RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-210ENST00000473311 GGTA1PQ4G0N0 100 aa13.51□□□□□ -0.25
ABCF3-210ENST00000473311 YIF1BQ5BJH7 314 aa13.51□□□□□ -0.25
ABCF3-210ENST00000473311 PDE12Q6L8Q7 609 aaKnown RBP13.51□□□□□ -0.25
ABCF3-210ENST00000473311 PRSS48Q7RTY5 328 aa13.51□□□□□ -0.25
ABCF3-210ENST00000473311 LHFPL5Q8TAF8 219 aa13.51□□□□□ -0.25
ABCF3-210ENST00000473311 ZHX1-C8orf76Q96EF9 292 aa13.51□□□□□ -0.25
ABCF3-210ENST00000473311 ELAC1Q9H777 363 aaKnown RBP13.51□□□□□ -0.25
ABCF3-210ENST00000473311 THUMPD1Q9NXG2 353 aaKnown RBP13.51□□□□□ -0.25
ABCF3-210ENST00000473311 ZDHHC3Q9NYG2 299 aa13.51□□□□□ -0.25
ABCF3-210ENST00000473311 GRIP1Q9Y3R0 1128 aa13.51□□□□□ -0.25
ABCF3-210ENST00000473311 ARPC4-TTLL3A0A0A6YYG9 625 aa13.51□□□□□ -0.25
ABCF3-210ENST00000473311 NPIPB15A6NHN6 443 aaPredicted RBP13.51□□□□□ -0.25
ABCF3-210ENST00000473311 COX7A2P14406 83 aa13.51□□□□□ -0.25
ABCF3-210ENST00000473311 PRPS1L1P21108 318 aa13.51□□□□□ -0.25
ABCF3-210ENST00000473311 BOP1Q14137 746 aaKnown RBP13.51□□□□□ -0.25
ABCF3-210ENST00000473311 ATP13A5Q4VNC0 1218 aa13.51□□□□□ -0.25
ABCF3-210ENST00000473311 FRG2Q64ET8 278 aa13.51□□□□□ -0.25
ABCF3-210ENST00000473311 DESI1Q6ICB0 168 aa13.51□□□□□ -0.25
ABCF3-210ENST00000473311 ZSWIM9Q86XI8 627 aa13.51□□□□□ -0.25
ABCF3-210ENST00000473311 CADM2Q8N3J6 435 aa13.51□□□□□ -0.25
ABCF3-210ENST00000473311 CSGALNACT1Q8TDX6 532 aa13.51□□□□□ -0.25
ABCF3-210ENST00000473311 FRG2BQ96QU4 278 aa13.51□□□□□ -0.25
ABCF3-210ENST00000473311 CITED4Q96RK1 184 aa13.51□□□□□ -0.25
ABCF3-210ENST00000473311 SLC22A12Q96S37 553 aa13.51□□□□□ -0.25
ABCF3-210ENST00000473311 PRM3Q9NNZ6 103 aa13.51□□□□□ -0.25
ABCF3-210ENST00000473311 ABCB10Q9NRK6 738 aa13.51□□□□□ -0.25
ABCF3-210ENST00000473311 ZNF106Q9H2Y7 1883 aaKnown RBP13.51□□□□□ -0.25
ABCF3-210ENST00000473311 CLK1P49759 484 aaKnown RBP13.5□□□□□ -0.25
ABCF3-210ENST00000473311 RACK1P63244 317 aaKnown RBP13.5□□□□□ -0.25
ABCF3-210ENST00000473311 RPP38P78345 283 aaKnown RBP13.5□□□□□ -0.25
ABCF3-210ENST00000473311 CREMQ03060 361 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 NPRL3Q12980 569 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 CAMK2GQ13555 558 aaPredicted RBP13.5□□□□□ -0.25
ABCF3-210ENST00000473311 UGT8Q16880 541 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 SYT16Q17RD7 645 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 ERICH5Q6P6B1 374 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 XKRXQ6PP77 449 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 CBLL1Q75N03 491 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 EIF3MQ7L2H7 374 aaKnown RBP13.5□□□□□ -0.25
ABCF3-210ENST00000473311 CCDC71Q8IV32 467 aaPredicted RBP13.5□□□□□ -0.25
ABCF3-210ENST00000473311 P3H2Q8IVL5 708 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 CLECL1Q8IZS7 167 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 SLIRPQ9GZT3 109 aaKnown RBP13.5□□□□□ -0.25
ABCF3-210ENST00000473311 ATG10Q9H0Y0 220 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 DSN1Q9H410 356 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 SIRT5Q9NXA8 310 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.5□□□□□ -0.25
ABCF3-210ENST00000473311 ANAPC1Q9H1A4 1944 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 EFCAB9A8MZ26 197 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 PCDHGA12O60330 932 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 SOCS5O75159 536 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 PRPH2P23942 346 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 AOAHP28039 575 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 SERPINA4P29622 427 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 B4GALNT1Q00973 533 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 CHIT1Q13231 466 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 DDX39BQ13838 428 aaKnown RBP13.5□□□□□ -0.25
ABCF3-210ENST00000473311 PROX2Q3B8N5 592 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 PLEKHG6Q3KR16 790 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 CDKL4Q5MAI5 379 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 CATSPEREQ5SY80 951 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 MSANTD1Q6ZTZ1 278 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 PTOV1Q86YD1 416 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 VPS37AQ8NEZ2 397 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 IL17RDQ8NFM7 739 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 TET1Q8NFU7 2136 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 BTBD2Q9BX70 525 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 SLC12A9Q9BXP2 914 aa13.5□□□□□ -0.25
ABCF3-210ENST00000473311 OR2A25A4D2G3 310 aa13.49□□□□□ -0.25
ABCF3-210ENST00000473311 PRAMEF4O60810 478 aa13.49□□□□□ -0.25
ABCF3-210ENST00000473311 IGSF6O95976 241 aa13.49□□□□□ -0.25
ABCF3-210ENST00000473311 SEMG1P04279 462 aa13.49□□□□□ -0.25
ABCF3-210ENST00000473311 OR56A5P0C7T3 313 aa13.49□□□□□ -0.25
ABCF3-210ENST00000473311 HTR3AP46098 478 aa13.49□□□□□ -0.25
ABCF3-210ENST00000473311 ITGA1P56199 1179 aa13.49□□□□□ -0.25
ABCF3-210ENST00000473311 SRSF11Q05519 484 aaKnown RBP13.49□□□□□ -0.25
ABCF3-210ENST00000473311 MTAPQ13126 283 aa13.49□□□□□ -0.25
ABCF3-210ENST00000473311 PRAMEF9Q5VWM5 478 aa13.49□□□□□ -0.25
ABCF3-210ENST00000473311 LRRC66Q68CR7 880 aa13.49□□□□□ -0.25
ABCF3-210ENST00000473311 GPR153Q6NV75 609 aa13.49□□□□□ -0.25
ABCF3-210ENST00000473311 RGMBQ6NW40 437 aa13.49□□□□□ -0.25
ABCF3-210ENST00000473311 CRTC1Q6UUV9 634 aa13.49□□□□□ -0.25
ABCF3-210ENST00000473311 CCBE1Q6UXH8 406 aaPredicted RBP13.49□□□□□ -0.25
ABCF3-210ENST00000473311 NPAS4Q8IUM7 802 aa13.49□□□□□ -0.25
ABCF3-210ENST00000473311 CBARPQ8N350 705 aaPredicted RBP13.49□□□□□ -0.25
ABCF3-210ENST00000473311 L3MBTL4Q8NA19 623 aa13.49□□□□□ -0.25
ABCF3-210ENST00000473311 MCFD2Q8NI22 146 aa13.49□□□□□ -0.25
ABCF3-210ENST00000473311 IPCEF1Q8WWN9 437 aaPredicted RBP13.49□□□□□ -0.25
ABCF3-210ENST00000473311 EPS8L2Q9H6S3 715 aa13.49□□□□□ -0.25
ABCF3-210ENST00000473311 DNAJC11Q9NVH1 559 aa13.49□□□□□ -0.25
ABCF3-210ENST00000473311 ADPRHL2Q9NX46 363 aa13.49□□□□□ -0.25
ABCF3-210ENST00000473311 SLC9A3R1O14745 358 aaPredicted RBP13.49□□□□□ -0.25
ABCF3-210ENST00000473311 NOS1APO75052 506 aaPredicted RBP13.49□□□□□ -0.25
ABCF3-210ENST00000473311 WBP4O75554 376 aaKnown RBP13.49□□□□□ -0.25
ABCF3-210ENST00000473311 GPX2P18283 190 aa13.49□□□□□ -0.25
ABCF3-210ENST00000473311 AQP1P29972 269 aa13.49□□□□□ -0.25
ABCF3-210ENST00000473311 TGFBR2P37173 567 aa13.49□□□□□ -0.25
ABCF3-210ENST00000473311 HTR2BP41595 481 aa13.49□□□□□ -0.25
ABCF3-210ENST00000473311 CBX5P45973 191 aa13.49□□□□□ -0.25
ABCF3-210ENST00000473311 MAPK8P45983 427 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms