□□□ -2.1
HPS3-205ENST00000478525 F5H0A9 414 aaPredicted RBP1.95□□□□□ -2.1
HPS3-205ENST00000478525 LYPD3O95274 346 aa1.95□□□□□ -2.1
HPS3-205ENST00000478525 GSRP00390 522 aa1.95□□□□□ -2.1
HPS3-205ENST00000478525 GCH1P30793 250 aa1.95□□□□□ -2.1
HPS3-205ENST00000478525 STAT2P52630 851 aa1.95□□□□□ -2.1
HPS3-205ENST00000478525 DUSP28Q4G0W2 176 aa1.95□□□□□ -2.1
HPS3-205ENST00000478525 ZNF544Q6NX49 715 aa1.95□□□□□ -2.1
HPS3-205ENST00000478525 SZRD1Q7Z422 152 aa1.95□□□□□ -2.1
HPS3-205ENST00000478525 LINC00346Q8IVM7 164 aa1.95□□□□□ -2.1
HPS3-205ENST00000478525 UBQLNLQ8IYU4 475 aa1.95□□□□□ -2.1
HPS3-205ENST00000478525 MINDY1Q8N5J2 469 aa1.95□□□□□ -2.1
HPS3-205ENST00000478525 OR1B1Q8NGR6 318 aa1.95□□□□□ -2.1
HPS3-205ENST00000478525 ZNF564Q8TBZ8 553 aaPredicted RBP1.95□□□□□ -2.1
HPS3-205ENST00000478525 IL12RB2Q99665 862 aa1.95□□□□□ -2.1
HPS3-205ENST00000478525 CPNE1Q99829 537 aa1.95□□□□□ -2.1
HPS3-205ENST00000478525 ACTL8Q9H568 366 aa1.95□□□□□ -2.1
HPS3-205ENST00000478525 SLC24A2Q9UI40 661 aa1.95□□□□□ -2.1
HPS3-205ENST00000478525 PANO1I0J062 215 aa1.94□□□□□ -2.1
HPS3-205ENST00000478525 RHBDL1O75783 438 aa1.94□□□□□ -2.1
HPS3-205ENST00000478525 SERPING1P05155 500 aa1.94□□□□□ -2.1
HPS3-205ENST00000478525 CD1EP15812 388 aa1.94□□□□□ -2.1
HPS3-205ENST00000478525 CYP11B2P19099 503 aa1.94□□□□□ -2.1
HPS3-205ENST00000478525 MDKP21741 143 aaPredicted RBP1.94□□□□□ -2.1
HPS3-205ENST00000478525 SFTPDP35247 375 aa1.94□□□□□ -2.1
HPS3-205ENST00000478525 SPRP35270 261 aaPredicted RBP1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms