RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 RBP1P09455 135 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 OR56A5P0C7T3 313 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 SPNP16150 400 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 ZNF16P17020 682 aaPredicted RBP4.55□□□□□ -1.68
PTCD3-212ENST00000477520 MYL12AP19105 171 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 ATP6V1B2P21281 511 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 PSMB9P28065 219 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 SHMT2P34897 504 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 SPAM1P38567 509 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 GCLMP48507 274 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 VEGFCP49767 419 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 MEOX2P50222 304 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 SCNN1GP51170 649 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 CLCN5P51795 746 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 CLCNKAP51800 687 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 GPR143P51810 404 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 TKTL1P51854 596 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 ARHGDIBP52566 201 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 BCAT1P54687 386 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 CDH8P55286 799 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 RRAS2P62070 204 aaPredicted RBP4.55□□□□□ -1.68
PTCD3-212ENST00000477520 ZNF91Q05481 1191 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 CD47Q08722 323 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 DBPQ10586 325 aaPredicted RBP4.55□□□□□ -1.68
PTCD3-212ENST00000477520 CRHR2Q13324 411 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 PEX6Q13608 980 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 BMPR2Q13873 1038 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 TOMM20Q15388 145 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 GPR19Q15760 415 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 FSCN1Q16658 493 aaKnown RBP4.55□□□□□ -1.68
PTCD3-212ENST00000477520 KIF19Q2TAC6 998 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 QRICH1Q2TAL8 776 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 HKDC1Q2TB90 917 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 GTDC1Q4AE62 458 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 LBHQ53QV2 105 aaPredicted RBP4.55□□□□□ -1.68
PTCD3-212ENST00000477520 Q5BKY6 102 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 ARL13AQ5H913 290 aaPredicted RBP4.55□□□□□ -1.68
PTCD3-212ENST00000477520 PHF19Q5T6S3 580 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 LCN1P1Q5VSP4 162 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 OR7E24Q6IFN5 339 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 CAPN13Q6MZZ7 669 aaPredicted RBP4.55□□□□□ -1.68
PTCD3-212ENST00000477520 CES5AQ6NT32 575 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 XRRA1Q6P2D8 792 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 C17orf99Q6UX52 265 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 ANGPTL8Q6UXH0 198 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 HSDL2Q6YN16 418 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 TMPRSS11AQ6ZMR5 421 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 ARHGAP36Q6ZRI8 547 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 SLC46A3Q7Z3Q1 461 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 SPATA19Q7Z5L4 167 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 NRARPQ7Z6K4 114 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 RNF180Q86T96 592 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 DDX53Q86TM3 631 aaKnown RBP4.55□□□□□ -1.68
PTCD3-212ENST00000477520 RFX6Q8HWS3 928 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 SPATA2LQ8IUW3 424 aaPredicted RBP4.55□□□□□ -1.68
PTCD3-212ENST00000477520 PHC2Q8IXK0 858 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 RIMKLAQ8IXN7 391 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 RAVER1Q8IY67 606 aaKnown RBP4.55□□□□□ -1.68
PTCD3-212ENST00000477520 CCDC36Q8IYA8 594 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 ZZZ3Q8IYH5 903 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 DCP1BQ8IZD4 617 aaKnown RBP4.55□□□□□ -1.68
PTCD3-212ENST00000477520 OR8H2Q8N162 312 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 Q8N1Y9 231 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 STPG2Q8N412 459 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 LRRC71Q8N4P6 559 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 PCDH20Q8N6Y1 951 aaKnown RBP4.55□□□□□ -1.68
PTCD3-212ENST00000477520 LRRC17Q8N6Y2 441 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 RNF148Q8N7C7 305 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 PLD5Q8N7P1 536 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 CELF2-AS1Q8N7Q2 184 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 ZNF366Q8N895 744 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 YIPF7Q8N8F6 280 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 TTC29Q8NA56 475 aaPredicted RBP4.55□□□□□ -1.68
PTCD3-212ENST00000477520 KCTD6Q8NC69 237 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 SRFBP1Q8NEF9 429 aaKnown RBP4.55□□□□□ -1.68
PTCD3-212ENST00000477520 OR6S1Q8NH40 331 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 CDC26Q8NHZ8 85 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 WDR36Q8NI36 951 aaKnown RBP4.55□□□□□ -1.68
PTCD3-212ENST00000477520 SPPL2BQ8TCT7 592 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 STYXQ8WUJ0 223 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 BTN2A2Q8WVV5 523 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 CRYGNQ8WXF5 182 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 TCEAL3Q969E4 200 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 MARC2Q969Z3 335 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 PHF21AQ96BD5 680 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 PTERQ96BW5 349 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 BIRC7Q96CA5 298 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 LRRC58Q96CX6 371 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 SLC47A1Q96FL8 570 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 PDLIM5Q96HC4 596 aaKnown RBP4.55□□□□□ -1.68
PTCD3-212ENST00000477520 FOPNLQ96NB1 174 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 FIZ1Q96SL8 496 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 TBCBQ99426 244 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 RBBP8Q99708 897 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 HSD17B14Q9BPX1 270 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 MRPL57Q9BQC6 102 aaKnown RBP4.55□□□□□ -1.68
PTCD3-212ENST00000477520 EIF2AK1Q9BQI3 630 aaKnown RBP4.55□□□□□ -1.68
PTCD3-212ENST00000477520 ZNF251Q9BRH9 671 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 TTPALQ9BTX7 342 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 ACE2Q9BYF1 805 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms