RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 SLC45A3Q96JT2 553 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 NSUN5Q96P11 429 aaKnown RBP11.81□□□□□ -0.52
DDX56-209ENST00000473924 YIPF2Q9BWQ6 316 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 STMN4Q9H169 189 aaPredicted RBP11.81□□□□□ -0.52
DDX56-209ENST00000473924 C12orf65Q9H3J6 166 aaKnown RBP11.81□□□□□ -0.52
DDX56-209ENST00000473924 ACTL8Q9H568 366 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 ANKHQ9HCJ1 492 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 MKS1Q9NXB0 559 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 PADI2Q9Y2J8 665 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 SSUH2Q9Y2M2 353 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 PLLPQ9Y342 182 aa11.81□□□□□ -0.52
DDX56-209ENST00000473924 MRPS18BQ9Y676 258 aaKnown RBP11.81□□□□□ -0.52
DDX56-209ENST00000473924 ANKRD11Q6UB99 2663 aaPredicted RBP11.81□□□□□ -0.52
DDX56-209ENST00000473924 DMXL2Q8TDJ6 3036 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 ZNF891A8MT65 544 aaPredicted RBP11.8□□□□□ -0.52
DDX56-209ENST00000473924 G3V2L1 256 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 OR7A17O14581 309 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 TERTO14746 1132 aaKnown RBP11.8□□□□□ -0.52
DDX56-209ENST00000473924 CLEC3AO75596 197 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 CLDN9O95484 217 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 OTCP00480 354 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 SERPINA6P08185 405 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 IL1RNP18510 177 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 TSPAN8P19075 237 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 FBLP22087 321 aaKnown RBP11.8□□□□□ -0.52
DDX56-209ENST00000473924 F8A1P23610 371 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 HPDP32754 393 aaPredicted RBP11.8□□□□□ -0.52
DDX56-209ENST00000473924 PRKAA2P54646 552 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 CDH13P55290 713 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 STXBP1P61764 594 aaKnown RBP11.8□□□□□ -0.52
DDX56-209ENST00000473924 RPS18P62269 152 aaKnown RBP11.8□□□□□ -0.52
DDX56-209ENST00000473924 SKP1P63208 163 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 MC1RQ01726 317 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 PCDH1Q08174 1060 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 HERC3Q15034 1050 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 NCF4Q15080 339 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 TOR1AIP1Q5JTV8 583 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 ZNF678Q5SXM1 525 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 TTC19Q6DKK2 380 aaPredicted RBP11.8□□□□□ -0.52
DDX56-209ENST00000473924 RPS27LQ71UM5 84 aaKnown RBP11.8□□□□□ -0.52
DDX56-209ENST00000473924 OVCH1Q7RTY7 1134 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 CCNYL1Q8N7R7 359 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 OR52B6Q8NGF0 335 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 OR9A4Q8NGU2 314 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 TRPC4APQ8TEL6 797 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 ZNF483Q8TF39 744 aaPredicted RBP11.8□□□□□ -0.52
DDX56-209ENST00000473924 REPS1Q96D71 796 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 PGM2Q96G03 612 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 FAM111AQ96PZ2 611 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 CDK15Q96Q40 435 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 TMEM237Q96Q45 408 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 C1QTNF3Q9BXJ4 246 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 FAM117AQ9C073 453 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 COPG2Q9UBF2 871 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 ZNF490Q9ULM2 529 aaPredicted RBP11.8□□□□□ -0.52
DDX56-209ENST00000473924 MRPS2Q9Y399 296 aaKnown RBP11.8□□□□□ -0.52
DDX56-209ENST00000473924 PCDHGA6Q9Y5G7 932 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 PCDHGA11Q9Y5H2 935 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 SLC22A7Q9Y694 548 aa11.8□□□□□ -0.52
DDX56-209ENST00000473924 H0YIG0 161 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 K7ENP7 123 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 FOXS1O43638 330 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 CREG1O75629 220 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 NSA2O95478 260 aaKnown RBP11.79□□□□□ -0.52
DDX56-209ENST00000473924 ALBP02768 609 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 CAPN1P07384 714 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 ZNF888P0CJ79 500 aaPredicted RBP11.79□□□□□ -0.52
DDX56-209ENST00000473924 PRKAR1AP10644 381 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 CREB1P16220 341 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 ALOX12P18054 663 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 WT1P19544 449 aaPredicted RBP11.79□□□□□ -0.52
DDX56-209ENST00000473924 ITGAXP20702 1163 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 FOLR3P41439 243 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 PHEXP78562 749 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 OCA2Q04671 838 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 CLCQ05315 142 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 DDX39BQ13838 428 aaKnown RBP11.79□□□□□ -0.52
DDX56-209ENST00000473924 DSG2Q14126 1118 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 E2F2Q14209 437 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 CPSF6Q16630 551 aaKnown RBP eCLIP11.79□□□□□ -0.52
DDX56-209ENST00000473924 COL28A1Q2UY09 1125 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 UNC50Q53HI1 259 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 CFAP157Q5JU67 520 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 NIPAL1Q6NVV3 410 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 INO80CQ6PI98 192 aaPredicted RBP11.79□□□□□ -0.52
DDX56-209ENST00000473924 MILR1Q7Z6M3 343 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 SYVN1Q86TM6 617 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 EXOC3L1Q86VI1 746 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 LAS2Q8IYD9 372 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 ARHGEF39Q8N4T4 335 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 L3MBTL4Q8NA19 623 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 OR7G3Q8NG95 312 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 TCP10LQ8TDR4 215 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 CREB3L4Q8TEY5 395 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 FKBP10Q96AY3 582 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 L3HYPDHQ96EM0 354 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 FAR2Q96K12 515 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 MAGEB10Q96LZ2 347 aaPredicted RBP11.79□□□□□ -0.52
DDX56-209ENST00000473924 NTMT1Q9BV86 223 aa11.79□□□□□ -0.52
DDX56-209ENST00000473924 SLC6A16Q9GZN6 736 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms