RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 ARCN1P48444 511 aaKnown RBP4.47□□□□□ -1.69
CCNL1-215ENST00000474539 PGDP52209 483 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 RAB25P57735 213 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 PCBD1P61457 104 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 DLX2Q07687 328 aaPredicted RBP4.47□□□□□ -1.69
CCNL1-215ENST00000474539 DBPQ10586 325 aaPredicted RBP4.47□□□□□ -1.69
CCNL1-215ENST00000474539 PWP1Q13610 501 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 SMCO1Q147U7 214 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 TERF2Q15554 542 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 TRAM1Q15629 374 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 FAM78AQ5JUQ0 283 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 TMEM201Q5SNT2 666 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 ARMC4Q5T2S8 1044 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 C16orf46Q6P387 395 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 GSPT2Q8IYD1 628 aaKnown RBP4.47□□□□□ -1.69
CCNL1-215ENST00000474539 LRRC25Q8N386 305 aaPredicted RBP4.47□□□□□ -1.69
CCNL1-215ENST00000474539 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.47□□□□□ -1.696e-8■□□□□ 8.3
CCNL1-215ENST00000474539 ZNF483Q8TF39 744 aaPredicted RBP4.47□□□□□ -1.69
CCNL1-215ENST00000474539 MYLIPQ8WY64 445 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 MVB12AQ96EY5 273 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 TGM7Q96PF1 710 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 NEDD4LQ96PU5 975 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 RBM4BQ9BQ04 359 aaKnown RBP4.47□□□□□ -1.69
CCNL1-215ENST00000474539 UTP23Q9BRU9 249 aaKnown RBP4.47□□□□□ -1.69
CCNL1-215ENST00000474539 RBM4Q9BWF3 364 aaKnown RBP4.47□□□□□ -1.69
CCNL1-215ENST00000474539 TMEM121BQ9BXQ6 578 aaPredicted RBP4.47□□□□□ -1.69
CCNL1-215ENST00000474539 RDH14Q9HBH5 336 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 C1GALT1Q9NS00 363 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 SPHK1Q9NYA1 384 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 MBD1Q9UIS9 605 aaPredicted RBP4.47□□□□□ -1.69
CCNL1-215ENST00000474539 IKZF3Q9UKT9 509 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 PADI1Q9ULC6 663 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 MYH3P11055 1940 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 NSG1A0A0A6YYJ2 146 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 UBE2QL1A1L167 161 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 FUOMA2VDF0 154 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 MAGEA13PA6NCF6 341 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 GRXCR2A6NFK2 248 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 TLCD2A6NGC4 264 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 FAM155AB1AL88 458 aaPredicted RBP4.46□□□□□ -1.69
CCNL1-215ENST00000474539 TEX46H3BTG2 121 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 RFPL3O75679 317 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 SERPINI2O75830 405 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 WNT11O96014 354 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 ACPPP15309 386 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 POLR2CP19387 275 aaPredicted RBP4.46□□□□□ -1.69
CCNL1-215ENST00000474539 MSX1P28360 303 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 HSPA7P48741 367 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 KLC1Q07866 573 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 POU4F2Q12837 409 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 COX10Q12887 443 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 TUBB3Q13509 450 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 RAB39AQ14964 217 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 CTC1Q2NKJ3 1217 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 IL23RQ5VWK5 629 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 KLHL17Q6TDP4 642 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 XKR5Q6UX68 686 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 VN1R5Q7Z5H4 357 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 TMEM17Q86X19 198 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 ZSWIM9Q86XI8 627 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 SLC43A2Q8N370 569 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 CADM2Q8N3J6 435 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 OR5L1Q8NGL2 311 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 GPR150Q8NGU9 434 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 FCGR1BQ92637 280 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 NACC2Q96BF6 587 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 RNF31Q96EP0 1072 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 NDNQ99608 321 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 USB1Q9BQ65 265 aaKnown RBP4.46□□□□□ -1.69
CCNL1-215ENST00000474539 CD244Q9BZW8 370 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 BRF2Q9HAW0 419 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 TRPV5Q9NQA5 729 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 DIABLOQ9NR28 239 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 TAS2R7Q9NYW3 318 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 FLRT1Q9NZU1 646 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 UTS2RQ9UKP6 389 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 KCNK6Q9Y257 313 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 SLC35A3Q9Y2D2 325 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 PLLPQ9Y342 182 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 SH3GLB1Q9Y371 365 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 EMC9Q9Y3B6 208 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 USP3Q9Y6I4 520 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 TIAM2Q8IVF5 1701 aa4.46□□□□□ -1.69
CCNL1-215ENST00000474539 TRBV23OR9-2A0A075B6M9 112 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 CCRL2O00421 344 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 SCGNO76038 276 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 CLDN7O95471 211 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 CPNE6O95741 557 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 PAK4O96013 591 aaPredicted RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 CSTBP04080 98 aaKnown RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 PORP16435 677 aaPredicted RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 ZNF20P17024 532 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 ZNF8P17098 575 aaPredicted RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 HTRA4P83105 476 aaPredicted RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 SLC10A7Q0GE19 358 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 TRIQKQ629K1 86 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 RASSF6Q6ZTQ3 369 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 OR10T2Q8NGX3 314 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 KLK6Q92876 244 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 FAM136AQ96C01 138 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms