RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 MAP7Q14244 749 aa10.75□□□□□ -0.69
MSH5-214ENST00000468602 CPSF6Q16630 551 aaKnown RBP eCLIP10.75□□□□□ -0.69
MSH5-214ENST00000468602 FAM214AQ32MH5 1076 aa10.75□□□□□ -0.69
MSH5-214ENST00000468602 DEPDC1Q5TB30 811 aa10.75□□□□□ -0.69
MSH5-214ENST00000468602 FRMPD2BQ6IN97 320 aa10.75□□□□□ -0.69
MSH5-214ENST00000468602 ZNF517Q6ZMY9 492 aaPredicted RBP10.75□□□□□ -0.69
MSH5-214ENST00000468602 RAB11FIP2Q7L804 512 aa10.75□□□□□ -0.69
MSH5-214ENST00000468602 ASPGQ86U10 573 aa10.75□□□□□ -0.69
MSH5-214ENST00000468602 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.75□□□□□ -0.69
MSH5-214ENST00000468602 ZNF781Q8N8C0 355 aa10.75□□□□□ -0.69
MSH5-214ENST00000468602 DYDC1Q8WWB3 177 aa10.75□□□□□ -0.69
MSH5-214ENST00000468602 SLC13A3Q8WWT9 602 aa10.75□□□□□ -0.69
MSH5-214ENST00000468602 CMTM7Q96FZ5 175 aa10.75□□□□□ -0.69
MSH5-214ENST00000468602 FCRL1Q96LA6 429 aa10.75□□□□□ -0.69
MSH5-214ENST00000468602 CDK15Q96Q40 435 aa10.75□□□□□ -0.69
MSH5-214ENST00000468602 SERPINI1Q99574 410 aa10.75□□□□□ -0.69
MSH5-214ENST00000468602 ASPSCR1Q9BZE9 553 aa10.75□□□□□ -0.69
MSH5-214ENST00000468602 MEAF6Q9HAF1 191 aa10.75□□□□□ -0.69
MSH5-214ENST00000468602 DMRT3Q9NQL9 472 aa10.75□□□□□ -0.69
MSH5-214ENST00000468602 NMRK1Q9NWW6 199 aa10.75□□□□□ -0.69
MSH5-214ENST00000468602 SOHLH2Q9NX45 425 aa10.75□□□□□ -0.69
MSH5-214ENST00000468602 ADAM29Q9UKF5 820 aa10.75□□□□□ -0.69
MSH5-214ENST00000468602 SRPK3Q9UPE1 567 aa10.75□□□□□ -0.69
MSH5-214ENST00000468602 KLHL20Q9Y2M5 609 aa10.75□□□□□ -0.69
MSH5-214ENST00000468602 LOC105369274A0A096LPK9 316 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 LOC102723532A0A0G2JNH3 316 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 A0A0J9YVX5 310 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 HDAC3O15379 428 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 NVLO15381 856 aaKnown RBP10.74□□□□□ -0.69
MSH5-214ENST00000468602 PRAMEF10O60809 474 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 SHOX2O60902 331 aaPredicted RBP10.74□□□□□ -0.69
MSH5-214ENST00000468602 VPS4BO75351 444 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 RSL1D1O76021 490 aaKnown RBP10.74□□□□□ -0.69
MSH5-214ENST00000468602 CHEK2O96017 543 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 SLC35G6P0C7Q6 338 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 PRR35P0CG20 571 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 CD82P27701 267 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 HMOX2P30519 316 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 CCR10P46092 362 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 GSTM5P46439 218 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 ARL4DP49703 201 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 STXBP1P61764 594 aaKnown RBP10.74□□□□□ -0.69
MSH5-214ENST00000468602 IRX1P78414 480 aaPredicted RBP10.74□□□□□ -0.69
MSH5-214ENST00000468602 GUCY1A3Q02108 690 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 TUBB3Q13509 450 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 GRM7Q14831 915 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 SH2D4BQ5SQS7 431 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 WASHC2DQ5SRD0 308 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 PHF19Q5T6S3 580 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 KHDRBS2Q5VWX1 349 aaKnown RBP10.74□□□□□ -0.69
MSH5-214ENST00000468602 RHBDD2Q6NTF9 364 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 CEACAM20Q6UY09 585 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 CHSY3Q70JA7 882 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 PPP1R3BQ86XI6 285 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 CRLF3Q8IUI8 442 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 PARP9Q8IXQ6 854 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 OR4N4Q8N0Y3 316 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 CDYL2Q8N8U2 506 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 RCBTB1Q8NDN9 531 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 OR2L5Q8NG80 312 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 OR1L3Q8NH93 324 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 GAL3ST3Q96A11 431 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 RERGQ96A58 199 aaPredicted RBP10.74□□□□□ -0.69
MSH5-214ENST00000468602 TAAR9Q96RI9 348 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 DPH2Q9BQC3 489 aaPredicted RBP10.74□□□□□ -0.69
MSH5-214ENST00000468602 NLNQ9BYT8 704 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 ROGDIQ9GZN7 287 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 AICDAQ9GZX7 198 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 TUBB1Q9H4B7 451 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 ELOVL6Q9H5J4 265 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 PRDM9Q9NQV7 894 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 OCIAD1Q9NX40 245 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 KLHL3Q9UH77 587 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 RARRES3Q9UL19 164 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 WBP11Q9Y2W2 641 aaKnown RBP10.74□□□□□ -0.69
MSH5-214ENST00000468602 LOXL2Q9Y4K0 774 aa10.74□□□□□ -0.69
MSH5-214ENST00000468602 TMEM184BQ9Y519 407 aaPredicted RBP10.74□□□□□ -0.69
MSH5-214ENST00000468602 FEZF1A0PJY2 475 aa10.73□□□□□ -0.69
MSH5-214ENST00000468602 DCDC2BA2VCK2 349 aa10.73□□□□□ -0.69
MSH5-214ENST00000468602 EFCAB7A8K855 629 aa10.73□□□□□ -0.69
MSH5-214ENST00000468602 A8MU76 341 aa10.73□□□□□ -0.69
MSH5-214ENST00000468602 MAGEB17A8MXT2 336 aa10.73□□□□□ -0.69
MSH5-214ENST00000468602 CDRT15L2A8MXV6 281 aa10.73□□□□□ -0.69
MSH5-214ENST00000468602 H0YIG0 161 aa10.73□□□□□ -0.69
MSH5-214ENST00000468602 SLC28A1O00337 649 aa10.73□□□□□ -0.69
MSH5-214ENST00000468602 LYPLA1O75608 230 aaPredicted RBP10.73□□□□□ -0.69
MSH5-214ENST00000468602 NSA2O95478 260 aaKnown RBP10.73□□□□□ -0.69
MSH5-214ENST00000468602 PDYNP01213 254 aa10.73□□□□□ -0.69
MSH5-214ENST00000468602 TSPAN8P19075 237 aa10.73□□□□□ -0.69
MSH5-214ENST00000468602 MPSTP25325 297 aa10.73□□□□□ -0.69
MSH5-214ENST00000468602 MRPL19P49406 292 aaKnown RBP10.73□□□□□ -0.69
MSH5-214ENST00000468602 SEPHS1P49903 392 aa10.73□□□□□ -0.69
MSH5-214ENST00000468602 MEF2AQ02078 507 aaPredicted RBP10.73□□□□□ -0.69
MSH5-214ENST00000468602 RGS1Q08116 209 aa10.73□□□□□ -0.69
MSH5-214ENST00000468602 TBL3Q12788 808 aaKnown RBP10.73□□□□□ -0.69
MSH5-214ENST00000468602 TARDBPQ13148 414 aaKnown RBP eCLIP10.73□□□□□ -0.69
MSH5-214ENST00000468602 ABRAXAS2Q15018 415 aa10.73□□□□□ -0.69
MSH5-214ENST00000468602 HERC3Q15034 1050 aa10.73□□□□□ -0.69
MSH5-214ENST00000468602 KIAA0040Q15053 153 aa10.73□□□□□ -0.69
MSH5-214ENST00000468602 NDUFA9Q16795 377 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms