RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 SCAMP2O15127 329 aaKnown RBP18.14■□□□□ 0.5
SMC4-209ENST00000468653 YY2O15391 372 aa18.14■□□□□ 0.5
SMC4-209ENST00000468653 NDUFS4O43181 175 aa18.14■□□□□ 0.5
SMC4-209ENST00000468653 GSTM2P28161 218 aa18.14■□□□□ 0.5
SMC4-209ENST00000468653 AHRP35869 848 aa18.14■□□□□ 0.5
SMC4-209ENST00000468653 MS4A2Q01362 244 aa18.14■□□□□ 0.5
SMC4-209ENST00000468653 RCN1Q15293 331 aa18.14■□□□□ 0.5
SMC4-209ENST00000468653 OR4F3Q6IEY1 312 aa18.14■□□□□ 0.5
SMC4-209ENST00000468653 MSANTD1Q6ZTZ1 278 aa18.14■□□□□ 0.5
SMC4-209ENST00000468653 PAGE2Q7Z2X7 111 aa18.14■□□□□ 0.5
SMC4-209ENST00000468653 TRIM73Q86UV7 250 aa18.14■□□□□ 0.5
SMC4-209ENST00000468653 WDR5BQ86VZ2 330 aa18.14■□□□□ 0.5
SMC4-209ENST00000468653 DNAJB8Q8NHS0 232 aa18.14■□□□□ 0.5
SMC4-209ENST00000468653 SLC26A7Q8TE54 656 aa18.14■□□□□ 0.5
SMC4-209ENST00000468653 CREB3L4Q8TEY5 395 aa18.14■□□□□ 0.5
SMC4-209ENST00000468653 C16orf78Q8WTQ4 265 aa18.14■□□□□ 0.5
SMC4-209ENST00000468653 RGMAQ96B86 450 aa18.14■□□□□ 0.5
SMC4-209ENST00000468653 SORBS1Q9BX66 1292 aaKnown RBP18.14■□□□□ 0.5
SMC4-209ENST00000468653 TRIM8Q9BZR9 551 aa18.14■□□□□ 0.5
SMC4-209ENST00000468653 NKX1-2Q9UD57 310 aaPredicted RBP18.14■□□□□ 0.5
SMC4-209ENST00000468653 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.14■□□□□ 0.5
SMC4-209ENST00000468653 PCDHGA2Q9Y5H1 932 aa18.14■□□□□ 0.5
SMC4-209ENST00000468653 COL6A3P12111 3177 aa18.14■□□□□ 0.5
SMC4-209ENST00000468653 CACNA1IQ9P0X4 2223 aa18.14■□□□□ 0.49
SMC4-209ENST00000468653 ARHGAP10A1A4S6 786 aa18.14■□□□□ 0.49
SMC4-209ENST00000468653 AQP9O43315 295 aa18.14■□□□□ 0.49
SMC4-209ENST00000468653 FKBP6O75344 327 aa18.14■□□□□ 0.49
SMC4-209ENST00000468653 ATXN3P54252 364 aaPredicted RBP18.14■□□□□ 0.49
SMC4-209ENST00000468653 TEAD4Q15561 434 aa18.14■□□□□ 0.49
SMC4-209ENST00000468653 SPATS1Q496A3 300 aa18.14■□□□□ 0.49
SMC4-209ENST00000468653 CCNYL2Q5T2Q4 361 aa18.14■□□□□ 0.49
SMC4-209ENST00000468653 ANKRD46Q86W74 232 aa18.14■□□□□ 0.49
SMC4-209ENST00000468653 PAQR7Q86WK9 346 aa18.14■□□□□ 0.49
SMC4-209ENST00000468653 ZNF761Q86XN6 746 aaPredicted RBP18.14■□□□□ 0.49
SMC4-209ENST00000468653 TMEM132CQ8N3T6 1108 aa18.14■□□□□ 0.49
SMC4-209ENST00000468653 ENDOVQ8N8Q3 282 aaKnown RBP18.14■□□□□ 0.49
SMC4-209ENST00000468653 AVL9Q8NBF6 648 aa18.14■□□□□ 0.49
SMC4-209ENST00000468653 MFSD9Q8NBP5 474 aa18.14■□□□□ 0.49
SMC4-209ENST00000468653 TRPV3Q8NET8 790 aa18.14■□□□□ 0.49
SMC4-209ENST00000468653 FLVCR1-AS1Q8TAF5 88 aa18.14■□□□□ 0.49
SMC4-209ENST00000468653 QRFPRQ96P65 431 aa18.14■□□□□ 0.49
SMC4-209ENST00000468653 SARGQ9BW04 601 aa18.14■□□□□ 0.49
SMC4-209ENST00000468653 REXO4Q9GZR2 422 aaKnown RBP18.14■□□□□ 0.49
SMC4-209ENST00000468653 TWSG1Q9GZX9 223 aa18.14■□□□□ 0.49
SMC4-209ENST00000468653 KCNH6Q9H252 994 aa18.14■□□□□ 0.49
SMC4-209ENST00000468653 MYNNQ9NPC7 610 aa18.14■□□□□ 0.49
SMC4-209ENST00000468653 PRMT8Q9NR22 394 aaPredicted RBP18.14■□□□□ 0.49
SMC4-209ENST00000468653 HRASLS2Q9NWW9 162 aa18.14■□□□□ 0.49
SMC4-209ENST00000468653 AP1M2Q9Y6Q5 423 aa18.14■□□□□ 0.49
SMC4-209ENST00000468653 GABRR3A8MPY1 467 aa18.13■□□□□ 0.49
SMC4-209ENST00000468653 BCAS2O75934 225 aaPredicted RBP18.13■□□□□ 0.49
SMC4-209ENST00000468653 STAMBPO95630 424 aa18.13■□□□□ 0.49
SMC4-209ENST00000468653 HOXB3P14651 431 aaPredicted RBP18.13■□□□□ 0.49
SMC4-209ENST00000468653 DHPSP49366 369 aaPredicted RBP18.13■□□□□ 0.49
SMC4-209ENST00000468653 MAZP56270 477 aaKnown RBP18.13■□□□□ 0.49
SMC4-209ENST00000468653 TAS2R50P59544 299 aa18.13■□□□□ 0.49
SMC4-209ENST00000468653 CYP4F3Q08477 520 aa18.13■□□□□ 0.49
SMC4-209ENST00000468653 TRAP1Q12931 704 aaKnown RBP18.13■□□□□ 0.49
SMC4-209ENST00000468653 BIRC2Q13490 618 aa18.13■□□□□ 0.49
SMC4-209ENST00000468653 TJAP1Q5JTD0 557 aa18.13■□□□□ 0.49
SMC4-209ENST00000468653 CPTPQ5TA50 214 aa18.13■□□□□ 0.49
SMC4-209ENST00000468653 ANKRD26P1Q6NSI1 321 aa18.13■□□□□ 0.49
SMC4-209ENST00000468653 DNAJC14Q6Y2X3 702 aaPredicted RBP18.13■□□□□ 0.49
SMC4-209ENST00000468653 ZNF548Q8NEK5 533 aaPredicted RBP18.13■□□□□ 0.49
SMC4-209ENST00000468653 BHLHE22Q8NFJ8 381 aaPredicted RBP18.13■□□□□ 0.49
SMC4-209ENST00000468653 OR8J2Q8NGG1 315 aa18.13■□□□□ 0.49
SMC4-209ENST00000468653 PCDHAC1Q9H158 963 aa18.13■□□□□ 0.49
SMC4-209ENST00000468653 SPAG17Q6Q759 2223 aa18.13■□□□□ 0.49
SMC4-209ENST00000468653 RTCAO00442 366 aaKnown RBP18.12■□□□□ 0.49
SMC4-209ENST00000468653 ACOT8O14734 319 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 CAPN5O15484 640 aaPredicted RBP18.12■□□□□ 0.49
SMC4-209ENST00000468653 DFNA5O60443 496 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 ERN1O75460 977 aaKnown RBP18.12■□□□□ 0.49
SMC4-209ENST00000468653 ANXA6P08133 673 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 HSD17B1P14061 328 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 BSGP35613 385 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 RPL3P39023 403 aaKnown RBP18.12■□□□□ 0.49
SMC4-209ENST00000468653 AP2B1P63010 937 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 C2orf80Q0P641 193 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 ZIC1Q15915 447 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 TMEM35AQ53FP2 167 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 LYSMD4Q5XG99 296 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 ARMC6Q6NXE6 501 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 AAGABQ6PD74 315 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 R3HCC1LQ7Z5L2 792 aaKnown RBP18.12■□□□□ 0.49
SMC4-209ENST00000468653 OOSP2Q86WS3 158 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 SDR16C5Q8N3Y7 309 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 NELL1Q92832 810 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 DUSP26Q9BV47 211 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 REEP4Q9H6H4 257 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 FAM120CQ9NX05 1096 aaKnown RBP18.12■□□□□ 0.49
SMC4-209ENST00000468653 VAPAQ9P0L0 249 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 SH3BP4Q9P0V3 963 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 MAN2B2Q9Y2E5 1009 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 PCDHGA4Q9Y5G9 962 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 A0A096LPI6 279 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 LRIT2A6NDA9 550 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 RFXANKO14593 260 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 TNFSF14O43557 240 aa18.12■□□□□ 0.49
SMC4-209ENST00000468653 SDC3O75056 442 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms