RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, human

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR4-208	ENST00000471880	KCNC4	Q03721	635 aa		14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	SLBP	Q14493	270 aa	Known RBP eCLIP	14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	ZKSCAN8	Q15776	578 aa	Predicted RBP	14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	DEFB134	Q4QY38	66 aa		14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	UBAP2	Q5T6F2	1119 aa	Known RBP	14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	VWA5B1	Q5TIE3	1220 aa		14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	TAOK1	Q7L7X3	1001 aa		14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	ZC3H7A	Q8IWR0	971 aa	Known RBP	14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	IFT20	Q8IY31	132 aa		14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	OR11G2	Q8NGC1	345 aa		14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	OR51Q1	Q8NH59	317 aa		14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	STAG3L4	Q8TBR4	150 aa		14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	KCTD4	Q8WVF5	259 aa		14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	PEX11G	Q96HA9	241 aa		14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	FAM129A	Q9BZQ8	928 aa		14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	SLAMF7	Q9NQ25	335 aa		14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	SNX15	Q9NRS6	342 aa		14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	ZFP69B	Q9UJL9	534 aa		14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	NFU1	Q9UMS0	254 aa		14.03	□□□□□ -0.16
SSR4-208	ENST00000471880	FLNC	Q14315	2725 aa		14.02	□□□□□ -0.16
SSR4-208	ENST00000471880	FLNB	O75369	2602 aa	Known RBP	14.02	□□□□□ -0.16
SSR4-208	ENST00000471880		A0A087X1B8	175 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	UBXN8	O00124	270 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	KLHL41	O60662	606 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	STK16	O75716	305 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	CEACAM4	O75871	244 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	IPO13	O94829	963 aa	Known RBP	14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	WISP1	O95388	367 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	B3GALT4	O96024	378 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	C1GALT1C1L	P0DN25	315 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	SCTR	P47872	440 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	SERPINB8	P50452	374 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	RAB8A	P61006	207 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	SKP1	P63208	163 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	HERC3	Q15034	1050 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	IGFBP7	Q16270	282 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	TOR1AIP1	Q5JTV8	583 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	SULT1C3	Q6IMI6	304 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	KLC3	Q6P597	504 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	ABHD13	Q7L211	337 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	KRT78	Q8N1N4	520 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	EFCAB3	Q8N7B9	438 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	TRPV3	Q8NET8	790 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	OR4K1	Q8NGD4	311 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	TM9SF4	Q92544	642 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	KIAA1191	Q96A73	305 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	NACC2	Q96BF6	587 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	NXNL1	Q96CM4	212 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	TM4SF19	Q96DZ7	209 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	MAGEB10	Q96LZ2	347 aa	Predicted RBP	14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	TMEM79	Q9BSE2	394 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	RHBG	Q9H310	441 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	ACSS3	Q9H6R3	686 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	ANGPTL3	Q9Y5C1	460 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	PCDHGB7	Q9Y5F8	929 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	UBR5	O95071	2799 aa	Predicted RBP	14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	DOPEY2	Q9Y3R5	2298 aa		14.02	□□□□□ -0.17
SSR4-208	ENST00000471880	RP1L1	Q8IWN7	2480 aa	Predicted RBP	14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	IGLV3-12	A0A075B6K2	115 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880		A0A096LPK6	155 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	URAD	A6NGE7	173 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	ANKDD1B	A6NHY2	528 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	TAPBP	O15533	448 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	WISP3	O95389	354 aa	Predicted RBP	14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	BMP10	O95393	424 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	HP	P00738	406 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	C2	P06681	752 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	C8orf89	P0DMQ9	161 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	GFAP	P14136	432 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	ALOX12	P18054	663 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	MSH2	P43246	934 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	SLC6A12	P48065	614 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	DLG1	Q12959	904 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	PWP1	Q13610	501 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	PDK4	Q16654	411 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	FAM83E	Q2M2I3	478 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	XKR6	Q5GH73	641 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	LINC00696	Q6ZRV3	163 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	PDSS2	Q86YH6	399 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	MYLK4	Q86YV6	388 aa	Predicted RBP	14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	ARHGEF39	Q8N4T4	335 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	ANKRD53	Q8N9V6	530 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	OR5T3	Q8NGG3	340 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	FAR2	Q96K12	515 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	SCYL1	Q96KG9	808 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	CNDP1	Q96KN2	507 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	UBXN10	Q96LJ8	280 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	CAPS2	Q9BXY5	557 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	LHPP	Q9H008	270 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	ILKAP	Q9H0C8	392 aa	Predicted RBP	14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	NUDT4	Q9NZJ9	180 aa		14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	SETX	Q7Z333	2677 aa	Known RBP	14.01	□□□□□ -0.17
SSR4-208	ENST00000471880	SPEN	Q96T58	3664 aa	Known RBP	14	□□□□□ -0.17
SSR4-208	ENST00000471880		A0A087WUV0	522 aa	Predicted RBP	14	□□□□□ -0.17
SSR4-208	ENST00000471880	IGHV3-20	A0A0C4DH32	117 aa		14	□□□□□ -0.17
SSR4-208	ENST00000471880		A0A0G2JN53	185 aa		14	□□□□□ -0.17
SSR4-208	ENST00000471880	OR2W5	A6NFC9	320 aa		14	□□□□□ -0.17
SSR4-208	ENST00000471880	PSMD12	O00232	456 aa	Predicted RBP	14	□□□□□ -0.17
SSR4-208	ENST00000471880	AHR	P35869	848 aa		14	□□□□□ -0.17

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