RNA–Protein interactions for RNA: ENST00000474543.5

NELFCD-204, Transcript of negative elongation factor complex member C/D, human

TSL 5

Gene NELFCD, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NELFCD-204	ENST00000474543	SF1	Q15637	639 aa	Known RBP	13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543		Q6ZPB1	254 aa	Predicted RBP	13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	ADGRD2	Q7Z7M1	963 aa		13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	FAM124A	Q86V42	546 aa		13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	MAFA	Q8NHW3	353 aa	Predicted RBP	13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	PSMA8	Q8TAA3	256 aa		13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	SLC35B4	Q969S0	331 aa		13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	COPS4	Q9BT78	406 aa		13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	CHST8	Q9H2A9	424 aa		13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	ZBTB20	Q9HC78	741 aa	Predicted RBP	13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	TMPRSS11E	Q9UL52	423 aa		13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	IRAK3	Q9Y616	596 aa		13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	PABPN1L	A6NDY0	278 aa	Known RBP	13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	TMEM229A	B2RXF0	380 aa		13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	LHCGR	P22888	699 aa		13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	C21orf33	P30042	268 aa	Predicted RBP	13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	UGT2B10	P36537	528 aa		13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	CLK1	P49759	484 aa	Known RBP	13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	TUBA1B	P68363	451 aa		13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	CSTF3	Q12996	717 aa	Known RBP	13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	TUBA1A	Q71U36	451 aa		13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	LACC1	Q8IV20	430 aa		13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	ARL14EP	Q8N8R7	260 aa	Predicted RBP	13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	OR2AP1	Q8NGE2	309 aa		13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	CDC26	Q8NHZ8	85 aa		13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	WDR20	Q8TBZ3	569 aa		13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	FCGR1B	Q92637	280 aa		13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	SH3KBP1	Q96B97	665 aa		13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	KCNC2	Q96PR1	638 aa		13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	BBS2	Q9BXC9	721 aa		13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	EMILIN2	Q9BXX0	1053 aa		13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	VPS29	Q9UBQ0	182 aa		13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	PSORS1C1	Q9UIG5	152 aa		13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	SLCO3A1	Q9UIG8	710 aa		13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	FZD4	Q9ULV1	537 aa		13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	FAM32A	Q9Y421	112 aa	Known RBP	13.9	□□□□□ -0.18
NELFCD-204	ENST00000474543	METTL15	A6NJ78	407 aa		13.89	□□□□□ -0.19
NELFCD-204	ENST00000474543	SLC16A5	O15375	505 aa		13.89	□□□□□ -0.19
NELFCD-204	ENST00000474543	AIRE	O43918	545 aa		13.89	□□□□□ -0.19
NELFCD-204	ENST00000474543	CYP2A7	P20853	494 aa		13.89	□□□□□ -0.19
NELFCD-204	ENST00000474543	RRM2	P31350	389 aa		13.89	□□□□□ -0.19
NELFCD-204	ENST00000474543	C21orf58	P58505	322 aa		13.89	□□□□□ -0.19
NELFCD-204	ENST00000474543	IRF8	Q02556	426 aa		13.89	□□□□□ -0.19
NELFCD-204	ENST00000474543	LMAN2	Q12907	356 aa		13.89	□□□□□ -0.19
NELFCD-204	ENST00000474543	ZNF404	Q494X3	552 aa		13.89	□□□□□ -0.19
NELFCD-204	ENST00000474543	TSEN54	Q7Z6J9	526 aa	Known RBP	13.89	□□□□□ -0.19
NELFCD-204	ENST00000474543	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.89	□□□□□ -0.19
NELFCD-204	ENST00000474543	ARMC8	Q8IUR7	673 aa		13.89	□□□□□ -0.19
NELFCD-204	ENST00000474543	P3H2	Q8IVL5	708 aa		13.89	□□□□□ -0.19
NELFCD-204	ENST00000474543	PROX1	Q92786	737 aa		13.89	□□□□□ -0.19
NELFCD-204	ENST00000474543	MTERF1	Q99551	399 aa	Known RBP	13.89	□□□□□ -0.19
NELFCD-204	ENST00000474543	DUSP26	Q9BV47	211 aa		13.89	□□□□□ -0.19
NELFCD-204	ENST00000474543	MMP27	Q9H306	513 aa		13.89	□□□□□ -0.19
NELFCD-204	ENST00000474543	PLCXD1	Q9NUJ7	323 aa		13.89	□□□□□ -0.19
NELFCD-204	ENST00000474543	ABCB8	Q9NUT2	735 aa		13.89	□□□□□ -0.19
NELFCD-204	ENST00000474543	ANKMY1	Q9P2S6	941 aa		13.89	□□□□□ -0.19
NELFCD-204	ENST00000474543	PCDHGB3	Q9Y5G1	929 aa		13.89	□□□□□ -0.19
NELFCD-204	ENST00000474543	GPC6	Q9Y625	555 aa	Predicted RBP	13.89	□□□□□ -0.19
NELFCD-204	ENST00000474543	BRWD1	Q9NSI6	2320 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	HTR3E	A5X5Y0	456 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	SUV39H1	O43463	412 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	LILRB3	O75022	631 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	RFPL2	O75678	378 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	UPK1B	O75841	260 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	CD70	P32970	193 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	SLC19A1	P41440	591 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	GSS	P48637	474 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	AP1S2	P56377	157 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	ELP6	Q0PNE2	266 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	CDC20	Q12834	499 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	SP140	Q13342	867 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	PLEKHS1	Q5SXH7	462 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	LIPJ	Q5W064	366 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	SERPINA13P	Q6UXR4	307 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	LYSMD2	Q8IV50	215 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	FAM217A	Q8IXS0	508 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	MAL2	Q969L2	176 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	C11orf24	Q96F05	449 aa	Predicted RBP	13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	MAGEB10	Q96LZ2	347 aa	Predicted RBP	13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	SPATA9	Q9BWV2	254 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	RUBCNL	Q9H714	662 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	PRDM8	Q9NQV8	689 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	TMEM184C	Q9NVA4	438 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	RUVBL1	Q9Y265	456 aa	Known RBP	13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	PADI2	Q9Y2J8	665 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	SH3BP1	Q9Y3L3	701 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	ZNF451	Q9Y4E5	1061 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	C1orf226	A1L170	272 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	GABRR3	A8MPY1	467 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	SCAMP2	O15127	329 aa	Known RBP	13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	GCM2	O75603	506 aa	Predicted RBP	13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	MYO1D	O94832	1006 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	GADD45A	P24522	165 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	AQP1	P29972	269 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	GGT2	P36268	569 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	CTSK	P43235	329 aa		13.88	□□□□□ -0.19
NELFCD-204	ENST00000474543	STK19	P49842	368 aa	Predicted RBP	13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms