RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 ZNF277Q9NRM2 450 aaPredicted RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 EXD2Q9NVH0 621 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 EVA1BQ9NVM1 165 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 BABAM2Q9NXR7 383 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 USP36Q9P275 1121 aaKnown RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 SLC2A6Q9UGQ3 507 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 EVLQ9UI08 416 aaPredicted RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 PPT2Q9UMR5 302 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 SPEF1Q9Y4P9 236 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 A0A0B4J203 849 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 CIB4A0PJX0 185 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 LCHNA4D1U4 455 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 ANGPT2O15123 496 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 TAPBPO15533 448 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 FGF16O43320 207 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 SUV39H1O43463 412 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 KIAA0513O60268 411 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 EIF1BO60739 113 aaKnown RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 CREG1O75629 220 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 SCO1O75880 301 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 PTBP3O95758 552 aaKnown RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 SOD1P00441 154 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 CD1AP06126 327 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 CYP4B1P13584 511 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 HNRNPLP14866 589 aaKnown RBP eCLIP3.95□□□□□ -1.78
USP16-205ENST00000474835 CBR1P16152 277 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 TYRP1P17643 537 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 LBPP18428 481 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 MPGP29372 298 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 C21orf33P30042 268 aaPredicted RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 PRDX3P30048 256 aaKnown RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 FMO4P31512 558 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 DNAJA1P31689 397 aaKnown RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 EIF1P41567 113 aaKnown RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 ARFIP1P53367 373 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 EPHA5P54756 1037 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 PITX1P78337 314 aaPredicted RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 ABRQ12979 859 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 ECH1Q13011 328 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 LCP2Q13094 533 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 GALEQ14376 348 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 TATDN3Q17R31 274 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 FAM26DQ5JW98 314 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 KIAA1211LQ6NV74 962 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 FIP1L1Q6UN15 594 aaKnown RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 USP45Q70EL2 814 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 EIF3MQ7L2H7 374 aaKnown RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 RAB43Q86YS6 212 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 PHC2Q8IXK0 858 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 NIM1KQ8IY84 436 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 MICU2Q8IYU8 434 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 TMEM132CQ8N3T6 1108 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 TMEM145Q8NBT3 493 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 ATAD1Q8NBU5 361 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 KBTBD8Q8NFY9 601 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 LRRN4Q8WUT4 740 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 NSUN5Q96P11 429 aaKnown RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 TRMT61BQ9BVS5 477 aaKnown RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 MRPL9Q9BYD2 267 aaKnown RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 TRIM8Q9BZR9 551 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 UPF3AQ9H1J1 476 aaKnown RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 C12orf4Q9NQ89 552 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 DCAF16Q9NXF7 216 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 STOML2Q9UJZ1 356 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 MGAT4AQ9UM21 535 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 EXOGQ9Y2C4 368 aaKnown RBP3.95□□□□□ -1.78
USP16-205ENST00000474835 TPRKBQ9Y3C4 175 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 ACTL7AQ9Y615 435 aa3.95□□□□□ -1.78
USP16-205ENST00000474835 SCN10AQ9Y5Y9 1956 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 UBA6A0AVT1 1052 aaPredicted RBP3.94□□□□□ -1.78
USP16-205ENST00000474835 AZIN1O14977 448 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 PSMD3O43242 534 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 SIGLEC6O43699 453 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 GATCO43716 136 aaKnown RBP3.94□□□□□ -1.78
USP16-205ENST00000474835 AIREO43918 545 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 TNFRSF21O75509 655 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 TGM6O95932 706 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 IFNB1P01574 187 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 IGLV3-27P01718 113 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 NR2F6P10588 404 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 SRCP12931 536 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 CPB1P15086 417 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 ERCC2P18074 760 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 CXCL2P19875 107 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 RAB3AP20336 220 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 MYL9P24844 172 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 XCR1P46094 333 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 CRKP46108 304 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 BRCC3P46736 316 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 DYNLT1P63172 113 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 SIM1P81133 766 aaPredicted RBP3.94□□□□□ -1.78
USP16-205ENST00000474835 MTMR1Q13613 665 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 KLF9Q13886 244 aaPredicted RBP3.94□□□□□ -1.78
USP16-205ENST00000474835 GNA13Q14344 377 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 NFE2L1Q14494 772 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 UBXN2BQ14CS0 331 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 VEPH1Q14D04 833 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 SF3A2Q15428 464 aaKnown RBP3.94□□□□□ -1.78
USP16-205ENST00000474835 GSG1Q2KHT4 349 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 TIMM50Q3ZCQ8 353 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms