RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 CWC25Q9NXE8 425 aaPredicted RBP5.21□□□□□ -1.58
SMC5-203ENST00000475540 SLC12A6Q9UHW9 1150 aa5.21□□□□□ -1.58
SMC5-203ENST00000475540 FBXL4Q9UKA2 621 aa5.21□□□□□ -1.58
SMC5-203ENST00000475540 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.21□□□□□ -1.58
SMC5-203ENST00000475540 SNX7Q9UNH6 387 aa5.21□□□□□ -1.58
SMC5-203ENST00000475540 IQCMA0A1B0GVH7 501 aa5.2□□□□□ -1.58
SMC5-203ENST00000475540 PENKP01210 267 aaPredicted RBP5.2□□□□□ -1.58
SMC5-203ENST00000475540 YES1P07947 543 aa5.2□□□□□ -1.58
SMC5-203ENST00000475540 AOC1P19801 751 aa5.2□□□□□ -1.58
SMC5-203ENST00000475540 MUTP22033 750 aa5.2□□□□□ -1.58
SMC5-203ENST00000475540 NOVP48745 357 aa5.2□□□□□ -1.58
SMC5-203ENST00000475540 OR1D5P58170 312 aa5.2□□□□□ -1.58
SMC5-203ENST00000475540 LRRC73Q5JTD7 316 aa5.2□□□□□ -1.58
SMC5-203ENST00000475540 SUSD4Q5VX71 490 aa5.2□□□□□ -1.58
SMC5-203ENST00000475540 CDHR3Q6ZTQ4 885 aa5.2□□□□□ -1.58
SMC5-203ENST00000475540 ANKRD33Q7Z3H0 272 aa5.2□□□□□ -1.58
SMC5-203ENST00000475540 PRSS35Q8N3Z0 413 aa5.2□□□□□ -1.58
SMC5-203ENST00000475540 ZNF713Q8N859 430 aaPredicted RBP5.2□□□□□ -1.58
SMC5-203ENST00000475540 CHPT1Q8WUD6 406 aa5.2□□□□□ -1.58
SMC5-203ENST00000475540 NSMAFQ92636 917 aa5.2□□□□□ -1.58
SMC5-203ENST00000475540 NXPE2Q96DL1 559 aa5.2□□□□□ -1.58
SMC5-203ENST00000475540 PDLIM5Q96HC4 596 aaKnown RBP5.2□□□□□ -1.58
SMC5-203ENST00000475540 DNAI2Q9GZS0 605 aa5.2□□□□□ -1.58
SMC5-203ENST00000475540 PARLQ9H300 379 aa5.2□□□□□ -1.58
SMC5-203ENST00000475540 ST6GALNAC4Q9H4F1 302 aa5.2□□□□□ -1.58
SMC5-203ENST00000475540 CTSZQ9UBR2 303 aa5.2□□□□□ -1.58
SMC5-203ENST00000475540 PILRBQ9UKJ0 227 aa5.2□□□□□ -1.58
SMC5-203ENST00000475540 SNX5Q9Y5X3 404 aa5.2□□□□□ -1.58
SMC5-203ENST00000475540 IGHV4-30-2A0A087WSY4 118 aa5.19□□□□□ -1.58
SMC5-203ENST00000475540 SAP30O75446 220 aa5.19□□□□□ -1.58
SMC5-203ENST00000475540 SCG2P13521 617 aa5.19□□□□□ -1.58
SMC5-203ENST00000475540 RAD23AP54725 363 aa5.19□□□□□ -1.58
SMC5-203ENST00000475540 MFAP3P55082 362 aa5.19□□□□□ -1.58
SMC5-203ENST00000475540 ZNF273Q14593 569 aa5.19□□□□□ -1.58
SMC5-203ENST00000475540 FAM106AQ4KMX7 169 aa5.19□□□□□ -1.58
SMC5-203ENST00000475540 C6orf136Q5SQH8 315 aa5.19□□□□□ -1.58
SMC5-203ENST00000475540 ZNF774Q6NX45 483 aa5.19□□□□□ -1.58
SMC5-203ENST00000475540 FAM131BQ86XD5 332 aa5.19□□□□□ -1.58
SMC5-203ENST00000475540 FAM219AQ8IW50 185 aa5.19□□□□□ -1.58
SMC5-203ENST00000475540 ABHD12Q8N2K0 398 aa5.19□□□□□ -1.58
SMC5-203ENST00000475540 IQUBQ8NA54 791 aa5.19□□□□□ -1.58
SMC5-203ENST00000475540 C17orf47Q8NEP4 570 aa5.19□□□□□ -1.58
SMC5-203ENST00000475540 P2RX5Q93086 422 aa5.19□□□□□ -1.58
SMC5-203ENST00000475540 EDEM3Q9BZQ6 932 aa5.19□□□□□ -1.58
SMC5-203ENST00000475540 TUBB1Q9H4B7 451 aa5.19□□□□□ -1.58
SMC5-203ENST00000475540 PFDN4Q9NQP4 134 aa5.19□□□□□ -1.58
SMC5-203ENST00000475540 NLGN3Q9NZ94 848 aa5.19□□□□□ -1.58
SMC5-203ENST00000475540 SPATA31D1Q6ZQQ2 1576 aa5.18□□□□□ -1.58
SMC5-203ENST00000475540 A0A087WZ39 114 aa5.18□□□□□ -1.58
SMC5-203ENST00000475540 A8MVM7 634 aa5.18□□□□□ -1.58
SMC5-203ENST00000475540 F8VVB4 439 aa5.18□□□□□ -1.58
SMC5-203ENST00000475540 F8VWA3 439 aa5.18□□□□□ -1.58
SMC5-203ENST00000475540 CD59P13987 128 aa5.18□□□□□ -1.58
SMC5-203ENST00000475540 TCF4P15884 667 aa5.18□□□□□ -1.58
SMC5-203ENST00000475540 ERVK-16P61578 105 aa5.18□□□□□ -1.58
SMC5-203ENST00000475540 UGCGQ16739 394 aa5.18□□□□□ -1.58
SMC5-203ENST00000475540 C1orf141Q5JVX7 400 aa5.18□□□□□ -1.58
SMC5-203ENST00000475540 SLC10A5Q5PT55 438 aa5.18□□□□□ -1.58
SMC5-203ENST00000475540 PIGWQ7Z7B1 504 aa5.18□□□□□ -1.58
SMC5-203ENST00000475540 IQCA1Q86XH1 822 aa5.18□□□□□ -1.58
SMC5-203ENST00000475540 CCAR2Q8N163 923 aaKnown RBP5.18□□□□□ -1.58
SMC5-203ENST00000475540 MSANTD4Q8NCY6 345 aa5.18□□□□□ -1.58
SMC5-203ENST00000475540 OR52B6Q8NGF0 335 aa5.18□□□□□ -1.58
SMC5-203ENST00000475540 CDHR1Q96JP9 859 aa5.18□□□□□ -1.58
SMC5-203ENST00000475540 NEDD4LQ96PU5 975 aa5.18□□□□□ -1.58
SMC5-203ENST00000475540 IL12RB2Q99665 862 aa5.18□□□□□ -1.58
SMC5-203ENST00000475540 FAM129AQ9BZQ8 928 aa5.18□□□□□ -1.58
SMC5-203ENST00000475540 GRPEL1Q9HAV7 217 aa5.18□□□□□ -1.58
SMC5-203ENST00000475540 THAP10Q9P2Z0 257 aaPredicted RBP5.18□□□□□ -1.58
SMC5-203ENST00000475540 POMT2Q9UKY4 750 aa5.18□□□□□ -1.58
SMC5-203ENST00000475540 ZNF510Q9Y2H8 683 aa5.18□□□□□ -1.58
SMC5-203ENST00000475540 COLEC10Q9Y6Z7 277 aa5.18□□□□□ -1.58
SMC5-203ENST00000475540 ANXA2P2A6NMY6 339 aa5.17□□□□□ -1.58
SMC5-203ENST00000475540 TMEM150CB9EJG8 249 aa5.17□□□□□ -1.58
SMC5-203ENST00000475540 G3V2L1 256 aa5.17□□□□□ -1.58
SMC5-203ENST00000475540 CCDC188H7C350 402 aa5.17□□□□□ -1.58
SMC5-203ENST00000475540 PRAF2O60831 178 aa5.17□□□□□ -1.58
SMC5-203ENST00000475540 QDPRP09417 244 aa5.17□□□□□ -1.58
SMC5-203ENST00000475540 FDPSP14324 419 aaKnown RBP5.17□□□□□ -1.58
SMC5-203ENST00000475540 DUTP33316 252 aaKnown RBP5.17□□□□□ -1.58
SMC5-203ENST00000475540 TNNT3P45378 269 aaPredicted RBP5.17□□□□□ -1.58
SMC5-203ENST00000475540 CLDN17P56750 224 aa5.17□□□□□ -1.58
SMC5-203ENST00000475540 KRTAP10-3P60369 221 aa5.17□□□□□ -1.58
SMC5-203ENST00000475540 KRTAP5-4Q6L8H1 288 aa5.17□□□□□ -1.58
SMC5-203ENST00000475540 ABI3BPQ7Z7G0 1075 aa5.17□□□□□ -1.58
SMC5-203ENST00000475540 PRUNE1Q86TP1 453 aa5.17□□□□□ -1.58
SMC5-203ENST00000475540 POM121L12Q8N7R1 296 aa5.17□□□□□ -1.58
SMC5-203ENST00000475540 KIF18AQ8NI77 898 aa5.17□□□□□ -1.58
SMC5-203ENST00000475540 GRK7Q8WTQ7 553 aa5.17□□□□□ -1.58
SMC5-203ENST00000475540 NAP1L5Q96NT1 182 aaPredicted RBP5.17□□□□□ -1.58
SMC5-203ENST00000475540 CHCHD5Q9BSY4 110 aa5.17□□□□□ -1.58
SMC5-203ENST00000475540 HEXA-AS1Q9H8Q6 139 aa5.17□□□□□ -1.58
SMC5-203ENST00000475540 POLKQ9UBT6 870 aa5.17□□□□□ -1.58
SMC5-203ENST00000475540 HEG1Q9ULI3 1381 aa5.16□□□□□ -1.58
SMC5-203ENST00000475540 hCG_38984A0A1B0GV85 526 aa5.16□□□□□ -1.58
SMC5-203ENST00000475540 TRAFD1O14545 582 aaPredicted RBP5.16□□□□□ -1.58
SMC5-203ENST00000475540 TLX2O43763 284 aaPredicted RBP5.16□□□□□ -1.58
SMC5-203ENST00000475540 SNAP91O60641 907 aa5.16□□□□□ -1.58
SMC5-203ENST00000475540 SRSF10O75494 262 aaKnown RBP5.16□□□□□ -1.58
SMC5-203ENST00000475540 NXPH4O95158 308 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms