RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 HCAR3P49019 387 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 GPR15P49685 360 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 MFAP4P55083 255 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 ARF6P62330 175 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 RAB11AP62491 216 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 FLI1Q01543 452 aaPredicted RBP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 POU4F1Q01851 419 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 SLC3A1Q07837 685 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 ACSM1Q08AH1 577 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 RAB11BQ15907 218 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 ZXDCQ2QGD7 858 aaPredicted RBP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 TRIM16LQ309B1 348 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 IQCCQ4KMZ1 466 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 IFI44LQ53G44 452 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 ANKS6Q68DC2 871 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 FAM151BQ6UXP7 276 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 SYT13Q7L8C5 426 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 CROCCP3Q8IVE0 287 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 OR10J5Q8NHC4 309 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 ABTB1Q969K4 478 aaPredicted RBP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 KRT12Q99456 494 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 ELF4Q99607 663 aaPredicted RBP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 GPA33Q99795 319 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 FAM110AQ9BQ89 295 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 ANKRD60Q9BZ19 345 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 DEFB129Q9H1M3 183 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 TP63Q9H3D4 680 aaPredicted RBP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 TMEM185BQ9H7F4 350 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 CSNK1G1Q9HCP0 422 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 MYOZ1Q9NP98 299 aaPredicted RBP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 ABCB10Q9NRK6 738 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 STARD10Q9Y365 291 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 EMC9Q9Y3B6 208 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 CORINQ9Y5Q5 1042 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 CNTNAP2Q9UHC6 1331 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 TEX15Q9BXT5 2789 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 ERI2A8K979 691 aaKnown RBP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 RNF13O43567 381 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 GLRA3O75311 464 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 STX11O75558 287 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 KDM4BO94953 1096 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 APOL3O95236 402 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 TIMP1P01033 207 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 GPIP06744 558 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 LYNP07948 512 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 XRCC1P18887 633 aaPredicted RBP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 CNR1P21554 472 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 UGT1A1P22309 533 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 WARSP23381 471 aaKnown RBP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 ITPKAP23677 461 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 TEAD1P28347 426 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 CDC25BP30305 580 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 CAPZBP47756 277 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 HK3P52790 923 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 AP2S1P53680 142 aaPredicted RBP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 NCKAP1LP55160 1127 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 JAM2P57087 298 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 RPS15P62841 145 aaKnown RBP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 SIM1P81133 766 aaPredicted RBP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 FAAP100Q0VG06 881 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 BST1Q10588 318 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 TMEM115Q12893 351 aaPredicted RBP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 STX3Q13277 289 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 ZNHIT3Q15649 155 aaPredicted RBP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 UGT3A2Q3SY77 523 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 KLHL22Q53GT1 634 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 TMEM41BQ5BJD5 291 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 SLC35F1Q5T1Q4 408 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 NHLRC1Q6VVB1 395 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 PRUNE1Q86TP1 453 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 SLCO6A1Q86UG4 719 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 FAM35AQ86V20 835 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 C12orf40Q86WS4 652 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 ADGRG5Q8IZF4 528 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 ABI1Q8IZP0 508 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 RNASE11Q8TAA1 199 aaKnown RBP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 GPBAR1Q8TDU6 330 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 ASAP3Q8TDY4 903 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 LPAR1Q92633 364 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 BORCS5Q969J3 196 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 EAF2Q96CJ1 260 aaPredicted RBP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 NUDT11Q96G61 164 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 HAPLN3Q96S86 360 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 VRK1Q99986 396 aaPredicted RBP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 HSD17B14Q9BPX1 270 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 SGPP1Q9BX95 441 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 RAB1BQ9H0U4 201 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 VCXQ9H320 206 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 GEMIN7Q9H840 131 aaKnown RBP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 CHMP1AQ9HD42 196 aaPredicted RBP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 XPNPEP1Q9NQW7 623 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 SLC25A10Q9UBX3 287 aaPredicted RBP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 RBMX2Q9Y388 322 aaKnown RBP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 DHRS7Q9Y394 339 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 SLC22A7Q9Y694 548 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 R4GN57 208 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 MGAMO43451 1857 aa5.85□□□□□ -1.47
SMARCE1-208ENST00000474246 PDS5AQ29RF7 1337 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms